Basic Information

Insect: Ectropis crepuscularia
Gene Symbol: -
Assembly: GCA_963693475.1
Location: OY856364.1:14266015-14269499[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.7e-13 4.3e-11 43.8 0.0 1 39 16 54 16 58 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.7e-13	4.3e-11	43.8	0.0	1	39	16	54	16	58	0.91

Sequence Information

Coding Sequence: ATGGTGCGAaattacgttaaaaaaaaagagacggGACCCAAATATTCCGAAGACAAATTAAACCGAGCTATTGAAGAAGTACGAGCCGGTAGATTAACAATACATAAGGCGTCAACATTGTACGGAATTCCATTTTCAACACTGTATTGTCGAATTAAAGGTACGCGAGGAgttatcaaaaaatcaaaagggAGGAGAAAAGCACTCACCGAAAATATAGAGAACGTGTTAGCAACTTCCGTAAAAACACTAGCAAAGTGGGGCTTTGGCCTCAGCAGGAAAGAAATTCTGGAATTGGTGGGTCACTTTGTTTCTAAGAATGATATTGAAACACCTTTCAAAGATGGGATTCCAGGGGAGGATtggtttcttaattttaaaaagcgGCATAATCTGTCCATTCGAAAACCAGAGCCGTTAGAATATGCTAGAAAGAAAGCTGCCACAGACCCATTTAATATTTACGGATATTTTAATCTTTTGAAAAAGGTCTTGGTTGAACTGGATATAGAGGACAAGCCTGATCGTATCTGGAATTTGGATGAAAGCAGCCTAAGTATCGATCCATCCAAATCCAAAGTCGTCGGAGAAAAAGGCAAAAGCTCATCCCGAGTTACAAGCACTTCGGGTAAAGAAAACACTACTTTTGTTTTGGCTTGTAATGCTATGGGTCAACGAGTGCCacctttaataatatttaaaggaaaAAATATGTGGGATCAATGGAAGGCGCCACTAGACAAAGAATTTCCCGGCACAGCTTACGCGGCAACACCCAATGGTTGGATGGAGACTGaagtcttcaaaaattacttcaaaaaaaccCTCGTACCGGCTTTGGGTGATGAAAGACCTGTCTTGGTTATATACGACGGACACTCCACTCATGTTTCGCTTGACTTGGTAGAATATGCTTTGGAACAAGgaataacaattttaaaactccCTGCCCACACTAGTGATATTTTACAACCATTAGACGTCTCGGTTTTCAAGTCTTACAAACAAAAATGGGACCAAACTGTTGCAACTTGGCAGCGACAACATATTGGCCAAAAACTACCCAAATGCCTATTTTCTCAATTTCTAGGAGAAACATGGACCAAAGTCAGCGAAGATGTCATCAAGAATGGTTTTAGGAAGGCAGGCATTTTTCcgtttgatgttgatgttgtccCAAAAGAGAATTTCGCTAAAGAAGCTTTAGAGCGTTGGGAGAAACACCAACAACAAATCGAAAGGGGTGTGCAAGACAATACTATGGAGCTTGTGAATACCGAGCATATTGATATTGCAAGGTGCGAATCGCCATCGCTTTTAACTTTGTCAATTTCCGAGAATGTTAATGAAGCCTCTAGTTTACAGTCACTGAATGTCGTCAACTCTCCACAAAGGTCCGATATTGAAATCCCATGTTCTCAAGAAAAGGCAGTTCATAATTCTGAAATCCAACAAACCGCATCTATGGAGCAATtaattttgtcagttattcaccAAAAACAaatgccaaacaaacaaacgcgaCGAAAAGTCGCCTCGGGTGCTGAAGTTATAACATCCGCTGAAATTGTTGAAGTATTAAGAAACAAAGAACAAATTCAATCAGCTAAACGCATAAGAACTACAAAGAAATCGAAAATAACAGGGAAAAAGGCAAAGAAGACTGAGAATTCAGACAGTGACATAACGGACGTAGAATCTGTACAGGTCGGTAGTGACATAAAcaaagctaaaaaaataaataaaaggaaaCAAAGAGCGAAATTAAACCGAAAGAAAAAGTCAGATGATACAGAGAGTGATGAAAGTTCTGAAGGTAAAGTGTATTATGCAGAATCAGATGCTAGTGAATGGATGGAAGAGGAAGACGAACAACGAGAAGAAGATGAACAATGTGATTTTGATAAAGAAAATAACGAAAGCAGAAAAACACCagtgatgaaaaataaaattggaagaGTAGGAACAGAAAAAGTAAAGGAAGTAGCAAAGGAAAAAGAAGAGATACGAATTGAAAGGGACGGATCACACGAAACAGCAGCCAAAGAGCAAGAAATAGAGCAGATAGAAACTGAGAAGACACAAACGAaggaaaaaacggaaaaaataattcaagaaaacaattGGGTTATAGTGAAATATGCACTGAAAAAAGGACTAAAGTACTATGTGGGTGTTATAAAAAGACAGGTGGGCCCTCGTTGGGAGGTGAAATTTGTAAGACAATTAGAAGAAAGGCAGCAGAGATTATCAGCACCACATTCCCTCATTGATAGTGGACTTGCATCTGACTTTTCTATGTTCAAGTTGTTTACATTGAGTTCTCTCCGGGCACTACAGCAGCAGGTTGAAGTACTGGCGCATCAACATGACAACTTGGAGATGCACACTAGGCGTAAGATACTACTGCTTCACGGTGTTCCAGAAACCAAAGGAGAGGATACTGCTGCCAAGATCACTGAACTTGTGAGAGAAACTCTATAA
Protein Sequence: MVRNYVKKKETGPKYSEDKLNRAIEEVRAGRLTIHKASTLYGIPFSTLYCRIKGTRGVIKKSKGRRKALTENIENVLATSVKTLAKWGFGLSRKEILELVGHFVSKNDIETPFKDGIPGEDWFLNFKKRHNLSIRKPEPLEYARKKAATDPFNIYGYFNLLKKVLVELDIEDKPDRIWNLDESSLSIDPSKSKVVGEKGKSSSRVTSTSGKENTTFVLACNAMGQRVPPLIIFKGKNMWDQWKAPLDKEFPGTAYAATPNGWMETEVFKNYFKKTLVPALGDERPVLVIYDGHSTHVSLDLVEYALEQGITILKLPAHTSDILQPLDVSVFKSYKQKWDQTVATWQRQHIGQKLPKCLFSQFLGETWTKVSEDVIKNGFRKAGIFPFDVDVVPKENFAKEALERWEKHQQQIERGVQDNTMELVNTEHIDIARCESPSLLTLSISENVNEASSLQSLNVVNSPQRSDIEIPCSQEKAVHNSEIQQTASMEQLILSVIHQKQMPNKQTRRKVASGAEVITSAEIVEVLRNKEQIQSAKRIRTTKKSKITGKKAKKTENSDSDITDVESVQVGSDINKAKKINKRKQRAKLNRKKKSDDTESDESSEGKVYYAESDASEWMEEEDEQREEDEQCDFDKENNESRKTPVMKNKIGRVGTEKVKEVAKEKEEIRIERDGSHETAAKEQEIEQIETEKTQTKEKTEKIIQENNWVIVKYALKKGLKYYVGVIKRQVGPRWEVKFVRQLEERQQRLSAPHSLIDSGLASDFSMFKLFTLSSLRALQQQVEVLAHQHDNLEMHTRRKILLLHGVPETKGEDTAAKITELVRETL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00634242; iTF_01334690; iTF_00634243; iTF_00634244; iTF_00634245; iTF_00634246; iTF_00634247; iTF_00634248; iTF_00634249; iTF_00634250; iTF_00634251; iTF_00634252; iTF_00634253; iTF_00634254; iTF_00825518; iTF_00634255; iTF_00825519; iTF_00634256; iTF_00825520; iTF_00737393; iTF_00825521; iTF_00737394; iTF_00825522; iTF_00737395; iTF_00825523; iTF_00737396; iTF_00825524; iTF_00737397; iTF_00825525; iTF_00737398; iTF_00825526; iTF_00825527; iTF_00825528; iTF_00825529; iTF_01152001; iTF_01152002; iTF_01152003; iTF_01152004; iTF_01152005; iTF_01152006; iTF_00706870; iTF_00706871; iTF_00706872; iTF_00288787; iTF_00700940; iTF_00288788; iTF_00288789; iTF_00706867; iTF_00706868; iTF_01334684; iTF_00985917; iTF_00810938; iTF_00810939; iTF_00810940; iTF_00810941;
90% Identity: iTF_00634242; iTF_00634243; iTF_00634244; iTF_00634245; iTF_00634246; iTF_00634247; iTF_00634248; iTF_00634249; iTF_00634250; iTF_00634251; iTF_00634252; iTF_00634253; iTF_00634254; iTF_00634255; iTF_00634256; iTF_00288787; iTF_00700940; iTF_00288788; iTF_00288789; iTF_00737398; iTF_01334690; iTF_00825518; iTF_00825519; iTF_00825520; iTF_00737393; iTF_00825521; iTF_00737394; iTF_00825522; iTF_00737395; iTF_00825523; iTF_00737396; iTF_00825524; iTF_00737397; iTF_00825525; iTF_00825526; iTF_00825527; iTF_00825528; iTF_00825529; iTF_01334684;
80% Identity: -