Papo024056.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Parnassius apollo
Gene Symbol
Armc5
Assembly
GCA_907164705.1
Location
CAJQZP010001455.1:2596-38072[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4e-07 0.00018 22.3 0.8 13 106 909 1012 908 1016 0.82

Sequence Information

Coding Sequence
atggATAAAACTTACATCAAATCGACTATAGAGGGTCTGAAATCTACAGCATCAAGTCGTATTCAAGACAGTCTTTTgaagataaaaaataatgttatttcaaACGACAGGGGTTTGAAATTATTTAGAGATTGTGGGGGTTTAGATAATTTAATACCACATCTCCGTAAACCTAACGAAAGAATTCTTGATATAACATTAAGCATACTTGGTAATTGCTGTTTAGACGAAAAAAGTAGTCTTATGgtTGGTAAATTGAATAGTTTTGGCCCATTAGTATCTATATTGAAGACGGTATGTAGGGATAGTATCTTAGGAAGGACCTGCAGACTAATGGGGAATTTAGCACAGAGGTATTCTAATGCTGAAGGCTTACACAACCATGGTGCTGTTGCTGCACTTGTTGCCTTGATTGAAAGTAGAGACAAAACCACCTCACATGCTACTTTGACAATGGCTGTAAGAGCAATCAgGCAACTATGGATGGTAACAGACAAGAGAGATGAAATGCTTAGTTTAAATGCTGTGAGGTGCATTGTTATTCTGTTAATTATGCAATGTGAATCTGTTGGTATTATGAAATCATCCAACCCTGAAAAAGAATTGGAAGAGCTAAAAAGAAGCCAAGAAGAacttattactggtattttaaaatgtttgggCTATTTTACTACATATGCAAATCCACATTGTGCAGAGCAgATACAAGGTGATGGTAGGGGTTACCAGTGTCTAGTAGCTCTAACAAAGAGATATGAATCAGTTTCactaaaatgtttaataaatctTTGTTATGTTTCATCCTGTCGCCCACTTTTGGGTACAGCAGGCCTTGTTGAGTGTTTGGTTGGCATTTTACAAAAACTTTCAGATGTGGCGTGGTGGCCTGAGGGAGCGGCAAAAGCTCTTGCTCAATTAAGTGGTGAATCTGTTAATAGATCTCGATTACGTCATTGTGGTGGTTTGGCGTTGTTAGTTGCCGCGGCACGCGTTAATTCGTATGCCATGCACGCATTATTACAATATGTTTTTGATGACTCATCATTTCAGATTCTCGTTAACGAGGGTCTTATTAGTTTGCTCACTGATAAGTTAACTAATTACCTGAAAACTATGGACTTTGAACACAACAATTTAGAAAAAGTCGACGTAGTGTTTGAAACAACAAAAGTAATGGAATTAAGAGAAAAAACTATAGATTGTACTAATTCCTTAAAACAAAATCCTACTGAACAACCAAATGATAGCTGCCATATAGAAGGAAAAGGTTTATTATTGAGACGCAAAGGTCAGTTAGCGTCTAAAAACGGCGATGAGCTAAAAGTGGTAATAGAAAGGGACAATATGATAGTTGGATTTGTGGATGCTATTGATAGTGATGCCACAGATGACAGTCAAAGTGAAGATGAAAATCAAACAAGGCGTAAATGTCTTAAAAGAGCTAGATCGGGTAGtcctaaatttttaaaaaacAAGTCGCAACTCATTAAAATGGCGAGCAGAGATTGGTCGGCCGGTGTTTATTGGGAACCAAAAAGTCCTGAATGGCCAGTTAACTCACAGTCACAAGTTGCTATGAGTCCGGATCGAACTGATCGAATTCCCTTATCTCCATATTCGGACGGCAATCGATCTGGATTTAGCCCAGAATACAGAGGATACTCTTCAAGCAAAAGGGCGCGATGGGATTGGAGTCCTGAGTCGAATACTAGTGCGGGTGAAGGTAGTTCGGCGTCGCCGTATTGGACTGAGTATCAGTGGAGTCCATCTAGTTCGACAAGTCCTACTTCACCATTTAGTGTCAATGAAGatagttCCGATTCTGAGATCTCGGGCCGGTACTCGCCGGTATGCAGCGAAGCGGACGGTGAAACCGAGGATAGAGCGGTTAATCTGACAACAAGTGATAAAGTACTCGAATTTGACGCCACCCAAGTAGCCCATGATTTGGACGAGCTCATTATGGATGATGATGAAAGTGTTGATGGAGAAGGGACGTCAGAAGAGGATCCTAATAACATCGATGTCAACACAAAATCGTCGAGTATAGCCTGTGTCCTGGTTTTGCTATTCCGTGTATCTCACGGTGCTTGCACGTACGGCAGTATCCGTGAAGAAGCAGTTCCGAATCACACGTTAGATTTGCTTACTGGTCGAGAATGTCTCAATGCTTTATTGGATTATGTTGAAAGATGTAAGAGACCATTAGGCAGGGCTGCTCGAATACTCGCCAGAGTATTAAGCAATGCTTTGTGTCTAATGAGTATATTAAAACACAGATTAGCACTTAGATTACATAATATGTCTATCAGCTCCAAACACCCGCCAACTAAATGTCAGCAATGTAAACAGATTATAAGGTTAAGTGTAAAATTGCTTGCTCAATTGACTATACTAGCAGAATCCAGCTTTGGAATCGGAGAGATAAGCTATCAACTACTTAAAGGTAGCTCATCCATGAAACAAACTCTGTCATTAACACTGCCTTATATAGTGAAAACCGAGAAACCTTTAAAGAAGTACTTTATAGATTGCAGTGCAttaaatcttttatttaatataatttctgaATCCAGAGAAGATATGCAAGACTGTGTTACAGCTTTGGTTAAATTAGCGAATAATGTACATATTAAAGACCCAAAAATATTAGAGAACCgatttaaagataaaatatttgttagttaTGATCCAATACTAGACAATTTAGCCGTAGATGAAATCGTTACTTTCGAATTAGATGACTTGTCAATGGTGAAAGCTAACAAAGTGTTCCTCTGTCAGAACTCTGATGTATTTAGCGCAATGTTAATGGGTCGTTTCAAAGAGTCACTTCAGAAATGTGTAcgattgaaaaatgtttctaaacCGGCCCTAGAGTACCTATTTACACTTTTACAATTTGGTTTAAATAATCCTAAAAGTGATGTAGAAATCTTTCCTATGGCCGAAAGCTTGGAGACTAACTTGGAAGTGTTGCTGTTGGCTGATAGATTTCTATTTGAAAAACTTAAAGAATTATTGAGTAGTGCTATCTTACAATTTCAACTATCACCAGAAACGGCGGATAGGATTTATATATGGTCACTGAGTGAGGGCATGGGATTTTTATGTGTTGAAGCAGTGGCATATTTGCTTACAGGGAAAATGTGTGAATTGCAGCGCACAGAATGTTTCAGAAATATTCTTAGCTTAAAATATAAAGACCAATGGCTTGACGATATAAAATCGATGATTATGAGGCAACTTGTAAAATAG
Protein Sequence
MDKTYIKSTIEGLKSTASSRIQDSLLKIKNNVISNDRGLKLFRDCGGLDNLIPHLRKPNERILDITLSILGNCCLDEKSSLMVGKLNSFGPLVSILKTVCRDSILGRTCRLMGNLAQRYSNAEGLHNHGAVAALVALIESRDKTTSHATLTMAVRAIRQLWMVTDKRDEMLSLNAVRCIVILLIMQCESVGIMKSSNPEKELEELKRSQEELITGILKCLGYFTTYANPHCAEQIQGDGRGYQCLVALTKRYESVSLKCLINLCYVSSCRPLLGTAGLVECLVGILQKLSDVAWWPEGAAKALAQLSGESVNRSRLRHCGGLALLVAAARVNSYAMHALLQYVFDDSSFQILVNEGLISLLTDKLTNYLKTMDFEHNNLEKVDVVFETTKVMELREKTIDCTNSLKQNPTEQPNDSCHIEGKGLLLRRKGQLASKNGDELKVVIERDNMIVGFVDAIDSDATDDSQSEDENQTRRKCLKRARSGSPKFLKNKSQLIKMASRDWSAGVYWEPKSPEWPVNSQSQVAMSPDRTDRIPLSPYSDGNRSGFSPEYRGYSSSKRARWDWSPESNTSAGEGSSASPYWTEYQWSPSSSTSPTSPFSVNEDSSDSEISGRYSPVCSEADGETEDRAVNLTTSDKVLEFDATQVAHDLDELIMDDDESVDGEGTSEEDPNNIDVNTKSSSIACVLVLLFRVSHGACTYGSIREEAVPNHTLDLLTGRECLNALLDYVERCKRPLGRAARILARVLSNALCLMSILKHRLALRLHNMSISSKHPPTKCQQCKQIIRLSVKLLAQLTILAESSFGIGEISYQLLKGSSSMKQTLSLTLPYIVKTEKPLKKYFIDCSALNLLFNIISESREDMQDCVTALVKLANNVHIKDPKILENRFKDKIFVSYDPILDNLAVDEIVTFELDDLSMVKANKVFLCQNSDVFSAMLMGRFKESLQKCVRLKNVSKPALEYLFTLLQFGLNNPKSDVEIFPMAESLETNLEVLLLADRFLFEKLKELLSSAILQFQLSPETADRIYIWSLSEGMGFLCVEAVAYLLTGKMCELQRTECFRNILSLKYKDQWLDDIKSMIMRQLVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01159585; iTF_00923011; iTF_00856004; iTF_00197509; iTF_01115843; iTF_01495177; iTF_01495917; iTF_01494461; iTF_01176310; iTF_01156814; iTF_01155534; iTF_00195313; iTF_00204497; iTF_01337879; iTF_01130169; iTF_00180643; iTF_00249846;
90% Identity
iTF_01159585;
80% Identity
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