Ppro000154.1
Basic Information
- Insect
- Papilio protenor
- Gene Symbol
- sip1
- Assembly
- GCA_029286645.1
- Location
- JAGSMZ010000001.1:1549869-1560281[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.21 2.8e+03 -1.8 0.0 4 27 368 391 365 395 0.85 2 2 1.5e-33 2e-29 103.6 0.1 120 275 431 582 421 582 0.96
Sequence Information
- Coding Sequence
- ATGTCTGACGATGAGGTGATACGTTTCGAGATAACAGATTACGATCTAGACAATGAATTTAATCCAAACAGGCagagaaaaactaaaaaagaaCATCAGATTTATGGTGTTTGGGCAAAGGACAGTGATGAAGAAGATAATGAAGACAATATCAGGCAAAGGACTCGCAAACAAAAAGACTTTACAGCACCAATTGGGTTTGTGGCTGGCGGGGTACAGCAAGCGGGAAAAAAGAAAGTTCCAAATAAAGaAATTGAACCAAAGGAAGCTTCAACATCCAGACCTACGATAGTAGATAGTTCTGATGAAGAAGTGAATGATGAACCATTACCTACTGAAACTGCTGGTATTCGAAGACATGGTCAAGGTCTGAAGCCAGCCAACCTCGGTGGCAGTGTCGGAGCATGGGAGAAACATACTAAAGGCATTGgtgcaaaattattattacagATGGGTTATCAACCAGGTAAAGGTCTTGGTAAAGCACTACAAGGTATATCTGCACCAGTGGAAGCCACTGTGAGGAAAGGCAGAGGTGCTATTGGTGCTTATGGACCTGAAAAAGCAGCTCAAAAAGCCAAAAAGGAAGAGGAGAAGCGTCTCAAGGATAAGGAAGACCAAGAGAAGGGGACCACGGATAAGAATTACAACTGGAAGAAGTCGCACAAGGGACGTTACTTCTATCGAGATGCAGCGGATGTCATACAAGAGGGTAAACCCACGATGCATACTATTGGCAGTAGTTCGTTGGCGCGCGTGCCAGTGATAGACATGACTGGAAAGCAGAAGCGAGTACTGTCCGGGTACCACGCGCTGgcggccgccgcgccgcgctaCGAGCACGAGCCGCGCCGACAGCTCAGACACTTCTCAGCGCCACAACTCACACATAACTTGCAGCTAGTCGTTGATAGTTGTGAACAGGACATTATCCAAAACGCCCGTGAACTTCAGGCGGCAGAAGATGAAATTGTAGTTCTAGAACGAGACTTAGAAGAATGCAACATAAAGCTGCAAGAACAGGATGTAGTGATAGACAAAGTGCAAGCCATCACACAGAGGATAGAAGAGTTGAACAAACCTGATCTATCACTGGAAAAGTCCTATGAAGTTCTAGAAGATTTGATGGAATCGTATCCGTTGGAGTATGAGATGTTCGGTCTGGGCACGATCGGGGGCACGATACCTGCTCTGGCAACATTTTATACCTCGGATCACGTCTGCAGCAGAGTCGTGGAACCCGCGGCGGGGGGGTGCGATGGTGCTGGTGTTCGAGCGCTGGGCGGCGGCGTGCCGCGGTGGCTGCTGCAGCAgtgcgcggcgcgcgcggtgGTGCCGCGCCTGCTGGCCGCCGTGCGCGCCTGGGACCCCACCCGCGACACGCAGCCGCTGCACCACTGGGTGCTGCCCTGGCACCAGCTCGCCGGTAATGAGTTAAGCATCAGCACGTACCCGCTGATCCGGTCGCGGCTGGCGGGCGCGCTGGCGGCCTGGCACCCGGCCGACGGCTCCGCGCGCGAGCTGCTGAGCGCGTGGCGCGGCGCGTGgggcgcggcgctgcgccCGCTGCTGCAGCTGCACGTGCTGCCCAAGCTGGAGCACTGCCTGCTGCACGCGCCGGTCGACCTCGTCGGCAGGGAGAACAACGCGTGGTCGTGGTGCGTGCAGTGGACGGAggtggcgggcgcggcggaggtggcggcgctggcggcgcgcgcgctgctgccGCGCTGGCtggccgcgctcgccgcctGGCTCAACACCGCGCCGCCGCACGCCACCGTGCTCAACTCTTACACCAACTTCAAGAAAACATTCCCCGAGGAAGTTTTAAAAGAGCCACCTGTCCGTGAGGCTTTCCGTAAAGCGTTAGACATGATGAACAGGAGCACGGACATCGACAGTGTAGAGCCTCCCCCTCCCCCGCGCTTCACCCTTCCAGATAATAAAGAAGGCTCCAAAATCAATGAGATATTAGCCGTTACTAACCCTCATAAGAGTTTCTCAGAACTATTGGAGACCAGATGTATAGAAAAAGGGATAACTTTCGTACCTATTCCGGGGAAAACCAGAGAAGGGAGACCTCTATATAAGATAGGAATGCTACAGTGTTATGTAATTAGAAATGTTATTATGTATTCAGAAGACGGAGGCAGAAATTTCTTACCGATCGGTATGGATCGGTTATTAAATATGGTTGAAGAATAA
- Protein Sequence
- MSDDEVIRFEITDYDLDNEFNPNRQRKTKKEHQIYGVWAKDSDEEDNEDNIRQRTRKQKDFTAPIGFVAGGVQQAGKKKVPNKEIEPKEASTSRPTIVDSSDEEVNDEPLPTETAGIRRHGQGLKPANLGGSVGAWEKHTKGIGAKLLLQMGYQPGKGLGKALQGISAPVEATVRKGRGAIGAYGPEKAAQKAKKEEEKRLKDKEDQEKGTTDKNYNWKKSHKGRYFYRDAADVIQEGKPTMHTIGSSSLARVPVIDMTGKQKRVLSGYHALAAAAPRYEHEPRRQLRHFSAPQLTHNLQLVVDSCEQDIIQNARELQAAEDEIVVLERDLEECNIKLQEQDVVIDKVQAITQRIEELNKPDLSLEKSYEVLEDLMESYPLEYEMFGLGTIGGTIPALATFYTSDHVCSRVVEPAAGGCDGAGVRALGGGVPRWLLQQCAARAVVPRLLAAVRAWDPTRDTQPLHHWVLPWHQLAGNELSISTYPLIRSRLAGALAAWHPADGSARELLSAWRGAWGAALRPLLQLHVLPKLEHCLLHAPVDLVGRENNAWSWCVQWTEVAGAAEVAALAARALLPRWLAALAAWLNTAPPHATVLNSYTNFKKTFPEEVLKEPPVREAFRKALDMMNRSTDIDSVEPPPPPRFTLPDNKEGSKINEILAVTNPHKSFSELLETRCIEKGITFVPIPGKTREGRPLYKIGMLQCYVIRNVIMYSEDGGRNFLPIGMDRLLNMVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00957964;
- 90% Identity
- -
- 80% Identity
- -