Pful002669.1
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- -
- Assembly
- GCA_963082885.1
- Location
- OY720171.1:21827182-21829021[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-09 1.5e-06 28.8 0.0 11 42 25 56 15 59 0.84
Sequence Information
- Coding Sequence
- ATGCCAAGAAATCGTAAAAGGACCACCGCTAAAGCGGCTTGGACCGAACAAGATCTTAAATGCGCTAAAACTGCGATTGAAGAAGGTATGTCTAAAAGAAAAGCCGCAAAACAATTTAACATACCATTTACTACGTTAAgggatagaataaaaaatgaaaacatgAGCAACCCAAGGCTAGGTCGCAAGCCTGTATTCACTCCACAGCAAGAAAATGAAATTGCTGAACAAGTTAAATTGCTGGGTTCGCTATACTACGGAATCAATGTCACAGATTTGCGCAAACTTGTTTATAAATATGCTGAACTCAACAATATCCAAAACAATTTTGATCAAAGTAGCAAAACAACTGGATTGGATTGGGTACACGCCTTTATGAAACGCAATCCTTCAGTTTCTATACGTAAAGCTTTTAAAGCTTTCAACAAAGCAGAAATAACACATTTCTATGATAAACTTGGCGGTTTAATGGAAAAACATAAGTTTATTCCCAGCAATATTTTCAATGCTGATGAAACTGGTATCAAGACGGTGACAGACCCAGGAAAAGTGCTCGCTGAAAAAGGACAAAGAAGAGTCGGATCTGTTACAAGTGGCGAACGAAGAAGCAATATAACAGTTATGTGTGCAATGAGTGCAGCTGGAAACTTCATACCGCCCATGTTTATTTTTGCTAGGCAGAGAATGACGCCTTTATTAGAAAAAGATGGACCAGCTGGTGCATTATATACTAATTCTAAGAATGGCTGGATTGTTACTTGGCTCAAACATTTCAGAGCATTTGCTAAGCCTACCCAAGAATCACCTGTATTATTGATTCTGGACAATCACAGCAGTCACATTTCGCTTCCTGCTTTTAACTTTTGCAAGGAAAACTACATTACAATGCTTTCCATTCCACCACACAGTTCACATAGAACACAGCCACTGGATGTGTCTTTTTATGGACCACTGAAAGCTGCTTATCGGCATAAATGCAACAGGCACATGAAGACACATTTAATGTCTAAAATAACTCCATACGATGTTGCAGGTCTTTTCAATAAAGCATATGTACAAGTTGCGAATATAAGTAAAGCAGAATCTGGATTTCGAGCCACAGGCATTTATCCATTAAGCCCAAATGTTTTCACGGATCAAGATTTTCTAGCAGCTTCGCTGATGGCACAAGAATCAGAACAAATCGCTGAAAACCGAGACCCAAATGTCCAGAATTTAGAAAATGCGCAATCTGATCATATGGCTACAATCCCAAGACAGACATCTCCTTTGGCAGGTCCATCAAATACGGATCAATGGTCTGAATCTGTTTTGGCAGTTGCTTCTAACCAAGAACTTGTTGATGAGCAAAGACGTCCGGTGTCTTTTGCTACTATAGCAACGACACCAACTGTTGCTTCATCTTTTAAACCTGGCCAAAGAAAGCGGAAACAACATGCTACCATATTAACTGCAACGcctatgaaaattattttagaggataaagaaaagaaaagaatagCGAAACTTAATAAGACTGGAAAAGGTGATAAATCAAAACTAAATCAAGCTGTCAAAGAAAAGAAGAACAAAGTTTTGAAACATAAATCTTACAAGAGAAAAATTTTACAAGAAAGTTCTTCAGAAAGTGAAGATGAAGAGCAACTTTGCGATGACAATAGTGATGACGAAATGAGTGTGGATAATGAACATTATAACAACTGGTGGGATTCAGCAGATGGATACATCTGTGATTTATGCCtccgaaaataa
- Protein Sequence
- MPRNRKRTTAKAAWTEQDLKCAKTAIEEGMSKRKAAKQFNIPFTTLRDRIKNENMSNPRLGRKPVFTPQQENEIAEQVKLLGSLYYGINVTDLRKLVYKYAELNNIQNNFDQSSKTTGLDWVHAFMKRNPSVSIRKAFKAFNKAEITHFYDKLGGLMEKHKFIPSNIFNADETGIKTVTDPGKVLAEKGQRRVGSVTSGERRSNITVMCAMSAAGNFIPPMFIFARQRMTPLLEKDGPAGALYTNSKNGWIVTWLKHFRAFAKPTQESPVLLILDNHSSHISLPAFNFCKENYITMLSIPPHSSHRTQPLDVSFYGPLKAAYRHKCNRHMKTHLMSKITPYDVAGLFNKAYVQVANISKAESGFRATGIYPLSPNVFTDQDFLAASLMAQESEQIAENRDPNVQNLENAQSDHMATIPRQTSPLAGPSNTDQWSESVLAVASNQELVDEQRRPVSFATIATTPTVASSFKPGQRKRKQHATILTATPMKIILEDKEKKRIAKLNKTGKGDKSKLNQAVKEKKNKVLKHKSYKRKILQESSSESEDEEQLCDDNSDDEMSVDNEHYNNWWDSADGYICDLCLRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158766;
- 90% Identity
- iTF_01152059; iTF_01152058;
- 80% Identity
- -