Pful025487.1
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- -
- Assembly
- GCA_963082885.1
- Location
- OY720190.1:12651059-12653530[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.8e-09 3e-06 27.9 0.0 2 38 16 52 15 59 0.87 2 2 4.7 1.4e+03 0.1 0.0 25 40 729 744 722 745 0.87
Sequence Information
- Coding Sequence
- ATGGTGagtaattataaaagaaaaactaacaaaGCGTCGTATTCAAGAGAAACGCTACAAGAAGCAGTAAAAGCTGTAAAAAATGGAGATTTAAGTGGCTATAAAGCTGCTCAAATGTATAAGATACCAAGGATGACGATCATGGATCATGTTAACAATAAGagaattaaatcaaaatcactAGGAAGAAACACAGCATTGTCTGTAGAAGTAGAAAAGAAATTAGCATTCTACCTTCACATAATGGAAAAGAATGGCTTTGGATTAAGCAAAACAGAAGTCTTAGAAATGGTTTCACAATATGTTCAGCAAAACAAATTATCAACGCCATTTACAAATGGTATACCAGGTAATGCATGGTTCACTGCATTCAAAACAAGAAACAATTTGTCTATTAAAAAACCTCAAGCGGTTGAATTCGCGAGAAAGAAGGCTGTGAATCCTTTTATTGTTTATCCGTATTTTGATTTACTAAATAACACATTAACTGATTTAAATTTGTGCGACAAACCTTGTCAAATTTGGAACCTTGATGAGACAAGTTTCTCAAAAGACCCACAGAAAACTAAAATCGTTGGGCTTAAAGGGCACGCGGCTACTAGGGTGATTGCCTCACCAGGAAAAGATAACACGACGGTTTTACTTGGAGCCAATGCGGCTGGAGAAAAATTGGCTCCACTGGTGATTTTTAAAGGTAAACATATGTGGGATGAGTGGACGTCCCCAAAAGCTTATCCGGGAACAACCTATGCTGCCACTACCAATGGATGGATGGAGACCGCCATTTTTGAAAGGTTtttcaaaaaaacatttttgccaGCTGTCGGAGATACACGCCCTGTTATACTTATTTATGATGGCCATGCAACTCACGTAggtttaaatataattgaagaAGCGCGTAAAAACGACATAACTATATTAAAGTTGCCAGCACACACCAGTCACGTTTTACAGCCCCTAGATATTGCCGTAATGAAATCGTTCAAAGATCGATGGGATCCATTACTGGTAAAATGGCAACGTTTGAATGTTGGTATCACATTACCAAAGAAAGAGTTTGCTAGGCTTATCGGAGAGGTTTGGTCGCAAATTCATAGCCAAGTGTTAAGAAATGGTTTCCGCAAGGCCGGAATTTTTCCTTTCAACCCTAATTCGATTGAAGAAAAACACTTCGACACGTTGAAGCTAGAACAATGGAAAAATCTTCAAGACCTTGAAATACAAAATGTGCGGAGCCCTCGTGTAGGATGTTCTAATTGTGATGCCAAAACGGAGAGTAGAACTATCAAAAATAATCCAAAAACTCTGCTCACATTAGCACTTAATTGCATTACGGAAATAGCTCGTACACCTTCATCTTGTGTATCACACATGCCTGTGACCTCAAGTAAATCGATCCAAGTGTTAGAAGACAGAATTGTAACTTTTGAAGAACTTCTCTTGATGAAGGTTAAAGCTGGAAACAATGTAAAAACTAAACGTCAAAGAGTAGCACCAGGAGCCGAAGTTATAACGCACCAAGATGTTGTTCTCAGAAAAATGgatgaaaaattaaaacgtattaaaaaaGAACCAACAAAGCCCCGAAAAAGTAACCCATCAGCGCTGCATAAAAAAACCaccaatttaaatgtaaaaggAACACTCGATTCTACCCGTGACAACGATGCCATTATTACTTCAAGCTGTTCCGAAAATACCAACAAGTCTAAGACATCAGATGCTGTTCTTTCATTACCTGGTCCATCTGGTTTAGCGAAGAATTCTTTTATTAGAGAGCACCAAACGCGAAAAACAGTAACTGTAACAAGAAAAGGTAAAGGCATTGGGAAAAGTAGTATCAAGATCAAAGAAGAAAGTCAGAAAACGCCAAAACAACGCCAAAAGCGAGCTTATGTATCCTCATCGACCTCGACAAGTGTTTCGGATTGTATGACTATTCACAGCGACTCAGATATTATCGACTTTGACCAAGATCTGAATGAAAGTTTTTCAGAAACTCCAAAAGAGAAAACAATGTCCCAAAAAGAGAAAAGCAGATCATATACAGTAAATAAAAAGACAGAGGGAGTTGGTTACCGAATAATTAGAAAAAGTGAAGAAAACAAGTTTGATTCAGATAGTAGCTATGAAAATAGATGCGATTTAATGAACGTTAATGTGGAGAAAGCCCAAATAGATAATTATAGCATTAATGATGAAGTGTTAGTGCGATATTATGAGCGAAATAAATGGACATACTATGCTGGCTATGTAGAAGAGGTAAAACCTGGCGATGATGACGTGTATTACAAGATAAGATATTACAAAACTGTTAAAAAACCACTGAAGtttattgtaacaaaaaaaattgatcGTGATGTTGTGCCCagcataaacataataaaaaaaatacgcttGAATTCTGATCCAAACTATTCCAAAGAATTTAAATTGTCTAATGATGAAGacaagatttattttttgtaa
- Protein Sequence
- MVSNYKRKTNKASYSRETLQEAVKAVKNGDLSGYKAAQMYKIPRMTIMDHVNNKRIKSKSLGRNTALSVEVEKKLAFYLHIMEKNGFGLSKTEVLEMVSQYVQQNKLSTPFTNGIPGNAWFTAFKTRNNLSIKKPQAVEFARKKAVNPFIVYPYFDLLNNTLTDLNLCDKPCQIWNLDETSFSKDPQKTKIVGLKGHAATRVIASPGKDNTTVLLGANAAGEKLAPLVIFKGKHMWDEWTSPKAYPGTTYAATTNGWMETAIFERFFKKTFLPAVGDTRPVILIYDGHATHVGLNIIEEARKNDITILKLPAHTSHVLQPLDIAVMKSFKDRWDPLLVKWQRLNVGITLPKKEFARLIGEVWSQIHSQVLRNGFRKAGIFPFNPNSIEEKHFDTLKLEQWKNLQDLEIQNVRSPRVGCSNCDAKTESRTIKNNPKTLLTLALNCITEIARTPSSCVSHMPVTSSKSIQVLEDRIVTFEELLLMKVKAGNNVKTKRQRVAPGAEVITHQDVVLRKMDEKLKRIKKEPTKPRKSNPSALHKKTTNLNVKGTLDSTRDNDAIITSSCSENTNKSKTSDAVLSLPGPSGLAKNSFIREHQTRKTVTVTRKGKGIGKSSIKIKEESQKTPKQRQKRAYVSSSTSTSVSDCMTIHSDSDIIDFDQDLNESFSETPKEKTMSQKEKSRSYTVNKKTEGVGYRIIRKSEENKFDSDSSYENRCDLMNVNVEKAQIDNYSINDEVLVRYYERNKWTYYAGYVEEVKPGDDDVYYKIRYYKTVKKPLKFIVTKKIDRDVVPSINIIKKIRLNSDPNYSKEFKLSNDEDKIYFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00404706;
- 90% Identity
- iTF_00404706; iTF_00404707; iTF_00404708; iTF_00404709; iTF_00404710; iTF_00404711; iTF_00404712; iTF_00404713; iTF_00404777; iTF_00404714; iTF_00404715; iTF_00404716; iTF_00404717;
- 80% Identity
- -