Pahi000325.1
Basic Information
- Insect
- Parelbella ahira
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_018244795.1
- Location
- DWME01000123.1:19318-20824[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-09 4.2e-05 23.6 5.0 222 298 15 83 10 85 0.75 2 2 2 2.8e+04 -7.5 17.8 3 44 98 139 81 159 0.46
Sequence Information
- Coding Sequence
- ATGTTGAAGAATCCCAGCAGGTCcataaagatagagatatttaacgtTCGGTTGCAGAAGCTAGTGAGCTCGAAGCAGGAGCTGGAGTCGGAGGTGCGCAAGCTGAAGCTGTGCCTGAACGaggagcgcgcggcgcggcaCAACGGCGTGGCCGCGCACCACGAGCGCGAGCGCGACGACGAGCTGGAGGCGGCGCGCAAGGCGCTGGCCGAGGCGAAgggccgcgccgcgcgcgccgagGCGGAGGCGGCGCTGCaggccgcggccgccgcgcgcctcgacgccgcgctcgcccgcctgcgcgcgcgccgcgacCGCCAGGACGAGCACGAGGAGCAGCTCAAGCAGGAGCGCCGCCGCCTGCAGCGCGAGGCAAGAGAGGCCCTCAACCGAGTGGAGGAACTGGAGACGGAGAACAGCCACCTCACCAAGCGGCTGGACAAACTCAAGAACGCCAAGTCTGCGCTGCTCAAGGACCTGTGA
- Protein Sequence
- MLKNPSRSIKIEIFNVRLQKLVSSKQELESEVRKLKLCLNEERAARHNGVAAHHERERDDELEAARKALAEAKGRAARAEAEAALQAAAAARLDAALARLRARRDRQDEHEEQLKQERRRLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -