Pxut005606.1
Basic Information
- Insect
- Papilio xuthus
- Gene Symbol
- dmd-4
- Assembly
- GCA_000836235.1
- Location
- NW:354821-358944[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-25 3.7e-21 74.4 11.2 1 47 8 54 8 54 0.98 2 2 1.2 5.7e+03 -3.0 5.2 2 11 286 295 285 295 0.90
Sequence Information
- Coding Sequence
- ATGATGAACAGCAGCAGAGCGCGGGTACCAAAGTGTGCTCGGTGCAGGAACCACGGCCTCATCTCCAGTCTGCGAGGCCACAAAAAGGCTTGCGCGTATCGCCACTGCCAGTGTCCCAAGTGCGGCCTGATCAAAGAGAGACAGCGGATTATGGCTGCACAGGTAGCTCTGAAGAGACAGCAGGCGGCAGAAGATAAAATAGCCTTGCATCTTGCGTCAGTGGACAGCGGAACAGCGTTGGAGACATTACCACCGGGGCGAATCTACGGCATGCGAGTCACCGGCCCCTGCCCAAGTCCTGGACCTGAGCCAGACTCCGTACATGAAGATCAAACTCCCATTCACATTGACAGCGAGACAAGCGACTCTCTGCCAGACTGCGCGTCTCCTGACTCCGCCGGCAGTGCCCTAACATCTAGACCACGtgtcCAAAATGAAGATACAATTGAAAATGAGGGAACAGTCAGTACGGCGGGTATAGAGATGCTGAGGAAGTTGTTCCCGGGAAAAAAGCGATCTGTATTAGAATTAGTTCTGCGACGTTGCAATCACGACTTGCTCCGGGCTGTTGAGCATTGCAATGCCATTCATGGCCATCAGGAGAAGATCGCATCACCCAGCGCTGGATCCAGTACCAGTTTCGAAACGTCAGTATCAAGTTCGGAGGAAGTTGAATCTAGATGGTCCGCGTTCCGTCCCGTCGGTCCCCGGGCACCTTTACTGCCAGCTCTAGTGATGGGTCGAGTATGCGGTTCCGATTGGTTGGTGCCGTTACCAGCGTTGCCAGCTCTTAGCACTCCGCTATTGTTTCCTTTACAGCATCCTCATGGACCGCAAGCTCCGTGTAACCCATGCTCTCCTGATTGTAGACAATGCAATCGACATTAA
- Protein Sequence
- MMNSSRARVPKCARCRNHGLISSLRGHKKACAYRHCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVDSGTALETLPPGRIYGMRVTGPCPSPGPEPDSVHEDQTPIHIDSETSDSLPDCASPDSAGSALTSRPRVQNEDTIENEGTVSTAGIEMLRKLFPGKKRSVLELVLRRCNHDLLRAVEHCNAIHGHQEKIASPSAGSSTSFETSVSSSEEVESRWSAFRPVGPRAPLLPALVMGRVCGSDWLVPLPALPALSTPLLFPLQHPHGPQAPCNPCSPDCRQCNRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01503021;
- 90% Identity
- iTF_01140965; iTF_01147416; iTF_01148857; iTF_01143868; iTF_01145308; iTF_01144576; iTF_01140239; iTF_01142432; iTF_01139632; iTF_01143132; iTF_01141717;
- 80% Identity
- -