Basic Information

Insect: Pararge aegeria
Gene Symbol: -
Assembly: GCA_905163445.1
Location: NC:6995951-7020906[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.18 7.5 6.8 0.2 1 23 255 281 255 281 0.92

2 18 0.00062 0.026 14.6 0.2 2 23 353 374 352 374 0.96

3 18 5.7 2.3e+02 2.1 0.7 1 23 378 400 378 400 0.91

4 18 0.003 0.12 12.4 0.7 1 23 405 428 405 428 0.93

5 18 7.2 2.9e+02 1.8 2.0 2 23 435 457 434 457 0.84

6 18 0.00011 0.0046 16.9 1.9 1 23 464 487 464 488 0.97

7 18 0.0025 0.1 12.7 1.4 1 23 493 515 493 515 0.98

8 18 1.5e-05 0.00063 19.7 0.1 1 23 521 544 521 544 0.94

9 18 0.015 0.59 10.3 1.2 1 23 810 832 810 833 0.94

10 18 2.3 93 3.4 0.0 2 23 860 882 859 882 0.88

11 18 0.017 0.68 10.1 0.8 2 23 905 927 904 927 0.94

12 18 7.2e-06 0.00029 20.7 0.3 1 23 931 953 931 953 0.98

13 18 3 1.2e+02 3.0 2.3 1 23 958 981 958 981 0.92

14 18 9 3.7e+02 1.5 0.9 2 19 989 1006 988 1011 0.75

15 18 0.032 1.3 9.2 0.1 1 20 1018 1037 1018 1038 0.95

16 18 0.0023 0.096 12.8 0.7 1 23 1047 1069 1047 1069 0.99

17 18 1.4e-05 0.00057 19.8 1.0 1 23 1075 1097 1075 1097 0.99

18 18 0.0007 0.029 14.4 1.2 1 23 1103 1126 1103 1126 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.18	7.5	6.8	0.2	1	23	255	281	255	281	0.92
2	18	0.00062	0.026	14.6	0.2	2	23	353	374	352	374	0.96
3	18	5.7	2.3e+02	2.1	0.7	1	23	378	400	378	400	0.91
4	18	0.003	0.12	12.4	0.7	1	23	405	428	405	428	0.93
5	18	7.2	2.9e+02	1.8	2.0	2	23	435	457	434	457	0.84
6	18	0.00011	0.0046	16.9	1.9	1	23	464	487	464	488	0.97
7	18	0.0025	0.1	12.7	1.4	1	23	493	515	493	515	0.98
8	18	1.5e-05	0.00063	19.7	0.1	1	23	521	544	521	544	0.94
9	18	0.015	0.59	10.3	1.2	1	23	810	832	810	833	0.94
10	18	2.3	93	3.4	0.0	2	23	860	882	859	882	0.88
11	18	0.017	0.68	10.1	0.8	2	23	905	927	904	927	0.94
12	18	7.2e-06	0.00029	20.7	0.3	1	23	931	953	931	953	0.98
13	18	3	1.2e+02	3.0	2.3	1	23	958	981	958	981	0.92
14	18	9	3.7e+02	1.5	0.9	2	19	989	1006	988	1011	0.75
15	18	0.032	1.3	9.2	0.1	1	20	1018	1037	1018	1038	0.95
16	18	0.0023	0.096	12.8	0.7	1	23	1047	1069	1047	1069	0.99
17	18	1.4e-05	0.00057	19.8	1.0	1	23	1075	1097	1075	1097	0.99
18	18	0.0007	0.029	14.4	1.2	1	23	1103	1126	1103	1126	0.95

Sequence Information

Coding Sequence: aTGAGTTACGTGGAAATTGTTGTTGCAGAAGGTTTTGATAAATGCAAGTGCTGTTTAAGTGAGACAGAGTTGAAAACTTTATGGGCTGAACACGAATTTGAAGGGAATGGGGAGAACTATGGGGAAATGCTAAACGAATGTTTTAGCCTAtcgTGGCAAACTACAGCTTCAGAGTTGATTTGTGAATTGTGCATATCACGATTGAGGGACGCTATCGACTTCAGACGGGAAATTATAGCAACACAGGAGATACTTGAAGAAGGTGTTCATGTTAAGAAGGAGATCGAAGAACCTGCGGAGTATCTTGACGACAACGAATATGCATCTGAAGGTGTTTATTTTGAAGTAATAAAGGAGGAGGAACGTGACATTCCCGTGGAGTACCTTGACGAAGATGAATATGTTCCAGAAGAAATACCTTCGAGTTCACAAGCGTCGTCGCCGGAGCCACGCAAACGGAAATACCCTCCGAAGAAAAAGAAGAGCGAAAGgaataaaacatacaaacagTATTCAAGAAGCAACCTGCTAGAAGCTGTTAGGAAGGTCTGCAGCGGTGAGCTGACCTGCGCAGAGGCCAGCTCGAACTACGGGGTGCCAGTGGCCACGGTGCTTGCCAAGTTCCACGAAGCGGAATCGGAGAAAAAGGGGGTTAACAAAGCCAAAGAAGCGTTGAACGAGAAGCACTACAATCTGATTGAAGACATACAAAAAATCCTCAAATACACCAATGCTATACCGTTCAAAACGAAAGCAAATAGATACTATTGTTTCTATTGCTCCACCGATGGCCAAATCTTTGAAGAGCCAGACGATCTGCGACAACACACCAACACCGTACACTGTGATGAAAGAATCGACGGCATCGAACATTATATGAAGCCTCAATGGTCGAATGAAGTTATAAAGATGGATGTGCACCGCTTGCACTGCACAGAATGCTACGTAAGATTGCCCGATTGGAATGAAATGTTCGTGCATTTCGCCGAAAAGCATAAAGTTGGATTCGATGAGGCCTACACCAAAGTTATACCGTACCCGTTGACATCAGACCTAAAATGTGTCTTGTGTAACAAGGCGTTCAACAACTTCGCTCTACTCGATGCACATATGAATCTGCACTACAGCAATCACATCTGCTATGCTTGCGGTGACACATTCCTGTCCACTAGCAGACTGGAGAAACATTTGCTCGTGCACAAAACTGGCTGTTTTCCATGCAAGATGTGCGATAAGGTGTTCAGTTTGGAGAAGTATGTGTCGAAGCATTACTCTTTGGTGCACGAGCCGAAGTGCACCACGAAATGTTTGTACTGCCCGGAGAAGTTTATAGGGCCATTGCAACGGCACGCGCACGTTTGTGAGAAACACGCGGACAAGGTGAAGACGTACACATGTGAACTGTGTGGCAAAGTGTTCACGTGGAGGGCCTATTTCCTGGCTCACATGCGCAAGCGTCACCACGGCGAGAAGAAATACAAATGCCAGTTCTGCCCCAAAATGTTTCTGATGCAGTACGAACTGAAGAGTCACCTGGTAACGCACACCCGGGAGAGGAAGTTTGTGTGCGGTGAGTGCGGAGAAAGTTTTTCAAGAATGCAGGCTCTAAAGAAACACATTTTGGATAATCATGAAAATAATCATATTAAATCGTATTTACTATCTAATTTTAATGGCAAAGTAATTAATatggggaaaattaaaaagcGTGGCCCCAGGAGGCTATGCAGATGCTGTTTAGAAGAGATTGATCTAAAGGATTTGTGGACTGAGTACTTCAATGACGACGAGAGAGAAGTTTATGGCGAAATGTTAAATGAATGCTTCGGATTGCCAtgGGAGCAGCGTTTTGAAGAGACAGAGTTTATTTGTGACAACTGTGTGGTCCGTCTCCGTGATGCTGTAAGCTTCAAGAAGGAGATCCTTAAATCTGATCAGATACTAaaggaaaactttaaaaatgAAGCCAGTAAGAATGTGAAAGAGGAAGAGGAGTCGGATGCAGAGATTGAGACTGAATATCTGAGCATAGAATACCTTGAAGACGAGGATAATGAAAAAGCTAAGAACATTGTAGAAATCAAAGTTGAGAGGGAAACCTCAAACGAGCCTGATGTGAAACAAGAATCAACTATACAGCCAAAGAGTGGTAGACGTTACACCGAGGATGACTTCAAGAAGTGCATAGAAGCTGTGAAGAGCGGAAAACTCTCGCAGACCAAAGCCTCGATCGTCTACCGTGTCCCCAGGACGACCATCAGACAGGCACTGGCGAttatgcCGCTAGTACTACCTAAAAAatctgaaaagaaaaaaagagatGGTCCGCGCATAAGAGTCGAGTCTAACGTGAAAAAGCGACAGGATAATTTAGACAATCTTACCAAATATACAAACGCTACTCCTTTTAAAGACGTCAGGAAAGGATACATTTGCTATTTCTGTGACAAAGAATATGATTTTCCAGCTGATTTGAAAGAGCACACAATCTTTCATCATTTAAAAGCTTTAGGCGCGGACGCGATGTCGGTCAAAGTTATCTCAGACAGAAGCGTTAAACTCGACGTGACAGATCTGATCTGTGAAATCTGCGGCGAAGGTCTACCAACACTGGAGAGTGCATTCGAACACCTAAGCTTAGAGCACGACGCCGTTATACATAGAGATTCAAAGGACCACTTAGTGCCATTCAAATTTAACGGGAAGTCGCAAAAGTGCGTTGTGTGCGAGATAGTGTTTCCAACTTTCAAACTATTAAACAACCATATACATTTGAAGCATTACACGAACTACGAGTGCCAGATATGCGGCCGGGGTTTCATAAATAAGAGGTCGCTGCAAACGCACGGTTTGACCCACCAAACCGGGAAGTTCCCTTGCCGGCACTGCCCCGACGTGTTCACGACATCCCTTCGCCAGAAACAGCACGAGAGATACATGCATATGGGAAAAAAGAAGCGCAACAAATGCCTGCACTGCGACGAGAAGTTTCTCGATGTGGTGCAGAAGAGGAGGCACGAGTCCGAAGTCCACGGAGTTGCACGGCCGACGTACGAGTGCAACGCATGCGAGAAGAAATACTTCAGTCCAGCCGCTCTGAAAACACACGTCGAATGCTACCATTTAGTCCTGCGTCCGTACAAATGCAGTGAATGCGAATCGAGTTTCTTCACGCCGACGATACTTAAGGCGCATATGCTGAAACATACCGGCGAGAAGAGTTTTCAATGCGACATCTGTAGGAAGAGCTTCGGCAGGAAGACAACTCTGGGACAGCACTTGCGTATACACGCGGACGACAGGCGTTACACTTGCGACCAATGCGGGAGGGGATTCGTCCAGAAGTGCAGTTGGCGTGGGCACATGCTCGCTAAGCACGAGCGAAAAGTTTGA
Protein Sequence: MSYVEIVVAEGFDKCKCCLSETELKTLWAEHEFEGNGENYGEMLNECFSLSWQTTASELICELCISRLRDAIDFRREIIATQEILEEGVHVKKEIEEPAEYLDDNEYASEGVYFEVIKEEERDIPVEYLDEDEYVPEEIPSSSQASSPEPRKRKYPPKKKKSERNKTYKQYSRSNLLEAVRKVCSGELTCAEASSNYGVPVATVLAKFHEAESEKKGVNKAKEALNEKHYNLIEDIQKILKYTNAIPFKTKANRYYCFYCSTDGQIFEEPDDLRQHTNTVHCDERIDGIEHYMKPQWSNEVIKMDVHRLHCTECYVRLPDWNEMFVHFAEKHKVGFDEAYTKVIPYPLTSDLKCVLCNKAFNNFALLDAHMNLHYSNHICYACGDTFLSTSRLEKHLLVHKTGCFPCKMCDKVFSLEKYVSKHYSLVHEPKCTTKCLYCPEKFIGPLQRHAHVCEKHADKVKTYTCELCGKVFTWRAYFLAHMRKRHHGEKKYKCQFCPKMFLMQYELKSHLVTHTRERKFVCGECGESFSRMQALKKHILDNHENNHIKSYLLSNFNGKVINMGKIKKRGPRRLCRCCLEEIDLKDLWTEYFNDDEREVYGEMLNECFGLPWEQRFEETEFICDNCVVRLRDAVSFKKEILKSDQILKENFKNEASKNVKEEEESDAEIETEYLSIEYLEDEDNEKAKNIVEIKVERETSNEPDVKQESTIQPKSGRRYTEDDFKKCIEAVKSGKLSQTKASIVYRVPRTTIRQALAIMPLVLPKKSEKKKRDGPRIRVESNVKKRQDNLDNLTKYTNATPFKDVRKGYICYFCDKEYDFPADLKEHTIFHHLKALGADAMSVKVISDRSVKLDVTDLICEICGEGLPTLESAFEHLSLEHDAVIHRDSKDHLVPFKFNGKSQKCVVCEIVFPTFKLLNNHIHLKHYTNYECQICGRGFINKRSLQTHGLTHQTGKFPCRHCPDVFTTSLRQKQHERYMHMGKKKRNKCLHCDEKFLDVVQKRRHESEVHGVARPTYECNACEKKYFSPAALKTHVECYHLVLRPYKCSECESSFFTPTILKAHMLKHTGEKSFQCDICRKSFGRKTTLGQHLRIHADDRRYTCDQCGRGFVQKCSWRGHMLAKHERKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01151149;
90% Identity: iTF_01151149;
80% Identity: iTF_01151149;