Pful016044.2
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- -
- Assembly
- GCA_963082885.1
- Location
- OY720184.1:570063-573026[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-09 4.1e-07 30.6 0.0 2 36 18 52 17 59 0.88
Sequence Information
- Coding Sequence
- ATGGGACGGTATCGAAAGAAAATTGGGTCACGGCCATACCGTAACTACTCCAATGAAGCGGTTGAAAACGCAGTGGCTTCGGTGCGGAAAGGTATGTCGATCAGAAAAGCTGCAGAAAAATATAGTGTTCCACCAGCAACTGTACAGAGAAAAGTATGTTGTAAGCATATGAAGAAAGTTGGAAGACCCACAGTTTTTTCAATTGAAgatgaaaatataattgttgAAGCCTTAATTCTTTGCGGGAAATGGGGATTTCCTATAACAGCTTTTGACTTAACGCTTATTGTGAAGCACTACCTTGACACAAAGGGAAAGACTGAACCTAGATTTAAGAATAATTTGCCAGGCAGATTCTGGCTGAAAGGATTTTTAGACCGAAACAAACATGAAATTTCATACAAGTTTTGTGAAAACATTAAAAGAGCAAGAGCTGCAGTTAATCCTGAAATGATATCAGATTATTTTGATAATCTGATGATTAGCTTGGAGGGAGTAAGACCAGAAGCAATTGTGAATTTTGATGAAACTAACTTTACCGACGATCCTGGGAAAACAAAAGTATTAGTAAGAAGAGGTTTCAAAAGTCCAAAAAATATCATTGATGCTTCCAAGTCTAGCACATCGGTTATGTTTGCAGGATCAGCATCAGGAGTTTTATTACCAATTTACGTGGTATATAAAGCTGAGCACCTTTACGATTCTTGGTTAACAGGAGGGCCAGCTAATACATTATATAATCGAACAAGAAGCGGTTGGTTTGACAGCACAACGTTTGAGGACTGGTTTTTCAAAGTAGTTGTACCATATTTCAATTCTGTAGGTGAAGGTCCGAAAGCAATACTGGGAGATAACCTGGCTAGTCATCTGTCTGTAAAGGTTATACAGAAATGTGCGGAATCGAATATTCGTTTCATATTTCTCCCTGCAAATAGTTCACACCTAACCCAACCGCTCGATGTCGCTTACTTCCGTCCACTAAAAGCGATATGGCGAAAAACTTTATTAGAATGGAAACAGAAAACCAGGGGCTGCATTCCTAAAGATCAGTTCCCGCGACTTTTAAAACGATCGTTAGATCAATTGTTGACATCTTCAGAGAATTTGAAGTCAGGTTTTCGTGCAGCTGGGATTTGCcctctaaacaaacaaacagttttGGCCAAGCTTCCCCTTGAAACTCCAAAAGATAACAGCGCTTCTAAAGAATGGGCGAGGGCATTCGaaagttttttaaaagaaagtcGTCTTAATACATCAGCTCCTCTTAAAGTGAAAAAGAAGAAATTGCAAGCTTCGGCAGGTCAAAGCCTTACAGTCTCCGATATTACAAATCCTTCAAATACTCAAAACATTGAAGAAGTTGACGTGGGAACTTGTGATTTAGAAGAAGATTATTTGGAAGTAAACATTGATTCAGACCCTTTAATTACGCAACCGAAAACAACACGTGAAGAAGATACAGATACTACAGTTTCTAGCAATTATTCTGTACATGatacatctgacagtgataatATATCCGAATTCCAAGATTTCGATAATTTAATAGAAGAAACCACAACACAATCAAATGTTATTCCtaacataaaactaaaacaacaaAGAAAACTTGTAAATTTAGATTCTGAAgatcaagaaaatatttttttccagcCAAGAGTGTCCAAATCGCGACAGAAATCAAAAGGTCAAGAAGACATAATTTCACGATCAAAAATATCCAAATCATCACAGAAACCGTCTTCTTCCACAAAAGATCAGGATAACGTAAGTACACAGCTAGAAGTGTTTGAATCACCACAGGAACTATTATCTTTCACTAATCAAGACGACATTATTTCGCTACCAAAATTATATGAACCAGCACAGCAACCATCTACCTCCAAATCCATTGATATAAAATGCAAACCTAAAGATCAAAATGATGTAATTTCACAGCCAAAACTGTTTAAATCAACACAGCAACCATCCTCCTCCAAAACtgataaaattaaactgaaaCAAGTTATAACTGAAAACAAGAACGACCTTGAAACCGAAGCAACTTCTGGAGTGTTATCTGTAAAATTATATGACTTTGTAAAAATTCACTTAATATACgatggttttaaaaataaaccaatgGTAAAAGAGTTCTTTGCTCAGATAActgaaattttaaatgaaaatgagtATTCCTATTCTATTCATGAGACTTTCATATGTTTTGTGTGGAGTATCAAGTATGGCACTTTATGA
- Protein Sequence
- MGRYRKKIGSRPYRNYSNEAVENAVASVRKGMSIRKAAEKYSVPPATVQRKVCCKHMKKVGRPTVFSIEDENIIVEALILCGKWGFPITAFDLTLIVKHYLDTKGKTEPRFKNNLPGRFWLKGFLDRNKHEISYKFCENIKRARAAVNPEMISDYFDNLMISLEGVRPEAIVNFDETNFTDDPGKTKVLVRRGFKSPKNIIDASKSSTSVMFAGSASGVLLPIYVVYKAEHLYDSWLTGGPANTLYNRTRSGWFDSTTFEDWFFKVVVPYFNSVGEGPKAILGDNLASHLSVKVIQKCAESNIRFIFLPANSSHLTQPLDVAYFRPLKAIWRKTLLEWKQKTRGCIPKDQFPRLLKRSLDQLLTSSENLKSGFRAAGICPLNKQTVLAKLPLETPKDNSASKEWARAFESFLKESRLNTSAPLKVKKKKLQASAGQSLTVSDITNPSNTQNIEEVDVGTCDLEEDYLEVNIDSDPLITQPKTTREEDTDTTVSSNYSVHDTSDSDNISEFQDFDNLIEETTTQSNVIPNIKLKQQRKLVNLDSEDQENIFFQPRVSKSRQKSKGQEDIISRSKISKSSQKPSSSTKDQDNVSTQLEVFESPQELLSFTNQDDIISLPKLYEPAQQPSTSKSIDIKCKPKDQNDVISQPKLFKSTQQPSSSKTDKIKLKQVITENKNDLETEATSGVLSVKLYDFVKIHLIYDGFKNKPMVKEFFAQITEILNENEYSYSIHETFICFVWSIKYGTL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00146337;
- 90% Identity
- iTF_01152047; iTF_00146330; iTF_00146337; iTF_00146338; iTF_00146339; iTF_01152045; iTF_00146334; iTF_00072703; iTF_00146335; iTF_00146336;
- 80% Identity
- iTF_00146337; iTF_00146338; iTF_00146339; iTF_01152045; iTF_00146334; iTF_00146335; iTF_00146336;