Basic Information

Gene Symbol
ab
Assembly
GCA_963082885.1
Location
OY720171.1:21366982-21376679[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-29 1.9e-26 93.4 0.0 1 100 28 123 28 126 0.95

Sequence Information

Coding Sequence
ATGTTAGGCGGCGCCGCGGCCGGCGGCGAACAACAATACTCCTTGCGGTGGAATGATTTCCACTCGTCCATGGTGTCGTCGTTCCGGCGGTTGCGCGACGAGGAGGACTTCGTCGACGTCACGCTGGCGTGCGCAGGCGCCACCTTCACCGCTCACAAGGTGGTGCTATCGGCGTGTAGTCCATATTTCCGGAGGCTTCTGAAAGCGAACCCATGCCAACACCCCATCGTAATTCTTCGAGATGTACATGATAAAGACATGGAGAGTCTACTAAGGTTTATGTACCAAGGAGAAGTCCATATCGGACAAGAGCAACTGAAAGAGTTCCTGAGAGCAGCGCAGCTACTGCAAGTACGAGGCTTAACAGATGTGCCAGCGCCGGCGCCAATGGCTACCATCGATCAGAAGGCGTCACCATCAGCATCATCGTGGACGGAGACTGGAAGCGGGGGATCTCGCGAGGGTAGGGAGAGTCAACAACGCGAAGGTAGAAGGCCTAGGAAGCCAGATGACAACGCAGCCAATACCCCACCACCGAAACGTGCCAGATCTTCTGATCTGTATCAAGCGCAGATGAAGTCCAGGACGGAACAACTGCTGGCGCAGGGAGCCAGCCCAGAGCGCTTGGGCACTAACGGGCATGAGCTCGCGCTGTTCAGCCAATCCATGGATACCTCGCAAAATCCACACCTTTCAGGAGTCTCCAACAATTTGTCTGGTGACGGAGAAGAGTCATCGTCGGACGCCGGCGCGAGCGACACGGAGGGCGAGACCCGCGCTAAGCAGGAGCCGCTGGACTACGACGATCCTGCCACCATGGCAAACACTAACGGAGCCTTGCCGCACAACTTTCCGGGATTGTTGAATCTACCAGGTTTTCCCGGACTGCCAGGTCCATCAGGCATACCAGATAATTACGGAGGTTGTCGACGAACGCAAGATTTGCTGCGCGTGAGGGCTACAGATCCGAGGCCATGTCCTAAGTGCGGCAAGATCTATCGCTCTGCACACACGCTTAGAACGCACCTTGAGGACAAGCACACCGTATGCCCTGGATACCGTTGCGTCTTATGCGGCACGGTAGCAAAATCACGTAACTCCCTACACTCGCACATGTCACGGCAACACCGTGGAATCTCTACCAAGGACCTACCCGTGCTGCAAATGCCAACTAGATTCGATCCAGAACTTGCCAGCCAGTTGCTAGCCAAAGCCGGAGTGAAAGTATCTCCCGAACAACTACGAGCTCGCGCGTCACCCACCGGCCCTCGTAGATCGGACATCAAGCTAGATGCCAAGTCTGCTGCTTCAGAAAGCAGTTCTATCTGCGGGGACAATGACAACGACGACCTGAGCCAATCGAGATATCAAGATAACATACCGGTTTCACCACCtcACATCAATAACTTGGCCAATACGACCATAACCAAAGTGCCGGCGGTGCGAGCGGTAACCGCCAAGACTGTGGAGAACATCCCTCACGGACTGGCCGCGGGAATGAAACACGATGACTACCCTCCTGGCTACGGCGGCAGCTCGGCTTTGTTGGATACCTACCTGCAGTACATCGGCGAGAATATGTTTGGTATGAACGCAAAACTGGCACAAATGAACGCGATGCACATTGACCGAAAGACTTACGAAGAACCGTCACCACAAATGGGATCTTTGCCGCCGCCACCGACGAATCTAGCCCACCAGCGTTTCCTCAAACAAATGCAGCGGCAGTACACGGAGAGTATGGCCAAGCCTGATATTATGAGGGATTCTGATGAGCCTCTAGACCTCGGTAAGGAAAGACAGAGAAATGATAGTATAAGCGAGACTGATGACAAGCACGAAAGCTCCGATAAAGACAACGGGAAAGATTATTACAAAGACTATAACGTCGAGGATAGAAGAGTAAACAACTCTGAGCAGGATCCCGACAACAATGGTCAGGACGACGGCGACTACTCGGAAGACGAACACAACAAGAACTCTTCATGA
Protein Sequence
MLGGAAAGGEQQYSLRWNDFHSSMVSSFRRLRDEEDFVDVTLACAGATFTAHKVVLSACSPYFRRLLKANPCQHPIVILRDVHDKDMESLLRFMYQGEVHIGQEQLKEFLRAAQLLQVRGLTDVPAPAPMATIDQKASPSASSWTETGSGGSREGRESQQREGRRPRKPDDNAANTPPPKRARSSDLYQAQMKSRTEQLLAQGASPERLGTNGHELALFSQSMDTSQNPHLSGVSNNLSGDGEESSSDAGASDTEGETRAKQEPLDYDDPATMANTNGALPHNFPGLLNLPGFPGLPGPSGIPDNYGGCRRTQDLLRVRATDPRPCPKCGKIYRSAHTLRTHLEDKHTVCPGYRCVLCGTVAKSRNSLHSHMSRQHRGISTKDLPVLQMPTRFDPELASQLLAKAGVKVSPEQLRARASPTGPRRSDIKLDAKSAASESSSICGDNDNDDLSQSRYQDNIPVSPPHINNLANTTITKVPAVRAVTAKTVENIPHGLAAGMKHDDYPPGYGGSSALLDTYLQYIGENMFGMNAKLAQMNAMHIDRKTYEEPSPQMGSLPPPPTNLAHQRFLKQMQRQYTESMAKPDIMRDSDEPLDLGKERQRNDSISETDDKHESSDKDNGKDYYKDYNVEDRRVNNSEQDPDNNGQDDGDYSEDEHNKNSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01230755; iTF_00932773; iTF_00382790; iTF_01171978; iTF_00663201; iTF_01171112; iTF_00663692; iTF_00811151; iTF_01170703; iTF_01171573; iTF_00811613; iTF_00696965; iTF_00698821; iTF_00696571; iTF_00698428; iTF_00318195; iTF_00318564; iTF_00322072; iTF_00321702; iTF_00706139; iTF_00706586; iTF_01336458; iTF_01529316; iTF_00662343; iTF_01528839; iTF_00120136; iTF_01336043; iTF_01528427; iTF_00662739; iTF_01529715; iTF_00267769; iTF_00267322; iTF_00119710; iTF_00633284; iTF_00737990; iTF_00686856; iTF_00686474; iTF_00632883; iTF_00737597; iTF_01219880; iTF_00638757; iTF_00639174; iTF_01220299; iTF_01429164; iTF_01429584; iTF_00635917; iTF_00635531; iTF_01161485; iTF_00701187; iTF_00697477; iTF_00700229; iTF_00700647; iTF_00704592; iTF_00701617; iTF_00704119; iTF_00697912; iTF_00705144; iTF_00705632; iTF_00034359; iTF_00033932; iTF_00361751; iTF_00362190; iTF_00790839; iTF_00790417; iTF_00250586; iTF_00377659; iTF_00377218; iTF_00856763; iTF_00910172; iTF_00909812; iTF_00703582; iTF_00703058; iTF_00913727; iTF_00914136; iTF_00123819; iTF_01094498; iTF_00071620; iTF_00071909; iTF_01095077; iTF_00924902; iTF_01093254; iTF_00121993; iTF_00121581; iTF_00123502; iTF_01339056; iTF_00745918; iTF_01094175; iTF_01527460; iTF_01526195; iTF_00037944; iTF_00036954; iTF_00038970; iTF_00038331; iTF_00446350; iTF_00449298; iTF_00375441; iTF_00726582; iTF_00726966; iTF_00374336; iTF_00831360; iTF_00622963; iTF_00623658; iTF_00237885; iTF_01041931; iTF_01042369; iTF_01208395; iTF_01361227; iTF_01075628; iTF_01264812; iTF_01076659; iTF_00120653; iTF_00121034; iTF_00447379; iTF_00445333; iTF_00445749; iTF_00823149; iTF_01360813; iTF_00043694; iTF_00041921; iTF_00908387; iTF_00043083; iTF_00908044; iTF_00041021; iTF_00042782; iTF_01361772; iTF_01363235; iTF_01362161; iTF_01363582; iTF_00772141; iTF_01029391; iTF_01031604; iTF_01193269; iTF_01192842; iTF_00177303; iTF_00951959; iTF_00383881; iTF_00384217; iTF_00952352; iTF_01026455; iTF_00907161; iTF_00907472; iTF_00827119; iTF_01209423; iTF_00114577; iTF_00112610; iTF_00112995; iTF_01316494; iTF_00114201; iTF_00236291; iTF_00236741; iTF_00235963; iTF_00237116; iTF_00859108; iTF_00858692; iTF_01490255; iTF_01490638; iTF_00820211; iTF_00820585; iTF_00064118; iTF_00063717; iTF_00441650; iTF_00345939; iTF_00433269; iTF_00432787; iTF_00433695; iTF_00017462; iTF_00762209; iTF_00017826; iTF_00685922; iTF_00018662; iTF_01437609; iTF_00761804; iTF_00018286; iTF_00685583; iTF_01487824; iTF_01437201; iTF_00908984; iTF_01488184; iTF_00909403; iTF_00171965; iTF_00794789; iTF_01441222; iTF_00784840; iTF_00784519; iTF_01532234; iTF_01533194; iTF_01065196; iTF_01064787; iTF_00712052; iTF_01535051; iTF_01502607; iTF_01502215; iTF_01031250; iTF_00677780; iTF_00870201; iTF_00869784; iTF_00622462; iTF_00622100; iTF_00931583; iTF_00852320; iTF_00851944; iTF_00448663; iTF_00448259; iTF_01172503; iTF_01172907; iTF_00968153; iTF_00968454; iTF_00187322; iTF_00187698; iTF_00347578; iTF_00347854; iTF_00889371; iTF_00281501; iTF_00823997; iTF_00824348; iTF_00279230; iTF_00279623; iTF_00724351; iTF_00724052; iTF_01569471; iTF_01569894; iTF_00390528; iTF_00709824; iTF_00709377;
90% Identity
iTF_00794789;
80% Identity
-