Paeg002240.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pararge aegeria
Gene Symbol
-
Assembly
GCA_905163445.1
Location
NC:1714557-1717322[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.001 0.041 13.9 6.1 2 23 142 163 141 163 0.97
2 28 2.5e-05 0.001 19.0 3.0 1 23 169 191 169 191 0.98
3 28 3.6e-05 0.0015 18.5 3.7 1 23 197 219 197 219 0.98
4 28 5.5e-08 2.2e-06 27.4 1.3 1 23 225 247 225 247 0.99
5 28 1.1e-05 0.00045 20.1 2.8 1 23 253 275 253 275 0.98
6 28 1.3e-07 5.4e-06 26.2 1.4 1 23 281 303 281 303 0.99
7 28 0.0031 0.13 12.4 7.2 1 23 309 331 309 331 0.98
8 28 2.7e-05 0.0011 18.9 3.3 1 23 337 359 337 359 0.98
9 28 0.00012 0.0051 16.8 1.8 1 23 365 387 365 387 0.98
10 28 1.3e-07 5.4e-06 26.2 1.4 1 23 393 415 393 415 0.99
11 28 6.5e-05 0.0027 17.7 4.2 1 23 421 443 421 443 0.98
12 28 1.8e-05 0.00075 19.4 2.9 1 23 449 471 449 471 0.98
13 28 1.8e-05 0.00075 19.4 2.9 1 23 477 499 477 499 0.98
14 28 5.5e-08 2.2e-06 27.4 1.3 1 23 505 527 505 527 0.99
15 28 1.1e-05 0.00045 20.1 2.8 1 23 533 555 533 555 0.98
16 28 1.3e-07 5.4e-06 26.2 1.4 1 23 561 583 561 583 0.99
17 28 0.0031 0.13 12.4 7.2 1 23 589 611 589 611 0.98
18 28 1.8e-05 0.00075 19.4 2.9 1 23 617 639 617 639 0.98
19 28 0.00012 0.0051 16.8 1.8 1 23 645 667 645 667 0.98
20 28 1.3e-07 5.4e-06 26.2 1.4 1 23 673 695 673 695 0.99
21 28 6.5e-05 0.0027 17.7 4.2 1 23 701 723 701 723 0.98
22 28 1.8e-05 0.00075 19.4 2.9 1 23 729 751 729 751 0.98
23 28 1.8e-05 0.00075 19.4 2.9 1 23 757 779 757 779 0.98
24 28 5.5e-08 2.2e-06 27.4 1.3 1 23 785 807 785 807 0.99
25 28 6.5e-05 0.0027 17.7 4.2 1 23 813 835 813 835 0.98
26 28 1.8e-05 0.00075 19.4 2.9 1 23 841 863 841 863 0.98
27 28 1.8e-05 0.00075 19.4 2.9 1 23 869 891 869 891 0.98
28 28 2.3e-06 9.6e-05 22.2 2.8 1 23 897 919 897 919 0.98

Sequence Information

Coding Sequence
ATGAACCAAGCCAAACGAGTTGAATGTGACACCGATAAGGAAACCCAACGAAAACATGATGTGAAAAATGAAACAGAGAACGTAACCGACAAGCGTAAGTATGTACCGCCGATGAAAAAAACATATGAAATTCAAAACGAATTAAGCACCCAAATTGATGAAAAGATcgaagattttaataattcgacGTGCATAACAGAACCGGCGACAAAAAGAGCTAAGTACACAGAACCCATTGTGAATaaaatcgaaaataaaaaaacacatacagCCCATAAAAAAGTTATGGAAACTCTACTCAATTCTAAccccaaaaatattaatataatattactacaaAATGATATTCGTCAGTATAGTTATaccccaaaaaaaaatttagataatAACTTGATTTTACACACACACGACAAAAACGAATTAAAGTGTAACCGTTGTGGACATACGACCAATAAGAAATCTCACTTGATATCTCATTTGAAAACTCACACTGGTGAGAAACCGTTTTCATGTAATATTTGTGATTACAAATGTATAACAAGCAGTGGCTTAAAGAAACACGTGAAAACACACACTGGTGAGAAACCGTTCTCTTGTAAAGTGTGTGATTACAAATGTATCACAAGAAGTGGCTTAAAGAAACACGTGAGAACACATACTGGTGAGAAACCGTTTACGTGTAACGTGTGTGATTACAAATTTATACAAAGCGGCGACTTGAAGAGACACATGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGCAGTGCCTTAAAGAAACACGTGAGAACACACACTGGGGAGAAACCTTTTACGTGTAACGTGTGTGATTACAAATTTATACAAAGCGGCGACTTGAAGAGACACATGAAAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTAGAGATACCTGTAAATTGAAGACACACATAAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGAAGTGGCTTAAAGAAACACGTGAGAACACACACCGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTGCAAGCAGTGCCTTAAGGAAACACGTGAGAACACACACTGGTGAGAAACCGTTTACGTGTAACGTGTGTGATTACAAATTTATACAAAGCGGCGACTTGAAGAGACACATGAAAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTAGAGATACCGGTAAATTGAAGACACACATGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGCAGTGGCTTAAAGAAACACGTGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGCAGTGGCTTAAAGAAACACGTGAGAACACACACTGGTGAGAAACCGTTTACGTGTAACGTGTGTGATTACAAATTTATACAAAGCGGCGACTTGAAGAGACACATGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGCAGTGCCTTAAAGAAACACGTGAGAACACACACTGGGGAGAAACCTTTTACGTGTAACGTGTGTGATTACAAATTTATACAAAGCGGCGACTTGAAGAGACACATGAAAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTAGAGATACCTGTAAATTGAAGACACACATAAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGCAGTGGCTTAAAGAAACACGTGAGAACACACACCGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTGCAAGCAGTGCCTTAAGGAAACACGTGAGAACACACACTGGTGAGAAACCGTTTACGTGTAACGTGTGTGATTACAAATTTATACAAAGCGGCGACTTGAAGAGACACATGAAAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTAGAGATACCGGTAAATTGAAGACACACATGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGCAGTGGCTTAAAGAAACACGTGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGCAGTGGCTTAAAGAAACACGTGAGAACACACACTGGTGAGAAACCGTTTACGTGTAACGTGTGTGATTACAAATTTATACAAAGCGGCGACTTGAAGAGACACATGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTAGAGATACCGGTAAATTGAAGACACACATGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGCAGTGGCTTAAAGAAACACGTGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTGTGTGATTACAAATGTATTACAAGCAGTGGCTTAAAGAAACACGTGAGAACACACACTGGTGAGAAACCGTTCTCTTGTAATGTTTGTGATTACAAATGTATACAAAGCGGCGACTTGAAGAGACACATGAGAACACACCTATTTTAG
Protein Sequence
MNQAKRVECDTDKETQRKHDVKNETENVTDKRKYVPPMKKTYEIQNELSTQIDEKIEDFNNSTCITEPATKRAKYTEPIVNKIENKKTHTAHKKVMETLLNSNPKNINIILLQNDIRQYSYTPKKNLDNNLILHTHDKNELKCNRCGHTTNKKSHLISHLKTHTGEKPFSCNICDYKCITSSGLKKHVKTHTGEKPFSCKVCDYKCITRSGLKKHVRTHTGEKPFTCNVCDYKFIQSGDLKRHMRTHTGEKPFSCNVCDYKCITSSALKKHVRTHTGEKPFTCNVCDYKFIQSGDLKRHMKTHTGEKPFSCNVCDYKCRDTCKLKTHIRTHTGEKPFSCNVCDYKCITRSGLKKHVRTHTGEKPFSCNVCDYKCIASSALRKHVRTHTGEKPFTCNVCDYKFIQSGDLKRHMKTHTGEKPFSCNVCDYKCRDTGKLKTHMRTHTGEKPFSCNVCDYKCITSSGLKKHVRTHTGEKPFSCNVCDYKCITSSGLKKHVRTHTGEKPFTCNVCDYKFIQSGDLKRHMRTHTGEKPFSCNVCDYKCITSSALKKHVRTHTGEKPFTCNVCDYKFIQSGDLKRHMKTHTGEKPFSCNVCDYKCRDTCKLKTHIRTHTGEKPFSCNVCDYKCITSSGLKKHVRTHTGEKPFSCNVCDYKCIASSALRKHVRTHTGEKPFTCNVCDYKFIQSGDLKRHMKTHTGEKPFSCNVCDYKCRDTGKLKTHMRTHTGEKPFSCNVCDYKCITSSGLKKHVRTHTGEKPFSCNVCDYKCITSSGLKKHVRTHTGEKPFTCNVCDYKFIQSGDLKRHMRTHTGEKPFSCNVCDYKCRDTGKLKTHMRTHTGEKPFSCNVCDYKCITSSGLKKHVRTHTGEKPFSCNVCDYKCITSSGLKKHVRTHTGEKPFSCNVCDYKCIQSGDLKRHMRTHLF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01151723;
90% Identity
iTF_01151723;
80% Identity
iTF_01151723;