Basic Information

Insect: Papilio xuthus
Gene Symbol: Hr39
Assembly: GCA_000836235.1
Location: NW:5648461-5662024[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2 1.4e+04 -7.0 8.7 98 161 271 311 130 354 0.57

2 4 6.4e-08 0.00046 19.4 0.1 1 20 436 455 436 461 0.91

3 4 0.26 1.9e+03 -2.4 0.0 82 113 487 518 457 527 0.65

4 4 6.7e-64 4.8e-60 203.8 0.0 204 408 559 764 487 764 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2	1.4e+04	-7.0	8.7	98	161	271	311	130	354	0.57
2	4	6.4e-08	0.00046	19.4	0.1	1	20	436	455	436	461	0.91
3	4	0.26	1.9e+03	-2.4	0.0	82	113	487	518	457	527	0.65
4	4	6.7e-64	4.8e-60	203.8	0.0	204	408	559	764	487	764	0.94

Sequence Information

Coding Sequence: ATGCAAGGGAAGAATAAGACGATGTCGAGTGATGGTGACTCGGTGAAGGTGGAAGGGGGCCATGTGTCCGTCACCACTATCAGCATGTCGGGCCCCGAGACCAGCGATGGTCAATTCTCGTATAGTTCGAGCGGAGTGCGCATCAGCGTGTCTTCGGATCCTCACGACGAAGACTCGACTGATGCAGAGATCTCCAAGATCGACTTCACACAGCATCAATATGAGGTCAACATGCGAAATAAGAAGAAGCGGTCGTCTAGCGGTGCTGGCGCGCCGTGCGAGGGGGGCAGCGAACGTGAGCGACCCATGTCGTGGGAGGGAGAGTTGTCTGACTCCGAGATGGTTATAGACACGGTCCACAATGATGAGAACAGCAGTTCAATAGATATGCAATCATCGCGTGACTCAATAGACACCCTTCGTAACGTGACCATCAAAGCTGAACCCCTCAAGACGGAAACCTTCCAAAGCTTCGACGACCAGCGTGTACTAGATTTGAAGTACTCTGCGCCATTACAGCCTCATCAGCGCAGTCTTAGTATGAATAGGATATCAGTACTAACTGAGAGCACATCACTGTGCCTGCCGCGGCGACCGTCGTCCCCTACACACAGCGCCAAGTCCTTGATCCTCGCCGAGCAGACTGCGCTGCCGCTCATCACACCCTCTGTCGAAGCACAGAACCTCACTATAAAGAAGGAGACGCAACTATCAGAATTGAAATGCGAGGGTGGTTGTGGTATGGAGAAGCTGGTGGGGCTCCACGGGTCGCCGCTACTAGGCCGACTGCCGCGCGTCCAGTCAAGCGCCAGCACTGACTCCGCCGTACACTCTATGTACACGCACAGTGTGTACAGCAGTCCATCAGCGAGTCCGCGTCCTGCACGGCACTACACCCCGTCGTTGTCGCGTAACAACAGCGACGCCTCACACTCCTCCTGCTACTCGTATAGCTCCGAGTTCTCACCCACGCATTCACCCGTACAGCAGAGTCGGCAGCCGCACGTGGTGTATCGCGAGCACGAGGACGAGGACGCTGCAGACGACCGCCTGCATCACCACCAGGGCATCAGCAGGCAGCAGCTCATCAACAGCCCGTGTCCAATCTGCGGCGACAAGATCAGCGGTTTCCACTACGGCATCTTCTCGTGCGAGTCGTGCAAGGGTTTCTTCAAGCGCACAGTACAGAACCGCAAGAACTACATGTGCCTGCGCGGCGGCAGCTGCCCCGTCACTGTCGCCACGCGCAAGAAGTGTCCCGCCTGCCGCTTCGACAAGTGCCTCGGCTGCGGCATGAAGCTTGAAGcGATTCGTGAGGACCGAACTCGCGGCGGGCGCTCGACGTACCAGTGCTCGTACTCGCTGTCGGGCGCCGCCTCCACCGGCTCGCTGCTCTCTGCGCACGCGCCGCCCACCTTGCGCCACGCCAGCAGTCTCAACATCGTAAACGGTCCAGGGTCTTACAGCAGTCGAGGAGAAGCCAGTAATAGCAGACTGACTCCAGAAATTCCTACATTATTGCAGGAGATAATGGACGTAGAACACCTGTGGCAGTACAATGAGTCAGAGCTGAGTCGCCTCGGCAAGTCTGGTAgtggggcgggggcgggggcagGAAGTGGAGCGGGGGTGGGGGCCAACCCGTTGCTGGCGGCCAGCGGCATCACGCCGCACACATCCAGCGCTGACTTGCTGGCCGACCTCTGCCACATCGCTGACCACCGCCTCTACAAGATCGTAAAATGGTGCAAGAGTCTGCCGCTCTTTAAGAATATATCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGTTGTTACCGCGGCGTCGCCACGCCCGGCGAGGTGCGCGTCGGCGGCGGACGCGGACTCACGCTGCATCAAAGTGCTAAattcGGCCTAACGCCGTGTATAGAGCGCATGCTGAGCTTCACGGACCACTTGCGGCGGCTGCGGGTCGACCGCTACGAGTACGTCGCGCTCAAAGTCATCGTACTGCTCACTTCAGACGCGCCGGAGTTACGCGAGGCTGAGAAAGTGCGGGCGTCACAAGAGAAAGCTTTAGCTGCGCTGCAGGCGTACACCGCCGCGCACTCGCCAGACGCACCCGCCAAGTTTGGTGAGCTGCTGCTGCGCATCCCCGAGCTGCAGCGCACCTGCCAGTTCTTCATGCAAGTTGGCAAAGAAATGCTGAATCCCGCCAACAAGAGCAAAGATGGCGACGGTCCCAGCTTCAACCTGCTAATGGAACTGCTCAGAGGAGATCACTGA
Protein Sequence: MQGKNKTMSSDGDSVKVEGGHVSVTTISMSGPETSDGQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGAGAPCEGGSERERPMSWEGELSDSEMVIDTVHNDENSSSIDMQSSRDSIDTLRNVTIKAEPLKTETFQSFDDQRVLDLKYSAPLQPHQRSLSMNRISVLTESTSLCLPRRPSSPTHSAKSLILAEQTALPLITPSVEAQNLTIKKETQLSELKCEGGCGMEKLVGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPARHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQQSRQPHVVYREHEDEDAADDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGSCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHAPPTLRHASSLNIVNGPGSYSSRGEASNSRLTPEIPTLLQEIMDVEHLWQYNESELSRLGKSGSGAGAGAGSGAGVGANPLLAASGITPHTSSADLLADLCHIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVATPGEVRVGGGRGLTLHQSAKFGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDAPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00958006;
90% Identity: iTF_01139641;
80% Identity: iTF_01149679;