Paeg002425.1
Basic Information
- Insect
- Pararge aegeria
- Gene Symbol
- -
- Assembly
- GCA_905163445.1
- Location
- NC:6995951-7020906[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-06 0.0023 17.2 0.0 4 32 175 203 172 214 0.88 2 2 7.7e-10 1e-06 27.9 0.0 1 34 721 754 721 758 0.94
Sequence Information
- Coding Sequence
- aTGAGTTACGTGGAAATTGTTGTTGCAGAAGGTTTTGATAAATGCAAGTGCTGTTTAAGTGAGACAGAGTTGAAAACTTTATGGGCTGAACACGAATTTGAAGGGAATGGGGAGAACTATGGGGAAATGCTAAACGAATGTTTTAGCCTAtcgTGGCAAACTACAGCTTCAGAGTTGATTTGTGAATTGTGCATATCACGATTGAGGGACGCTATCGACTTCAGACGGGAAATTATAGCAACACAGGAGATACTTGAAGAAGGTGTTCATGTTAAGAAGGAGATCGAAGAACCTGCGGAGTATCTTGACGACAACGAATATGCATCTGAAGGTGTTTATTTTGAAGTAATAAAGGAGGAGGAACGTGACATTCCCGTGGAGTACCTTGACGAAGATGAATATGTTCCAGAAGAAATACCTTCGAGTTCACAAGCGTCGTCGCCGGAGCCACGCAAACGGAAATACCCTCCGAAGAAAAAGAAGAGCGAAAGgaataaaacatacaaacagTATTCAAGAAGCAACCTGCTAGAAGCTGTTAGGAAGGTCTGCAGCGGTGAGCTGACCTGCGCAGAGGCCAGCTCGAACTACGGGGTGCCAGTGGCCACGGTGCTTGCCAAGTTCCACGAAGCGGAATCGGAGAAAAAGGGGGTTAACAAAGCCAAAGAAGCGTTGAACGAGAAGCACTACAATCTGATTGAAGACATACAAAAAATCCTCAAATACACCAATGCTATACCGTTCAAAACGAAAGCAAATAGATACTATTGTTTCTATTGCTCCACCGATGGCCAAATCTTTGAAGAGCCAGACGATCTGCGACAACACACCAACACCGTACACTGTGATGAAAGAATCGACGGCATCGAACATTATATGAAGCCTCAATGGTCGAATGAAGTTATAAAGATGGATGTGCACCGCTTGCACTGCACAGAATGCTACGTAAGATTGCCCGATTGGAATGAAATGTTCGTGCATTTCGCCGAAAAGCATAAAGTTGGATTCGATGAGGCCTACACCAAAGTTATACCGTACCCGTTGACATCAGACCTAAAATGTGTCTTGTGTAACAAGGCGTTCAACAACTTCGCTCTACTCGATGCACATATGAATCTGCACTACAGCAATCACATCTGCTATGCTTGCGGTGACACATTCCTGTCCACTAGCAGACTGGAGAAACATTTGCTCGTGCACAAAACTGGCTGTTTTCCATGCAAGATGTGCGATAAGGTGTTCAGTTTGGAGAAGTATGTGTCGAAGCATTACTCTTTGGTGCACGAGCCGAAGTGCACCACGAAATGTTTGTACTGCCCGGAGAAGTTTATAGGGCCATTGCAACGGCACGCGCACGTTTGTGAGAAACACGCGGACAAGGTGAAGACGTACACATGTGAACTGTGTGGCAAAGTGTTCACGTGGAGGGCCTATTTCCTGGCTCACATGCGCAAGCGTCACCACGGCGAGAAGAAATACAAATGCCAGTTCTGCCCCAAAATGTTTCTGATGCAGTACGAACTGAAGAGTCACCTGGTAACGCACACCCGGGAGAGGAAGTTTGTGTGCGGTGAGTGCGGAGAAAGTTTTTCAAGAATGCAGGCTCTAAAGAAACACATTTTGGATAATCATGAAAATAATCATATTAAATCGTATTTACTATCTAATTTTAATGGCAAAGTAATTAATatggggaaaattaaaaagcGTGGCCCCAGGAGGCTATGCAGATGCTGTTTAGAAGAGATTGATCTAAAGGATTTGTGGACTGAGTACTTCAATGACGACGAGAGAGAAGTTTATGGCGAAATGTTAAATGAATGCTTCGGATTGCCAtgGGAGCAGCGTTTTGAAGAGACAGAGTTTATTTGTGACAACTGTGTGGTCCGTCTCCGTGATGCTGTAAGCTTCAAGAAGGAGATCCTTAAATCTGATCAGATACTAaaggaaaactttaaaaatgAAGCCAGTAAGAATGTGAAAGAGGAAGAGGAGTCGGATGCAGAGATTGAGACTGAATATCTGAGCATAGAATACCTTGAAGACGAGGATAATGAAAAAGCTAAGAACATTGTAGAAATCAAAGTTGAGAGGGAAACCTCAAACGAGCCTGATGTGAAACAAGAATCAACTATACAGCCAAAGAGTGGTAGACGTTACACCGAGGATGACTTCAAGAAGTGCATAGAAGCTGTGAAGAGCGGAAAACTCTCGCAGACCAAAGCCTCGATCGTCTACCGTGTCCCCAGGACGACCATCAGACAGGCACTGGCGAttatgcCGCTAGTACTACCTAAAAAatctgaaaagaaaaaaagagatGGTCCGCGCATAAGAGTCGAGTCTAACGTGAAAAAGCGACAGGATAATTTAGACAATCTTACCAAATATACAAACGCTACTCCTTTTAAAGACGTCAGGAAAGGATACATTTGCTATTTCTGTGACAAAGAATATGATTTTCCAGCTGATTTGAAAGAGCACACAATCTTTCATCATTTAAAAGCTTTAGGCGCGGACGCGATGTCGGTCAAAGTTATCTCAGACAGAAGCGTTAAACTCGACGTGACAGATCTGATCTGTGAAATCTGCGGCGAAGGTCTACCAACACTGGAGAGTGCATTCGAACACCTAAGCTTAGAGCACGACGCCGTTATACATAGAGATTCAAAGGACCACTTAGTGCCATTCAAATTTAACGGGAAGTCGCAAAAGTGCGTTGTGTGCGAGATAGTGTTTCCAACTTTCAAACTATTAAACAACCATATACATTTGAAGCATTACACGAACTACGAGTGCCAGATATGCGGCCGGGGTTTCATAAATAAGAGGTCGCTGCAAACGCACGGTTTGACCCACCAAACCGGGAAGTTCCCTTGCCGGCACTGCCCCGACGTGTTCACGACATCCCTTCGCCAGAAACAGCACGAGAGATACATGCATATGGGAAAAAAGAAGCGCAACAAATGCCTGCACTGCGACGAGAAGTTTCTCGATGTGGTGCAGAAGAGGAGGCACGAGTCCGAAGTCCACGGAGTTGCACGGCCGACGTACGAGTGCAACGCATGCGAGAAGAAATACTTCAGTCCAGCCGCTCTGAAAACACACGTCGAATGCTACCATTTAGTCCTGCGTCCGTACAAATGCAGTGAATGCGAATCGAGTTTCTTCACGCCGACGATACTTAAGGCGCATATGCTGAAACATACCGGCGAGAAGAGTTTTCAATGCGACATCTGTAGGAAGAGCTTCGGCAGGAAGACAACTCTGGGACAGCACTTGCGTATACACGCGGACGACAGGCGTTACACTTGCGACCAATGCGGGAGGGGATTCGTCCAGAAGTGCAGTTGGCGTGGGCACATGCTCGCTAAGCACGAGCGAAAAGTTTGA
- Protein Sequence
- MSYVEIVVAEGFDKCKCCLSETELKTLWAEHEFEGNGENYGEMLNECFSLSWQTTASELICELCISRLRDAIDFRREIIATQEILEEGVHVKKEIEEPAEYLDDNEYASEGVYFEVIKEEERDIPVEYLDEDEYVPEEIPSSSQASSPEPRKRKYPPKKKKSERNKTYKQYSRSNLLEAVRKVCSGELTCAEASSNYGVPVATVLAKFHEAESEKKGVNKAKEALNEKHYNLIEDIQKILKYTNAIPFKTKANRYYCFYCSTDGQIFEEPDDLRQHTNTVHCDERIDGIEHYMKPQWSNEVIKMDVHRLHCTECYVRLPDWNEMFVHFAEKHKVGFDEAYTKVIPYPLTSDLKCVLCNKAFNNFALLDAHMNLHYSNHICYACGDTFLSTSRLEKHLLVHKTGCFPCKMCDKVFSLEKYVSKHYSLVHEPKCTTKCLYCPEKFIGPLQRHAHVCEKHADKVKTYTCELCGKVFTWRAYFLAHMRKRHHGEKKYKCQFCPKMFLMQYELKSHLVTHTRERKFVCGECGESFSRMQALKKHILDNHENNHIKSYLLSNFNGKVINMGKIKKRGPRRLCRCCLEEIDLKDLWTEYFNDDEREVYGEMLNECFGLPWEQRFEETEFICDNCVVRLRDAVSFKKEILKSDQILKENFKNEASKNVKEEEESDAEIETEYLSIEYLEDEDNEKAKNIVEIKVERETSNEPDVKQESTIQPKSGRRYTEDDFKKCIEAVKSGKLSQTKASIVYRVPRTTIRQALAIMPLVLPKKSEKKKRDGPRIRVESNVKKRQDNLDNLTKYTNATPFKDVRKGYICYFCDKEYDFPADLKEHTIFHHLKALGADAMSVKVISDRSVKLDVTDLICEICGEGLPTLESAFEHLSLEHDAVIHRDSKDHLVPFKFNGKSQKCVVCEIVFPTFKLLNNHIHLKHYTNYECQICGRGFINKRSLQTHGLTHQTGKFPCRHCPDVFTTSLRQKQHERYMHMGKKKRNKCLHCDEKFLDVVQKRRHESEVHGVARPTYECNACEKKYFSPAALKTHVECYHLVLRPYKCSECESSFFTPTILKAHMLKHTGEKSFQCDICRKSFGRKTTLGQHLRIHADDRRYTCDQCGRGFVQKCSWRGHMLAKHERKV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01151454;
- 90% Identity
- iTF_01151454;
- 80% Identity
- iTF_01151454;