Basic Information

Gene Symbol
Kdm5
Assembly
GCA_959613365.1
Location
OY390715.1:43812886-43817664[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-23 4.8e-20 71.9 0.1 3 89 122 204 120 204 0.94
2 2 0.37 9.3e+02 0.5 0.0 3 62 1226 1299 1225 1321 0.48

Sequence Information

Coding Sequence
ATGAAGAGTTTTAAAAAGCATATGTACGTCGAGGCTAAAAATCCAGACGCCAGTTTCGATCAGACATCGTCGTCGAATTCTTCTCATCCTAAATCGTTTATTGATCCCGCCACGTACATGTCGAACGGTGAATTCGTATTTCGTGTGCCGCCAGAAGCTCCTGTATTCGAACCGTCTGTGGAGGAATTCCTCGATCCGTTGGCTTACATTAATAAAATCAGGCCGGTAGCCGAGAAGACGGGAATCTGTAAAGTTAAACCGCCACCGGAATGGCATCCACCCTTCGCGGTCGACGTAGATCACTTCAAGTTTACTCCTCGTATTCAAAAGTTGAACGAGTTGGACGCGAATACGAGAGTAAAATTGTACTTCTTGGATCGCTTAGCGACGTACTGGAACTACAGCGGTGTTCAAATACGTATTCCCGCTATCGAAGATAAAACTGTCGATATGTATTCGCTGTATAAAATAGTCGAATTAGAAGGAGGATTCGATAAGATAAATATGGAGAAGAAATGGCCCAAGGTAGCTCTGCGAATGGGTTACACGAGCGATAAAAACGTCGGTTCGCAACTACGTACGCACTACAAACGTCTTCTTCTACCGTAcgagaaattcgaaaaaagcaAACTGAAAAGCGCTCAAGAAAACGAAGAAGCTAAAAAAGCCGCCCTCGCATCCTCTTCCCCTACTCTCAACGTCAAAAAAGATTCGCCCGAATCGGTTAAAATAAAAAGCGAACCTGGTGTTCGAGACATCGGCGGTAAAAATTGCGCCGCCGGCAGACGTTGCACGCGTTCAAATTGCGACGAAAATGGTACCGAAATTTTGGTCAGCGATACGTTTAAAAATCCAACGATGCAAGATAAAAACAAAGAATTACAGAGGTTAACATTTTACGGACCAGGACCGAAAATATTGGGCTCGAATAAAAAGCAAAATTCTCCCAGTAAAAAGAAATCCGAATCCGGTCAAGACGATCTGTTGGCCGATTCGGCGTGTATGGTTTGTGGCAACGGCGAATCGGAGGAGTGTATTTTACTCTGTGACGGTTGCGACGATGGTTATCATACGTTTTGCTTAGTTCCACCTTTGACATCTGTACCAAAGGGCGAATGGCGTTGCCCTAAATGTATCGCTGCCGTCGTTAGTAAAGCTACCGATACTACGTTCGGTTTCGAGCAAGCTGAAAGGGAATATTCTCTGCAGCAATTTGGCGAAATGGCCGATCAGTTTAAATCCAACTATTTCAACATGCCCGTTCATTTGGTACCCACTGCGAAAGTCGAACAAGAATATTGGAAGATATTGTCGTCGATGGACTCGAGCGTTACGGTAGAATACGGCGCAGATCTGCACAGTATGGATCACGGTTCCGGATTTCCTACTCAGATGGCGTTGAAAAATTCCGGCGACGAAAATCATTACTACAAATCTTACGTCGAATCCAGCTGGAACCTAAATAACATACCGGTGCTCGAAGGCTCCGTATTGGGCTACATCAACGCCGATATTTCCGGTATGAAGATACCGTGGATGTACGTCGGTATGTGCTTTTCAACGTTCTGCTGGCATAACGAAGACCACTGGAGTTATTCGATCAATTATTTACACTGGGGCGAGCCCAAAACCTGGTACGGTGTTCCCGGTGCGCAAGCCGAACAATTCGAAAAAGTTATGCAAGAAACTACCCCAGACCTGTTTCGAAATCAACCCGATTTATTGCATCAGCTGGTTACTATACTGAATCCGAATATACTAATGGATCGAGGCGTGCCTGTCTATCATATCGATCAAGCTGCCGGCGAATTTGTGCTAACCTTCCCCCGAGCCTATCACGCCGGCTTTAACCACGGCTATAATTTCGCCGAAGCGGTCAATTTCGCGCCAGTCGATTGGATACCTATTGGCAGAGATTGCGTCGAACACTATTCCAGTCTACATCGATATTGCGTATTCTCGCACGACGAACTTATCTGCAAAATGGCCTCGGTGCCGGAAAGCTTGAATTCCAAATTGGCCTTAGCTACGCATCAGGATATGTTGAAAATGCTCGACGCCGAAAACAAACAAAGAAAAGCCCTGCTAGAATGGGGCGTGGTGAATGCGGAACGTGAAGCGTTCGAATTGCTGGCCGATGACGAACGTCAATGCGCCGAATGTAACACAACCTGCTTCCTCTCAGCCGTCACCTGCAAATGTAGTCCGAAAAGAGTTACGTGTCTGCGTCACTTCAAAGATCACTGCGGATGTCCGGCCATCGATCATACGCTACGATACCGTTACACCTTGGACGAATTACCAGTCATGTTGGAAAAGCTAAAAGAGAAGGCAGATTCGGTTGCTTCGTGGGCTGCCAAGGTTCACGACGCGTTGGACGTGAGCACTCCCAGAATTACCACTTTGACCGGACTCAAAGAATTACTAAACGAAGCTCgcgaaaaacattttcccgACGATTTGTCGCTGAATTTATTATCGAAAGCCATCAAATCCGTTCAAGACGCTTTGGCCgtcgatttcaaaaacattctaTCTCGTAAACAAACGCTAAACAAGAAGGTCACGTTGACTGAAATTCGAAGTTATTACGAAGAATTACAACGTATACCGTGCGTGCTACCTCAAGAAAATACCGTcaaacactttttgaaatttttagacgatttccaaaaaaacaccgaCAATATATTGCGTAAAGAGAACGCCACCGTTAGCGACGTCGAAAATCTTCTCAAGCAAGGTAATTTTCCCAACGTCGAAATACCTTGCatcgaagaattgaaaaatcacaaaaaagtcATCTATCTGATAGAAGAATTCAAAGAGAAATGGAAGAATCCCTCTTCGCTAACTCCTCAAGTTATCAATCAGCTGATCGCTTGTAGTAATACCATACCCAATGCCAACTCTATCGACCGCGTCGCCTCCGTTACCAAAGAATTGATCGCGATCAAGGAAAAGGTAGACGCTTGGGAAAAGAAAGTGTCCATCTGTTTGAATCTCGTTACCAATAAGCAACCAACAAACGGTGCTAAATTATCGCTAAACactttggaaaagtttctcgACGATGGTAATGCCATAAATGCCTTTCTACCCACTAAAGAAAGATTACAAACTATCATTAAAAAAGCCTACGCTTGGAAAGAACGCGTCAATGGTCTGTTCGGACCGAAGAAAGCTGCCCCGTTTTTAGAATTCGTCGAAAATCTGGTCGAAGAAGGCCAAAATATGGGCGTCGAGTTGGAAGAAATAGTTAAACTGAAAGGCGTCTTGGCCAAAGCGTTATCGTGGAAAGACGAAGCATACAAGTTATTTTTGGGCGATactaaattatttaatttgctAGAAGTATTAATGCCGCGTCGTAATTTACAACGCATATGCAAATataaaaagaacgaaaaaccAAACTCGACCGAACCACCAAACTCGACCGAACCGTCTCCCGCCTTCGGCGCATTCGATTTCAACATCAAAGAAAACAACTTCGATCAAGAGAAAGTCGTGTGTTCTTTCAAAGTGGCCGAAAAACGAGAATTCGAGCTAATGCGCGCTCTGCGAGTGAAAAACAcgtataaaaagaaacaaggcGACGGTACGTTCTGTATTTGCAACGTCTCCTCGACGGTATACATGAAGGAATGTATACTATGTAAAGATCTATTCCACGAGCAATGCTTGAAGCAGCTGGCTAATTACTGGGAAGATAAGAAAACCAATCATCGTATATTTTTATGCCCATTCTGCCAACGATCCAAAAGACCAAATTCCAAAGCTGTGATGAACGCGTTAATTAAGctgcaaaaaatacaaattcgtACCCTCGAAGGTGTCGCCATGCAATGTCTTCTGGATCGCGAAGCCAAATGGAGAGAATTGGTCAACGAACTACTCAGCACGCCCGAACTGAGCGTATTGGCTAAAAATTCGGCCGATGCTATTGCCAAACTGGCGAAAAATAACTGCCCGGTCGCGCTGAGCAACgagaataaaaatagtttAGAATCGTTACTATTTCGAGGATTCCTGCTAGAATTAGAACTGCCCGataacgaaataatttatatGATATTGAATAAACTAGATTCGAGCTCGGATAGCGCGAATCAGCATTCGAATTCGAACTCGTGTAAGCCCTTCAGTCAACACGCCGGCTTCGATAAGTCCAAAGTCGAGCTCGAGTTGACCAACGAAACGTCTTCGATGAAGAACGAATTAACTCCGGTTGCGATACTATCGAAAGATCGTAAACGTAAACACATCGTAccagaaaataacgaaaatgaAATGTACCTTAGCAAAAATATAGCTCCGACTGCCACTACCAAagttaaaaagaaagaaagcaCGGTTCGTAAACGAGTCAGAAAACAGAATATGTCTCCGTATAAGAGTAAACCGTCGGCGGCTGAATCGAAACAGCAACGAGAATTAGTCGAGAAAAGCATTTCGTCCATTATTTGTCTATCGTCGCCCGAAAGAAGCGAAAAGACcgacgacgaagacgaagaAGAAAGCGAATGCGTAGCGacgaaatgtttgaaaccCACCGGAGAGCTCGTCGAATGGGTGCAATgcgattattgtaaaaattggttgCATATGGTCTGCATAGGAGTTACGAAAGTCGAAATCGATAACCAAACCGAATTCATGTGCACGCTGtgtaaaaatgtagaaaaagcCAAAAACGACGAGGAGTCGGATGACGAGGAAGATGACGACGTCGTGTTCGTCGAATACGCTCCTAATACAACCCTATGTTCCTCGTAG
Protein Sequence
MKSFKKHMYVEAKNPDASFDQTSSSNSSHPKSFIDPATYMSNGEFVFRVPPEAPVFEPSVEEFLDPLAYINKIRPVAEKTGICKVKPPPEWHPPFAVDVDHFKFTPRIQKLNELDANTRVKLYFLDRLATYWNYSGVQIRIPAIEDKTVDMYSLYKIVELEGGFDKINMEKKWPKVALRMGYTSDKNVGSQLRTHYKRLLLPYEKFEKSKLKSAQENEEAKKAALASSSPTLNVKKDSPESVKIKSEPGVRDIGGKNCAAGRRCTRSNCDENGTEILVSDTFKNPTMQDKNKELQRLTFYGPGPKILGSNKKQNSPSKKKSESGQDDLLADSACMVCGNGESEECILLCDGCDDGYHTFCLVPPLTSVPKGEWRCPKCIAAVVSKATDTTFGFEQAEREYSLQQFGEMADQFKSNYFNMPVHLVPTAKVEQEYWKILSSMDSSVTVEYGADLHSMDHGSGFPTQMALKNSGDENHYYKSYVESSWNLNNIPVLEGSVLGYINADISGMKIPWMYVGMCFSTFCWHNEDHWSYSINYLHWGEPKTWYGVPGAQAEQFEKVMQETTPDLFRNQPDLLHQLVTILNPNILMDRGVPVYHIDQAAGEFVLTFPRAYHAGFNHGYNFAEAVNFAPVDWIPIGRDCVEHYSSLHRYCVFSHDELICKMASVPESLNSKLALATHQDMLKMLDAENKQRKALLEWGVVNAEREAFELLADDERQCAECNTTCFLSAVTCKCSPKRVTCLRHFKDHCGCPAIDHTLRYRYTLDELPVMLEKLKEKADSVASWAAKVHDALDVSTPRITTLTGLKELLNEAREKHFPDDLSLNLLSKAIKSVQDALAVDFKNILSRKQTLNKKVTLTEIRSYYEELQRIPCVLPQENTVKHFLKFLDDFQKNTDNILRKENATVSDVENLLKQGNFPNVEIPCIEELKNHKKVIYLIEEFKEKWKNPSSLTPQVINQLIACSNTIPNANSIDRVASVTKELIAIKEKVDAWEKKVSICLNLVTNKQPTNGAKLSLNTLEKFLDDGNAINAFLPTKERLQTIIKKAYAWKERVNGLFGPKKAAPFLEFVENLVEEGQNMGVELEEIVKLKGVLAKALSWKDEAYKLFLGDTKLFNLLEVLMPRRNLQRICKYKKNEKPNSTEPPNSTEPSPAFGAFDFNIKENNFDQEKVVCSFKVAEKREFELMRALRVKNTYKKKQGDGTFCICNVSSTVYMKECILCKDLFHEQCLKQLANYWEDKKTNHRIFLCPFCQRSKRPNSKAVMNALIKLQKIQIRTLEGVAMQCLLDREAKWRELVNELLSTPELSVLAKNSADAIAKLAKNNCPVALSNENKNSLESLLFRGFLLELELPDNEIIYMILNKLDSSSDSANQHSNSNSCKPFSQHAGFDKSKVELELTNETSSMKNELTPVAILSKDRKRKHIVPENNENEMYLSKNIAPTATTKVKKKESTVRKRVRKQNMSPYKSKPSAAESKQQRELVEKSISSIICLSSPERSEKTDDEDEEESECVATKCLKPTGELVEWVQCDYCKNWLHMVCIGVTKVEIDNQTEFMCTLCKNVEKAKNDEESDDEEDDDVVFVEYAPNTTLCSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01490762;
90% Identity
iTF_01150137;
80% Identity
-