Pful010817.1
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- -
- Assembly
- GCA_963082885.1
- Location
- OY720178.1:17114050-17116431[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-13 6.2e-11 42.9 0.0 1 39 16 54 16 59 0.91
Sequence Information
- Coding Sequence
- ATGGTGcgaaattatgttaaaaaaaaggaaacggGCCCCAAATATTCCGAAGACAGATTAAACCGAGCTATTGAAGAAATACGGGCCGGTAGATTAACAATACATAAGGCGTCAACTTTGTACGGAATTCCTTTTTCAACACTATATTGTCGAATCAAAGGTACGCgaggaaatataaaaaaaacaaagggtAGGAGAACCGCACTCGCCGAAAATATAGAGAACGTGTTAGCAACTTCCATTAAAACCCTAGCAAAATGGGGCTTTGGCCTCAGCAGGAAAGAAATTCTGGAATTGGTGGGTCAGTTTGTTACTAAGAATGATGTTCAAACACCTTTCAAAAATGGGATTCCAGGGGAGGACTGGttccttaattttaaaaagcgaCATAATCTGTCCATTCGAAAACCAGAGCCGTTAGAATATGCTAGAAAGAAAGCTGCCACAGACCCATTTATTATTTACGGATATTTCAATCTTCTAAAAAAGCTTTTGGTTGAACTGGATATAGAGGACAAGCCTGGTCGTGTCTGGAATTTGGATGAAAGCAGCCTAAGTAGCGATCCATCCAAATCAAGAGTCGTCGGAGAAAAAGGTCAAAGCTCATCCCGAGTTACAAGCACCTCAGGTAAAGAAAATACTACCTTTGTTTTGGCTTGTAATGCTATGGGTCAACGAGTGCCTCCTTTGATAATATTCAAAGGAAAAAATATGTGGGATCAATGGAAAGCACCACCAGACAAAGAATTTCCCGGCACAGCTTACGCGGCAACACCCAATGGTTGGATGGAAACAGAAGTTTtcaaaaattactttaaaaaaaccctGGTACCGGCTTTGGGTGATGAAAGACCTGTCTTGGTTATATACGACGGCCACTCCACTCATGTTTCACTTGACTTGGTAGAATATGCTTTGGATCAAggaataacaattttaaaactccCTGCCCACACAAGTGATATTCTACAACCATTAGATGTATCCGTTTTCAAGTCTTACAAACAAAAATGGGACCAAACTGTTGCAACTTGGCAGCGACAACATATTGGTCAAAAGTTACCCAAATCCCTATTTTCTCAATTCCTGGGAGAAACTTGGACCAAAGTCAGCGACGACGTCATCAAGAATGGTTTTAGAAAGGCAGGCATTTTCCCGTTTGATGCTGATGTTGTTCCAAAGGAAAATTTTGCCAAAGAAGCTTTAGAGCGTTGGGAGAGACACCAACAACAAATTGAGAGGGGTGTGCAAGATAATACTATGGAGCTTGTGAATACCGAGCACATTGATAGTGCAAGGTGCGAATCGCCATCGCTTTTAACGTCGTTTTTTGAGAATGTTGATGAGGCGTCTAGTTTACAGTCACTGAATGTCAATTCTGTAGATCTACAAAGCTCCATTATTGAAACTCCACGTTCTCAAGAAAAGCCAGTTCATAATTCTGAATTCTCACAAGCCGCATCTATGGAGCAATTAATTCTGTCAGTTATTCACCAAAAACAAATGCCAAGCAAACAAAAGAGACGAAAGGTGGCCTCAGGTGCTGAAGTTATTACGTCTGCTGAAATTGTTAAAGTATTGAAGGACAAAGAACAAATTCAATCAGATAAACGAGTAAAAACTACAAAGAAATCgcaaataaaaaggaaaaaggcAAAGAAAACTGAGAATTCAGACAGTGACATAACGGACGTAGAATCTGTACAAGTTGGTAGTGacataaacaaagtaaaaaaaaaaatgaaaaggaaACAAAACACGAAATTAAACCGAAAGAAAAAGTCAGACGATACAGAGAGTGATGAAAGTTCTGAAGGCATAGTGTCTTATGCAGAATCAGATGCTAGTGAATGGATGGAAGAGGAAAACGAACGAGAAGAAGATGAACTATATCATTCTGATAAAGAAAATTACGAAAGCAGAAAAACACCtgtgataaaaagtaaaattggaACAGTTGAGatgaaaaaagtaaagaaaacaaaagaacAAGAAAAAGAAGAGATAAGAATTGAAAGAGAAGGATCACACGAAAAAGCAACTGAAGAGCAAGAAATAGAGAAGATAGAAACTGAGAGGACACGAACAGAAGAACAAACAGAAAAGAAAATTCAAGAAGTCCTTGTGAACAATTGGGTTATAGTGAAATATGCACTGAAAAAAGGACTTAAGTACTACGTGGGTGTGGTACAAAAAAAGGTGGGCCTTCGTTGGGAGGTGAAATTTGTAAGACGTAAGGGAAGTATATTTGCATGGCCAATAACGGACGATGTTGATCAAATTACGGCTGACTCCATCGTTCAGATACTACCTAATCCCGAAATAACCAAACGTGGTTTAATAACATTTGATTTTAAGttcaaaaatatgattatttccTAA
- Protein Sequence
- MVRNYVKKKETGPKYSEDRLNRAIEEIRAGRLTIHKASTLYGIPFSTLYCRIKGTRGNIKKTKGRRTALAENIENVLATSIKTLAKWGFGLSRKEILELVGQFVTKNDVQTPFKNGIPGEDWFLNFKKRHNLSIRKPEPLEYARKKAATDPFIIYGYFNLLKKLLVELDIEDKPGRVWNLDESSLSSDPSKSRVVGEKGQSSSRVTSTSGKENTTFVLACNAMGQRVPPLIIFKGKNMWDQWKAPPDKEFPGTAYAATPNGWMETEVFKNYFKKTLVPALGDERPVLVIYDGHSTHVSLDLVEYALDQGITILKLPAHTSDILQPLDVSVFKSYKQKWDQTVATWQRQHIGQKLPKSLFSQFLGETWTKVSDDVIKNGFRKAGIFPFDADVVPKENFAKEALERWERHQQQIERGVQDNTMELVNTEHIDSARCESPSLLTSFFENVDEASSLQSLNVNSVDLQSSIIETPRSQEKPVHNSEFSQAASMEQLILSVIHQKQMPSKQKRRKVASGAEVITSAEIVKVLKDKEQIQSDKRVKTTKKSQIKRKKAKKTENSDSDITDVESVQVGSDINKVKKKMKRKQNTKLNRKKKSDDTESDESSEGIVSYAESDASEWMEEENEREEDELYHSDKENYESRKTPVIKSKIGTVEMKKVKKTKEQEKEEIRIEREGSHEKATEEQEIEKIETERTRTEEQTEKKIQEVLVNNWVIVKYALKKGLKYYVGVVQKKVGLRWEVKFVRRKGSIFAWPITDDVDQITADSIVQILPNPEITKRGLITFDFKFKNMIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634257;
- 90% Identity
- iTF_01152005; iTF_01152006; iTF_00706870; iTF_00706871; iTF_00706872; iTF_01152001; iTF_01152002; iTF_01152003; iTF_00706867; iTF_00706868; iTF_00985917;
- 80% Identity
- -