Basic Information

Insect: Papilio protenor
Gene Symbol: RREB1
Assembly: GCA_029286645.1
Location: JAGSMZ010000016.1:2845444-2850268[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.031 2.7 9.1 0.3 1 23 53 76 53 76 0.96

2 12 6.6 5.7e+02 1.8 1.3 2 22 119 139 118 139 0.90

3 12 0.018 1.5 9.9 0.1 1 23 266 288 266 288 0.97

4 12 0.00095 0.083 13.9 0.4 1 23 297 319 297 319 0.99

5 12 0.00059 0.051 14.5 2.0 1 23 325 348 325 348 0.97

6 12 0.0024 0.21 12.6 1.6 1 23 698 721 698 721 0.96

7 12 0.0002 0.017 16.0 1.3 2 23 914 935 913 935 0.97

8 12 0.02 1.8 9.7 5.3 1 23 941 964 941 964 0.97

9 12 0.2 17 6.6 1.3 1 23 995 1019 995 1019 0.91

10 12 0.095 8.3 7.6 0.1 1 23 1043 1066 1043 1066 0.91

11 12 0.018 1.6 9.9 0.3 2 23 1106 1127 1105 1127 0.92

12 12 0.023 2 9.6 5.3 1 23 1133 1155 1133 1155 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.031	2.7	9.1	0.3	1	23	53	76	53	76	0.96
2	12	6.6	5.7e+02	1.8	1.3	2	22	119	139	118	139	0.90
3	12	0.018	1.5	9.9	0.1	1	23	266	288	266	288	0.97
4	12	0.00095	0.083	13.9	0.4	1	23	297	319	297	319	0.99
5	12	0.00059	0.051	14.5	2.0	1	23	325	348	325	348	0.97
6	12	0.0024	0.21	12.6	1.6	1	23	698	721	698	721	0.96
7	12	0.0002	0.017	16.0	1.3	2	23	914	935	913	935	0.97
8	12	0.02	1.8	9.7	5.3	1	23	941	964	941	964	0.97
9	12	0.2	17	6.6	1.3	1	23	995	1019	995	1019	0.91
10	12	0.095	8.3	7.6	0.1	1	23	1043	1066	1043	1066	0.91
11	12	0.018	1.6	9.9	0.3	2	23	1106	1127	1105	1127	0.92
12	12	0.023	2	9.6	5.3	1	23	1133	1155	1133	1155	0.97

Sequence Information

Coding Sequence: ATGAAGTTGGAGAGCGAACCGCGCGCGACACGCACCACCAGCATTGACAGCGACAACAGATCTGATCGCAGCGAAGAAGAAGATTCTAGAAGGTGCAGGAAGAGAGCAGCGTCCACATCCCCATCGCCAATACCCTTAGATAAAAGAACAACGCGGTACGAGTGCCCAAAGTGTCTACAGCGGTTTGACTCCGCCAACGCTTTCGATATACATCGTTTCACAGCTCACGGTGATGAAGTTAAAACAGGCTATGATGGTATGACTTTAGTTGACTTCTCAAACAAGAAATTCCCGGAAATATCACGAGGAATGTGCGACCGTAACACTCATATACCCATGCATGAGCAACGCAACAAATGCGACTTGTGCTCGCGGGAGTTCCCATGTAGCCAGTCTTTGGACATTCATAGAAAAACTTGTATCAATTCAACCAGACTTACTAGTCCAGAACGTGAGCGTAGAGATTTCTTCGCCAATTTAGACCTAAGGAATAGATCTTTTGGTATTCCTGGCACCTTAACACCGCCCATGGAAAGATTTACTTCAAAGTTCGAAGACGGTCATATTGTTGGAAACGGTATAAGGCATATAGATGCTGCCAGAGACTTGGCGGATATTCAGTCGATCTTAAATGTGACGTCTGCCGGGAGTCTCCTAGAAAGGCTGACTGGAACTAGAGTTGCTTTAGAAAGCGCTGCCCTCACCCCACCTGATACAATAGTGAAGGAACGCGAACAAGAAGAAACTCAAGATAATTTTGCAGCTGAATTCAGAAGAATGAAACTTCGTGGCGAATTCCCATGCAGATTATGTCCAGCGAAGTTTCCCAATCTTCGAGCACTTAAAGGACATAACAGAGTACATCTCAGCGGAACTGGTCCCGGGCCTTACCAGTGCAACATGTGTCCTCATGCATCTTTAGACAAGGCTGCTTTGGTTCGTCACATGAGGACTCATAATGGCGATCGTCCTTACGAATGTGCAGTGTGCAATTATGCGTTTACTACTAAAGCTAATTGTGAGCGCCACTTACGTAATCGCCACGCCAAAGTTACCAGGGAAGACGTCAAGCGCTCTATTATTTACCATCCATCTGAGGATCCAAACAACGATGAAGTGAATTCGAAGTTGGCTCGAGATGAAGTCAAAAGGTCTCTCGCTTTTCATACTCCTGAAATTGAGCGGCGCAACGAATCAACTGGTCGCGATACGCCGTTAACTCACTATACGCCAACATTTATAACAGACAGACATCCAGTTACCGCTTTAACTACCAAAACGCTGCCCGAAACGCCAACATTGACTCCCAAGGAACCAGAACAGTCTCTTCCTAGAATCAAAGTGAAAGGAATCGGACAGTTGACACAAATCCCGGAATTCAGACCACCCGAGATGACATTTATTTCTAACGACACTCCGCCTGAACCTTACGATGATGATGCTCCTGTCGATCTCAGCACAAGCGATAATAACAGCTGCGATGTTCTGGATCTCAGTAAAAAGAAACGCGAAGTGGATGATGAACCTAAAGCGGTCCCACGAAATGCTTTTGAGACAAACCCGTCCACAACCGCAGCATCAGTAGCTGCTACGGCATTGGAAAAGACGAGATTCCTCTTAGCCCAGCAAAGACTTTTCGAGTCTTCTCTACCAAAGATTGACCCATATTATGCGAATCAGTTTTCCCAGCTATACGCCGGCGCTGTCTCCGGCCTACCTGGCTTGACAATCCCACCTTCAGCTTTTCCTATCAATCCTTACTTTCTTCAGACATCGTTTTTTCCTCACCCAACTGATTCACAAGAACTTGCCGAAATAAAACAGCGCATACAAAAGGAAATTATTCGTGGGCTGAGTATGTCGGGGGGACGATTGGTTACCGAACCTGAGACTCAGCCGAAGCAAGAGCCTGAAGAGGAAGACCTGAAACCGCTCTCTCAAGCTACCTCCCCCACCCCACCACCTCGTCCCGAATCTCCGCGCCCTTTAAGCAACAATGTTGTACCTCAAAGCGATTCCGTCAAGATGGTTATTAAGAACGGTATACTGATGCCAAAGCAGAAGCAAAGACGTTATCGCACCGAAAGGCCATTCTCGTGTTCGCAATGTTCAGCTCGGTTCACTTTACGTTCAAACATGGAACGTCACGTGAAACAACAACATCCCCAGCATTGGAGCGTACGTAGACCAACGCCAAGAGCCCCGCCGCCGTATCCAACACCAGATAACATAGCTGACAGAGTGAAATTCGCTCTTTTAGCGAGACATTTAGAAAGGCCGCTGCAACAAAACGATCGGTCTCCTATTCGCAGAGACTCTGACGAGGTGGCTGATAATGAGGAGGACGAAGATGACACTTTAATCATTGATGAAGAACCAGAAATTGATATCAAACCTCTAGATCACACAGCCGCACATAAAGCAGCGGCAGAAATACTTATGGCTACCCGTCAACAAGAAATGGCTAAAGATTTCGATCTTAAAATAGCAGGAAATCTAATTAACAAACCGATCCCAATCGCTACTGATAAATCTGAAACTGGGACAGACCCTATACCAGACACGGAAACTATTCCTGTTGTTCCCACTCGTAGCGATGAGGAGGAAGACGAAGAAGGCCTGGTTGCATCAACTAGCGAAGGCAATAATTCTGGAAGCGACGAAAACAAaTCGGAATCAGACACCGGAACTCTTCCTCCTAAGAAGAAGTCGGCATATAGTCTAGCTCCAAACCGAGTGTCATGTCCGTACTGCCACCGCAAGTTCCCCTGGTCGTCGTCCCTCCGTCGCCACGTGCTAACCCACACGGGACAGAAACCCTTCAAATGCCCTCACTGTCCTTTACTCTTCACCACGAAGTCAAACTGCGATCGTCATTTACTTCGAAAACATGGCGGATCTGCTAGAGCTATACTCGCTGAACCAATCACAGACTCGATCTCCCCTCCACAGATTGATACCAGAACAGTCCCAGAAAGACCGTTTAAATGCGCGTCATGTCCATCCAGTACCTTCTCCTCTATGGAAACTTTAAAGAAACACATGTCATCACGTCACGGAACTAGCGATTCCCAACCGGGTTCTCCTAATCCAGATGGGAACGAGGAATTAGTGGACGGTATGGTGTTCAAGTGTCATTTATGTGAAGGATCCTTTGGAGATAGAAGTGCTGCTTTGGCGCATTTAGCAGCGAATCATGCAGCGGAATATGAACAGTTGGTTAGCAAAGGAGCGCTAGATGGCACCAGTGACCGTAGCGAAAGCGCTGATGATGACGAAAGGGGCAAATTTCCTGATCACGCTAATAGAAAGGTTGTGTGTGCGTTTTGCATCCGTCGTTTCTGGTCGGCTGAGGATTTGCGTCGTCACATGCGTACGCACTCCGGCGAGCGGCCATTCGCATGCGACTTGTGTCGGCGGCGGTTCACATTAAAGCACAGCATGCTTAGACATCGCAAGAAGCACCGAGAAGAACTCACTGATGATGAGGAGACCACGCCTCCTAACACACCATTGGAAACCGCTAATACTAATGGATATCGCTACCAAGACGACGAAGGTTCAGGCGGGGAAGTGCCCAGTAACGTGAACAACAACAACTCACCGCCATCTATCCCCTACGACAAGAAACTCAAACTTCAAATGACGTCACGCAAGTACTCATCCGACGCGGAGAACGATCCAGAAAATGGCGGCGATCTGATCGGCAAACTGCTCGGGATACAGGACAAGACTATTATCAACAAACTTCTCTCATCAGCGGATGAAGCGGCCAAATTTCTTGGAGTTAATAAATGA
Protein Sequence: MKLESEPRATRTTSIDSDNRSDRSEEEDSRRCRKRAASTSPSPIPLDKRTTRYECPKCLQRFDSANAFDIHRFTAHGDEVKTGYDGMTLVDFSNKKFPEISRGMCDRNTHIPMHEQRNKCDLCSREFPCSQSLDIHRKTCINSTRLTSPERERRDFFANLDLRNRSFGIPGTLTPPMERFTSKFEDGHIVGNGIRHIDAARDLADIQSILNVTSAGSLLERLTGTRVALESAALTPPDTIVKEREQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLAFHTPEIERRNESTGRDTPLTHYTPTFITDRHPVTALTTKTLPETPTLTPKEPEQSLPRIKVKGIGQLTQIPEFRPPEMTFISNDTPPEPYDDDAPVDLSTSDNNSCDVLDLSKKKREVDDEPKAVPRNAFETNPSTTAASVAATALEKTRFLLAQQRLFESSLPKIDPYYANQFSQLYAGAVSGLPGLTIPPSAFPINPYFLQTSFFPHPTDSQELAEIKQRIQKEIIRGLSMSGGRLVTEPETQPKQEPEEEDLKPLSQATSPTPPPRPESPRPLSNNVVPQSDSVKMVIKNGILMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPTPRAPPPYPTPDNIADRVKFALLARHLERPLQQNDRSPIRRDSDEVADNEEDEDDTLIIDEEPEIDIKPLDHTAAHKAAAEILMATRQQEMAKDFDLKIAGNLINKPIPIATDKSETGTDPIPDTETIPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDTGTLPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPITDSISPPQIDTRTVPERPFKCASCPSSTFSSMETLKKHMSSRHGTSDSQPGSPNPDGNEELVDGMVFKCHLCEGSFGDRSAALAHLAANHAAEYEQLVSKGALDGTSDRSESADDDERGKFPDHANRKVVCAFCIRRFWSAEDLRRHMRTHSGERPFACDLCRRRFTLKHSMLRHRKKHREELTDDEETTPPNTPLETANTNGYRYQDDEGSGGEVPSNVNNNNSPPSIPYDKKLKLQMTSRKYSSDAENDPENGGDLIGKLLGIQDKTIINKLLSSADEAAKFLGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00961349;
90% Identity: iTF_01147666;
80% Identity: -