Pful013871.1
Basic Information
- Insect
- Parascotia fuliginaria
- Gene Symbol
- -
- Assembly
- GCA_963082885.1
- Location
- OY720182.1:742201-759758[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.6e-11 1.4e-08 35.3 0.0 4 39 122 158 119 162 0.89 2 4 1.3e-10 4e-08 33.9 0.3 2 39 174 211 173 215 0.92 3 4 1.5e-13 4.6e-11 43.3 0.1 2 45 229 273 228 273 0.96 4 4 8.3e-18 2.5e-15 56.9 0.0 1 42 280 322 280 324 0.95
Sequence Information
- Coding Sequence
- atgaatcctgggacaaagaggaaatcaGGTAGTGGGCTGGAGGAGCTGGCACCGCTGGCGCCGGCGGGCCCGGCCGCCACGCCGGTGTGTGtgaagcaggagcgcgcctcGCCGCCCGCTGTCACTCTGGAGACGCTGGAGTCAGCGCCGCATCATACCAAGAGCACATCACTGTTGAACCGGCACATGTCGCTAATGAACAGAGTGCCTGACTCCGCAGACTTCATGCCACTGTTGTCCGTAAAGGACGAACCCTCGTCCGAAGGTGAACATCATCTAAGCGGCGAGGATACAAATGACTCATCATGCGGCCGTCAAATATCGCCCGCACCTCGCAACAGTCCTAAGAGTTGGACGCAACAAGATATGGAACTGGCATTGGACGCTCTTAGGAAACATCAGATGAGTCTCACTAAGGCATCAGCTACATACGGCATTCCATCCACAACACTCTGGCAGCGCGCTCACAGATTGGGCATCGACACTCCGAAGAAGGAAGGATCCGCTAAATCTTGGAGCGAAGCTGATCTACGAGGGGCCCTACATGCTTTGAGAGCAGGAGCTATATCAGCTAATAAGGCTAGCAAAGCTTAtgGTATACCCAGCAGTACACTATACAAGATAGCTCGTCGCGAAGGTATCCGCCTGTCAGCGCCGTTCAACGCGGCGCCCACGGCGTGGCGGCGCGCCGACCTGCGGCTCGCGCTGGCCGACATACGCCGCGGGGCCAGCTCCGTGCAGCGCGCGGCCGCCACCTACGGGATACCGACGGGAACACTGTATGGTCGCTGTAAGCGTGAAGGTATCGAGCTGTCCCGGTCCAACCCCACGCCCTGGTCTGAGGATGCCATGGGAGAGGCACTTGAAGCTGTCAGAGTGGGCCAGATGTCGATAAACCAAGCCGCTATACATTACAACTTACCTTACTCCTCACTGTACGGAAGGTTCAAGAGGTGCAAGTACCAGATGCAGGGCATCCCTCTAAACCAGCAGCAGCCTCAAGATCTTCAAAAAACAGAAATAGACCCCCAACCACATGTACATCAATATTACCATCAAATGCCCCCCACACACGATCATGACCCCCTATACTCGATGTCAGAATACCCCTATAACACTCACATGCACGAACAATACGGTCAATATTACCAATCTTTTAACGGTATAGCGACCAGCTGA
- Protein Sequence
- MNPGTKRKSGSGLEELAPLAPAGPAATPVCVKQERASPPAVTLETLESAPHHTKSTSLLNRHMSLMNRVPDSADFMPLLSVKDEPSSEGEHHLSGEDTNDSSCGRQISPAPRNSPKSWTQQDMELALDALRKHQMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGSAKSWSEADLRGALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLRLALADIRRGASSVQRAAATYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQMQGIPLNQQQPQDLQKTEIDPQPHVHQYYHQMPPTHDHDPLYSMSEYPYNTHMHEQYGQYYQSFNGIATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00041698;
- 90% Identity
- -
- 80% Identity
- -