Pmar017712.1
Basic Information
- Insect
- Paracoccus marginatus
- Gene Symbol
- Kdm5
- Assembly
- GCA_900065295.1
- Location
- FIZT01014892.1:19242-24014[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-23 4.6e-20 72.0 0.1 3 89 122 204 120 204 0.94 2 2 1.8 5.3e+03 -1.9 0.0 4 62 1221 1294 1219 1307 0.45
Sequence Information
- Coding Sequence
- ATGAAGAGTTTCAAAAAGCAAATGTTCGTCGAGGCTAAAAATCCTGACGTAAGTTCGGGTCAAACATCGTCGTCGAATTCTTCTAATCCCAATTCGTTTATCGATCCTGCTACGTACATGTCGAACGGCAAATTCGTGTTTAGAGTACCGCCTGAAGCTCCAGTATTTGAACCGTCTGTAGAAGAATTTCTCGATCCGCTAGCTTACATCAATAAAATTAGACCTGTTGCCGAGAAAACCGGAATTTGTAAAGTTAAACCACCGCCAGAATGGCATCCTCCATTCGCCGTCGACGTAGACCACTTCAAGTTTACTCCtcgtattcaaaaattgaacgaattagACGCAAATACGAGAGTAAAACTGTACTTCTTGGATCGTTTGGCTACGTACTGGAATTATAGTGGTGTTCAAATACGTATTCCCGCTATAGAAGATAAAACGGTCGATATGTATTCACTTTATAAAATAGTTGAATTGGAAGGAGGATTTGACAAGATAAATTCAGAAAAGAAATGGTCCAAGGTAGCTCTTCGAATGGGTTACACGAGTGATAAGAACGTCGGTTCGCAGCTGCGTACGCATTACAAACGTCTTCTTCTACcgtatgaaaaattcgaaaaaagtaaactgaAAAGCGTGCaagaaaacgaagaaaataaaaaagctgCATTCGCCTCCGCTTCCACTGGCACCACCATTAAAAACGAACCAGCGGAAacggtgaaaataaaaagcgaACCTGGTGTTCGAGAAATAGGCGGAAAAAACTGCGGCAATAGCCGCCGTTGCACGCGTTCGAATTGCGATGAAAACGGTaccgaaattttggtcagCGATACGTTCAAAAATCCTACAATGCaagataaaaataaagaattgcAAAGGCTGACATTTTACGGACCTGGGCCGAAAATATTAGGCtcgaacaaaaaacaaaattctccCAGTAAAAAGAAATCTGATTCCAACCAAGATGACCTGTTGGCCGATTCAGCGTGTATGGTTTGTGGTAACGGCGAATCAGAAGAATGCATTTTGCTGTGCGATGGTTGCGACGACGGTTACCATACGTTTTGTCTAGTTCCACCTTTGACGTCTGTGCCAAAGGGTGAATGGCGGTGCCCTAAATGTATCGCAGCCGTGGTTAGTAAAGCCGCCGATACTACGTTTGGGTTCGAGCAAGCTGAAAGAGAGTATTCTCTGCAGCAGTTCGGTGAAATGGCCGATCAGTTCAAGTCCAATTATTTCAACATGCCCGTGCATTTAGTACCCACTGAGAAAGTCGAACAAGAATATTGGAAGATTTTATCGTCAATGGACTCTAGCGTTACGGTAGAATACGGCGCAGATTTGCACAGCATGGATCACGGTTCCGGATTTCCTACCCAGatggcgttgaaaaattccggcGACGAAAATCATTACTATAAATCTTACGTTGAGTCCAGCTGGAACTTGAACAACATACCGGTACTCGAAGGCTCCGTGTTGGGTTACATCAACGCAGATATTTCTGGTATGAAAATACCATGGATGTACGTCGGTATGTGCTTTTCGACGTTTTGCTGGCACAACGAAGACCACTGGAGTTATTCGATCAATTATTTACACTGGGGTGAACCTAAAACGTGGTACGGTGTCCCCGGTTCGCAGGCCGAACAATTCGAGAAGGTGATGCAAGAAACTACGCCAGACTTATTTCGAAATCAACCCGATTTATTGCATCAGCTGGTTACTATACTGAATCCGAATATATTAATGGATCGAGGGGTACCGGTCTATCATATCGATCAAGCTGCCGGAGAATTCGTCCTAACATTCCCGAGAGCCTATCACGCCGGCTTCAACCACGGTTATAATTTTGCCGAAGCGGTGAATTTCGCACCAGTCGATTGGATACCTCTTGGTAGAGATTGCGTCGAACATTACTCCAGTCTACATAGGTATTGCGTGTTCTCGCACGACGAACTCATCTGTAAAATGGCCTCGGTGccggaaaatttgaattctaaaTTGGCTTTAGCCACGCATCAGGATATGTTGAAAATGCTCGAAGccgaaaataaacaaagaaaGGCGCTTTTAGAATGGGGCGTGGTCAACGCGGAACGTGAAGCTTTCGAATTGTTGGCCGATGACGAACGTCAATGCGCCGAATGTAACACCACTTGTTTTCTGTCGGCCGTCACCTGCAAGTGTAGTCCGAAACGAGTGACGTGTCTGCGTCACTTTAAAGATCACTGCGGATGTCCGGCCATCGACCATACACTACGATATCGTTATACCTTGGACGAATTACCAGTTATGTTGGAAAAGCTGAAAGAAAAGGCGGATTCGGTAGCTTCGTGGGCTGCCAAAGTTCACGACGCGTTAGACGTGAGTACACCCAGAACTACGACGTTGACCGGACTCAAAGAGTTATTAAATGAAGCTCGCGAAAAGCATTTTCCTGACGATTTGTCATTGAATTTATTATCGAAAGCGATTAAATCTGTGCAGGATGCTTTAGCCGTCGACTTCAAAAACATTCTGTCGCGTAAACAAACACTTGACAAGAAAGTCACTCTAACTGAAATTCAAAGTTATTACGAAGAATTACAGCGTATACCTTGCGTCCTACCTCAGGAGAATACCGTCAAACACTTCCTGAAGTTCTTAGacgatttcagaaaaaacactaaaataatattacgtaAAGAAAACGCTACGGTTAGCGAAGTTGAAAACCTACTCAAACAAGGTAATTTCCCCAATGTTGAAATACCGTGCatcgaagaattgaaaaatcacaaaaaagtgCTTTATTTAATAGAAGAATACGAAGAGAAGAAAGGAAATACCTCTTTGCTAACTCCTCAAGTTATTAATCAGCTTATCGCCTGCAGTAGTAGCATACCGAATGCTAATGATAATGAACGCGTCGTCTCCGTTACCAAAGAATTAATGGCCATCAAAGAAAAGGTAGACGCATGGGAAAAGAAAGCGGCCAGCAGCTTGCAAATCAACGTTACCACTAAGCAAATGACCAATGGCGCTAAATTATCGCTCAACAGTTTGGAAAAGTTGCTCGACGAAGCCAATACAATAGGCGCGTCTTTACCCAGCAAAGATAAACTGCAAAGTatcgttaaaaaaatctacgttTGGAAAGAACGTGTAAACGGTCTTTTTGGACCGAAGAAAGCTGCTCCATTCCTAGAAGTTATTGAAAACTTGTTAGAAGAAGGTCAAAACATGGGCGTCGAATTAGAAGaaataggtaaattgaaaaacgtctTGACCAAAGCGTTATCGTGGAAAGAAGAAGTATATAAGTTATTTTTGGGCGATaccaaattattcaatttgttAGAAGTGCTAATGCCGCGTCGTAATTTACAACGAATTTGCAAGTATAAGAAAAACGATAAACCAAACGCCACCGAACCATCTCCTACCTTCGGCGCGTTCGATTTCAATATCAAAGAAAACTTCGATCAAGACAAAGTCGTCTCTTCCTtcaaaatcgctgaaaaacgCGAATTCGAGTTGATGCGTGCTCTGCGAGTGAAAAACACGTACAAAAAGAAACAAGGCGACGGGACGTTCTGCGTTTGCAATGTCTCGTCAACGGTATACATGAAGGAGTGCATTCTGTGTAAAGATCTATTTCACGAGCAGTGCTTGAAGCAGTTGGCTAATTACTGGGAAGATATTAAGAAATCCAATAATCGGATATTTTTATGTCCATTTTGTCAGCGATCCAGAAGGCCGAATTCTAAAACTGTGATGAACGCGCTAATTAAActgcaaaaaatacaaatacgtacgcTGGAAGGCGTTGCTATGCAATGTCTTCTCGATCGCGAATCCAAATGGAAAGAATGTGTCAACGAATTGCTGAGTACGCCCGAACTGAGCGTATTGGGTAAAATGTCAGCCGATCCGATTTCAAAGCTCGCCAAACACAACGGCCCAGTCGCGCTAAGCAGCGAAAACAAAACCAGCCTAGAATCGCTACTATTCCGAGGTTTTCTGCTGGAATTAGAACTGCCCgataacgaattaatttttatgataCTGCATAAATTAGATTCGAGCGCGGATACCACGAGTCAACactcgaattcgaattcgtgTAAGCCCTTCAGTCTACACTCCAGCTTTGATAAATCCAAAGTCGAGCTTGAATTGACCAACGAAACGtcgtctttgaaaaatgagctaaCTCCGGTAGCCATACTACCCAAGGATCGTAAACGTAAACACGTAGTacaagaaaataatgaaaacgaaatGTATCTAAGCAAAAATGTTACGTCTACCGCAACGACCAAAgttaaaaagaaagaaaatactgTTCGTAAACGAGTCAGAAAGCAGAACATGTCgccgtataaaaataaattatccgCAGCCGAATCGAAGCCGCAACGAGAATTGGCCGAGAAGAGTATTTCGTCCATCATCTGCATATCGTCGCCGGAAAGAAGTGATAAGACAGATGACGAAGTCGACGATGAAGAAGAAAGCGAATGCGTCGCCACGAAATGTTTGAAACCCACCGGAGAACTCGTCGAATGGGTGCAATGCGATTACTGCAAAAACTGGTTGCATATGATTTGCATAGGagttacgaaaattgaaatcgataaCCAAACCGAATTTATGTGTACGCTGtgtaaaaatgtcgaaaaagcCAAAAACGAAGAGGAAGATGACgacgaagaagacgacgaTGTTGTATTCGTCGAGTACGCTCCGACTAGTACTACTTTATGTTCCTCGTAG
- Protein Sequence
- MKSFKKQMFVEAKNPDVSSGQTSSSNSSNPNSFIDPATYMSNGKFVFRVPPEAPVFEPSVEEFLDPLAYINKIRPVAEKTGICKVKPPPEWHPPFAVDVDHFKFTPRIQKLNELDANTRVKLYFLDRLATYWNYSGVQIRIPAIEDKTVDMYSLYKIVELEGGFDKINSEKKWSKVALRMGYTSDKNVGSQLRTHYKRLLLPYEKFEKSKLKSVQENEENKKAAFASASTGTTIKNEPAETVKIKSEPGVREIGGKNCGNSRRCTRSNCDENGTEILVSDTFKNPTMQDKNKELQRLTFYGPGPKILGSNKKQNSPSKKKSDSNQDDLLADSACMVCGNGESEECILLCDGCDDGYHTFCLVPPLTSVPKGEWRCPKCIAAVVSKAADTTFGFEQAEREYSLQQFGEMADQFKSNYFNMPVHLVPTEKVEQEYWKILSSMDSSVTVEYGADLHSMDHGSGFPTQMALKNSGDENHYYKSYVESSWNLNNIPVLEGSVLGYINADISGMKIPWMYVGMCFSTFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEQFEKVMQETTPDLFRNQPDLLHQLVTILNPNILMDRGVPVYHIDQAAGEFVLTFPRAYHAGFNHGYNFAEAVNFAPVDWIPLGRDCVEHYSSLHRYCVFSHDELICKMASVPENLNSKLALATHQDMLKMLEAENKQRKALLEWGVVNAEREAFELLADDERQCAECNTTCFLSAVTCKCSPKRVTCLRHFKDHCGCPAIDHTLRYRYTLDELPVMLEKLKEKADSVASWAAKVHDALDVSTPRTTTLTGLKELLNEAREKHFPDDLSLNLLSKAIKSVQDALAVDFKNILSRKQTLDKKVTLTEIQSYYEELQRIPCVLPQENTVKHFLKFLDDFRKNTKIILRKENATVSEVENLLKQGNFPNVEIPCIEELKNHKKVLYLIEEYEEKKGNTSLLTPQVINQLIACSSSIPNANDNERVVSVTKELMAIKEKVDAWEKKAASSLQINVTTKQMTNGAKLSLNSLEKLLDEANTIGASLPSKDKLQSIVKKIYVWKERVNGLFGPKKAAPFLEVIENLLEEGQNMGVELEEIGKLKNVLTKALSWKEEVYKLFLGDTKLFNLLEVLMPRRNLQRICKYKKNDKPNATEPSPTFGAFDFNIKENFDQDKVVSSFKIAEKREFELMRALRVKNTYKKKQGDGTFCVCNVSSTVYMKECILCKDLFHEQCLKQLANYWEDIKKSNNRIFLCPFCQRSRRPNSKTVMNALIKLQKIQIRTLEGVAMQCLLDRESKWKECVNELLSTPELSVLGKMSADPISKLAKHNGPVALSSENKTSLESLLFRGFLLELELPDNELIFMILHKLDSSADTTSQHSNSNSCKPFSLHSSFDKSKVELELTNETSSLKNELTPVAILPKDRKRKHVVQENNENEMYLSKNVTSTATTKVKKKENTVRKRVRKQNMSPYKNKLSAAESKPQRELAEKSISSIICISSPERSDKTDDEVDDEEESECVATKCLKPTGELVEWVQCDYCKNWLHMICIGVTKIEIDNQTEFMCTLCKNVEKAKNEEEDDDEEDDDVVFVEYAPTSTTLCSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01490762;
- 90% Identity
- iTF_01472265; iTF_00725290; iTF_00194090; iTF_01490762;
- 80% Identity
- -