Basic Information

Insect: Parelbella ahira
Gene Symbol: -
Assembly: GCA_018244795.1
Location: DWME01000756.1:15394-28668[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0001 0.0073 17.3 1.5 1 23 431 453 431 453 0.96

2 20 0.00046 0.032 15.3 0.6 1 20 459 478 459 481 0.94

3 20 2.5e-05 0.0018 19.3 5.6 1 23 500 522 500 522 0.98

4 20 4.4e-05 0.0031 18.5 4.6 1 23 528 550 528 550 0.99

5 20 4.4e-05 0.0031 18.5 5.3 1 23 556 578 556 578 0.97

6 20 2e-05 0.0015 19.5 7.2 1 23 584 606 584 606 0.97

7 20 8.5e-07 6e-05 23.9 2.9 1 23 612 634 612 634 0.97

8 20 0.00012 0.0086 17.1 6.7 1 23 640 662 640 662 0.97

9 20 0.00012 0.0085 17.1 6.5 1 23 668 690 668 690 0.97

10 20 5.8e-07 4.1e-05 24.4 1.9 1 23 696 718 696 718 0.98

11 20 5.9e-05 0.0042 18.1 7.9 1 23 724 746 724 746 0.98

12 20 9.4e-06 0.00067 20.6 6.6 1 23 752 774 752 774 0.98

13 20 3.2e-05 0.0023 18.9 2.9 1 23 780 802 780 802 0.97

14 20 0.0056 0.4 11.9 7.5 1 23 808 830 808 830 0.95

15 20 2.7e-05 0.002 19.1 7.3 1 23 836 858 836 858 0.97

16 20 3.6e-06 0.00026 21.9 6.0 1 23 864 886 864 886 0.98

17 20 0.00016 0.011 16.7 10.0 1 23 892 914 892 914 0.97

18 20 5.3e-06 0.00038 21.4 2.3 1 23 920 942 920 942 0.96

19 20 0.00044 0.031 15.3 0.6 1 23 949 971 949 971 0.96

20 20 0.03 2.2 9.5 5.5 1 23 980 1002 980 1002 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0001	0.0073	17.3	1.5	1	23	431	453	431	453	0.96
2	20	0.00046	0.032	15.3	0.6	1	20	459	478	459	481	0.94
3	20	2.5e-05	0.0018	19.3	5.6	1	23	500	522	500	522	0.98
4	20	4.4e-05	0.0031	18.5	4.6	1	23	528	550	528	550	0.99
5	20	4.4e-05	0.0031	18.5	5.3	1	23	556	578	556	578	0.97
6	20	2e-05	0.0015	19.5	7.2	1	23	584	606	584	606	0.97
7	20	8.5e-07	6e-05	23.9	2.9	1	23	612	634	612	634	0.97
8	20	0.00012	0.0086	17.1	6.7	1	23	640	662	640	662	0.97
9	20	0.00012	0.0085	17.1	6.5	1	23	668	690	668	690	0.97
10	20	5.8e-07	4.1e-05	24.4	1.9	1	23	696	718	696	718	0.98
11	20	5.9e-05	0.0042	18.1	7.9	1	23	724	746	724	746	0.98
12	20	9.4e-06	0.00067	20.6	6.6	1	23	752	774	752	774	0.98
13	20	3.2e-05	0.0023	18.9	2.9	1	23	780	802	780	802	0.97
14	20	0.0056	0.4	11.9	7.5	1	23	808	830	808	830	0.95
15	20	2.7e-05	0.002	19.1	7.3	1	23	836	858	836	858	0.97
16	20	3.6e-06	0.00026	21.9	6.0	1	23	864	886	864	886	0.98
17	20	0.00016	0.011	16.7	10.0	1	23	892	914	892	914	0.97
18	20	5.3e-06	0.00038	21.4	2.3	1	23	920	942	920	942	0.96
19	20	0.00044	0.031	15.3	0.6	1	23	949	971	949	971	0.96
20	20	0.03	2.2	9.5	5.5	1	23	980	1002	980	1002	0.99

Sequence Information

Coding Sequence: ATGAATCAAGAACATCACAATATCAATACGGGTGGTGGCCAGCCGCCTGGCAATTCGGAGtcGCAGAACCAAAGAGTTCAATCTGCGCAGCAACAACAGCAGGGCAATAATCTACCTCCGACAACGTCAGCGACCGACTTAAGAGTAAACTCTGTTAACTCGGCAGCCGTGAACGTAGCTTTGTCGAGCGTTGCCAAGTATTGGGTGTTTACAAATCTGTTCCCTGGACCATTACCACAAGTATCAGTATACAATTTGCCTACAAATGCCAGAATAGAAAATGGAAAACCTGTACagGACCTTGGTCAGACTCACAGCATACTCAATGGTGATCCAAATATTATACTTGGACATCATGCAGGGCAACAACAGGTTACAGTATCTGCGGCAGGTCAGCAGATACCTGTCCCTCAAATTATTGCCACCCAATCTGGACAGACTCATGaAGCGCTTGTGACACATGGTCAGCAGCAGGAGCTCACAACGCAGCAGGCATCTAGTGGGACACAGGTGACAGTGAGCGCAAGCCAGAACTCTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGTAAATCATGTGGGACAtcaacagcaacaacaacagcaacacTTACTGCAACAACAACTCTTGGCAGCTACACGACAAGACCATGCAAATCAACagATCCAATTAACTGTTAGTGAAGATGGGATAGTCACTGTGGTAGAGCCGGGAGCAGGCAAACTTGTTGACAAGGAGGATCTACATGAGGCTATCAAAATGCCAACAGACCATACTCTCACTGTCCATCAGTTGCAACAAATCGTGGGCCATCATCAGGTGATTGATAGCGTAGTGCGAATAGAACAGGCGACCGGCGAACCGGCCAATATCTTAGTGACGCAGAACCCGGACGGCACCACCTCGATAGAGACGAGCGTGGCGGACCCGCTCTCTATCGTCAAGGACGAGAAGGCCGTTGGCAAAATTGAGGCAACTCAGTTCGCAATACCCACAGAGATCAAGGAAATAAAGGATTTGAAGAACGTCGGCGCCATGGGCATGGAAGGTGCAGTAGTCAAGATATCAGCGGGTGCGGCGGAAAACGATCTTCACGCGATGTATAAAGTGAACGTAGAAGATCTCTCACAACTGCTCGCCTACCACGAGGTGTTTGGCAAACTGAACACTGAAGGTCAACAGCAAACTAagGTAATAAGCGAAGTCGAGTCAGAAGCTGGAACAAGCGCGGCTATGTCGGAGGCGGACTCCTCGCCCGGCCATCACGCATGTGATATTTGCGGGAAGATATTTCAATTCCGCTATCAACTTATTGTTCATAGGCGATATCACGGAGAAAGTAAACCATACACGTGTCAAGTATGTGGCACAGCGTTTGCGAATCCCGTGGAATTATCGAGACATGGAAAATGTCACTTAGCGGGCGACCCTGCCGAAAGGCAAACGAAGAGGTTAACACAAGACAAACCGTACGCGTGCACCACCTGCCATAAAACATTCTCGCGGAAAGAACATCTCGACAACCACGTGCGAAGTCATACTGGAGAAACACCCTACAGATGTCAGTACTGTGCTAAGACGTTCACGCGCAAGGAGCACATGGTCAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACGGGTGAAACGCCGCATCATTGTCAAATATGCGGCAAGAAGTATACTAGGAGGGAGCATTTAGTGAACCATATGAGGTCACATACAAATGATACCCCGTTCCGCTGTGAACTGTGCGGCAAGTCCTTCACAAGAAAGGAACACTTCACCAATCACATATTGTGGCACACCGGTGAAACTCCCCACCGGTGTGATTTCTGCTCGAAAACGTTCACCCGCAAGGAGCACCTGTTGAACCACGTGCGGCAGCACACAGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCCAAGTCGTTCACCCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGTGGCTACTGCCCCAAGGCTTTCACAAGGAAAGACCATCTAGTAAATCATGTGCGCCAACACACGGGCGAGTCTCCGCACAAGTGCTCCTTCTGCACGAAGTCGTTCACCCGCAAGGAGCACCTCACCAACCACGTGCGGCAGCACACGGGCGAGTCTCCGCACCGCTGCACCTACTGCGCCAAGTCCTTCACCAGGAAAGAACACCTCACCAACCATATCAGACAGCACACGGGCGAAACGCCACACATGTGCACGTACTGCCCGCGCGCGTTCGCCCGCAAGGTGCACCTCACCGAGCACGTGCGCCAGCACACGGGCCACGCGCCGCACGCCTGCTCCTACTGCAACAAGAGCTTCACGCGCAAGGAGCACCTCGTCTGCCACGTGCGGCAACACACGGGCGAAACTCCGTTCAAGTGTACGTACTGTACGAAGTCGTTCTCGCGCAAGGAGCACCTTACGAACCACGTGCATTTGCACACTGGCGAGACGCCGCACAAGTGTCCCTTCTGCACCAAGACATTCTCGCGCAAGGAACATCTTACCAATCATGTCAGGATACACACAGGTGACTCTCCTCATCGATGTGAATTCTGCCACAAGACGTTCACACGCAAGGAGCACTTAACAAACCACTTGAAACAACACACGGGTGACACGCCGCACGCTTGCAAAGTGTGCTTTAAACCGTTCACCAGGAAGGAGGGCCTCAATAACCACATGAGGTCGCACAGTTGCGGCGAAAGACCGTTCAGCTGCAGCGAGTGCGGTAAATCGTTTGCGTTAAAGGGTAATTTGCTCTTCCACGAGAGATCGCACAACAAGACGAGTAACTCCAAACCTTTCCGCTGCGAAGTCTGTTCAAAAGAATTTATGTGTAAAGGTCACCTGGTGACGCACAGGCGAACGCACACGGAGGCAGGCGACAGCGGCACAAGCACGGAGCCGGCAGCCGAAGGTGACGACTGCGGCGACTGCAATAAGTGTGAAAAGGATCCACCTGACCTGGTTGAGCGGAAACACGACACTAGgGCTTCATCATCAGAAAGTAGACCTGCAGAAACCAACATAGCACAAACCCAGCAAACCAATACAGCTGTGATGCAGATCACAAGTCAACAAGTCCGTACGGCAACACCGAGCAACGCCACCAGCGTAGCGACCGGCACCTTCACGCACACGGCCAGCTCGCAGCACCACGCCGGCACCGCGATAGCGCACCACACCGTCACTGTCAACTACTAG
Protein Sequence: MNQEHHNINTGGGQPPGNSESQNQRVQSAQQQQQGNNLPPTTSATDLRVNSVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYNLPTNARIENGKPVQDLGQTHSILNGDPNIILGHHAGQQQVTVSAAGQQIPVPQIIATQSGQTHEALVTHGQQQELTTQQASSGTQVTVSASQNSHQQVPNNRVEFVQHHNIDMVNHVGHQQQQQQQHLLQQQLLAATRQDHANQQIQLTVSEDGIVTVVEPGAGKLVDKEDLHEAIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSVADPLSIVKDEKAVGKIEATQFAIPTEIKEIKDLKNVGAMGMEGAVVKISAGAAENDLHAMYKVNVEDLSQLLAYHEVFGKLNTEGQQQTKVISEVESEAGTSAAMSEADSSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGTAFANPVELSRHGKCHLAGDPAERQTKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRREHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHMCTYCPRAFARKVHLTEHVRQHTGHAPHACSYCNKSFTRKEHLVCHVRQHTGETPFKCTYCTKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGDSPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHACKVCFKPFTRKEGLNNHMRSHSCGERPFSCSECGKSFALKGNLLFHERSHNKTSNSKPFRCEVCSKEFMCKGHLVTHRRTHTEAGDSGTSTEPAAEGDDCGDCNKCEKDPPDLVERKHDTRASSSESRPAETNIAQTQQTNTAVMQITSQQVRTATPSNATSVATGTFTHTASSQHHAGTAIAHHTVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00795879;
90% Identity: iTF_00970589;
80% Identity: -