Ppol013050.1
Basic Information
- Insect
- Papilio polyxenes
- Gene Symbol
- JARID2
- Assembly
- GCA_026167825.1
- Location
- JAOPJD010000025.1:5368364-5380688[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-19 7e-16 58.9 0.0 7 89 805 884 800 884 0.91 2 2 2.2 2.9e+03 -0.8 0.1 58 85 968 993 955 995 0.73
Sequence Information
- Coding Sequence
- ATGTCTGTTCCGGAGCCACCCGAGGGAAAAACTCTGTTGCAATCTTTTATAAACAACTTTAATCAACAAAATGAAGCAGGAGTTGCTGCTATGCCAGGTACTAGTAATGCGGTTGAGGAAGTTGCAGATTCAGGCATTGCTTACTTTGTGGATGAAGAAGGACGCTACTACTATCAGCCAGCTGATGATGACCAGAATATAGTATCTTTACCAATGGTTACTGATGAGATTGCAGAGGCTATACAAGAGGATGAAGATGAGGATGAAGAAGATGAAGAAGAACCTGCAATCTTATCAGACTTTAAAGAGTACCAGACAGTAACATTGATGCCCTCGGAAAACAGCTCTGGTGGAGTGAGCTATGTGCTTGTTGTACAGGAAGACCCAAAACAAGTTGTTAACATCAATATTCAGGGTGAAAAGAATAATGAAGATGTATATAACTTTGAAGAAGAAGATGAAGAGGCTGGTCAAGAGGGCACTGATGATGATAATGACAAAAGTAATGTGACGACAAGAGGAAAGCACTCGAAATATGTACGCCCGCGGTTCACATATGGACTTACGAGACGGTCAATAGTTCACACTCGGTCACATAGGAGGACTTCAATTAGTAGCCGTGAATTTGAGGAAATTCCTCTGGGACCTAGTCGGCGACATCGCAGTCGATCCATGCTAAAAACAGATAGAGTGAAAAGACAGCGCTTGCGCTCCCGCCCGAGTCGACGGTCGGTGGCTGATGCCTGCCAATCAGACCATGGAGAGCTGCAGGGTAATGACGAATCGGCCTGTAGTGGCTCACCACAGAAAATAGTTTTAGATGAAACAAAAAAGAATGGTTTACAAACTCAGCGGCGTACTTCCCATTCTGTCGATGATGCTTCTGTATCAAGACAGGAAGAAGCAAAAAATGGACAACCACTTAGTGATAGCTTACTGCAAAATACAGATAACAAGATCAAGAATCCTGTTGATAAGGAAAAACCTCAGAAAATATGTAGCCAACCTTCAACATCCAGCAGTAAATTAACCACAACTAAAGACTCTCCCATAGCTGACATCAACACCACATCAAAGTCGTCAACATCTCTGCGTCTTCCTAAAAAAAGACCATCCAATTCCACACTAGAATCCTTAATACAATCTGCTTTAGGAATCCAGCCAATTGTCAAAATTGAATCTCCAGCTCCTTCCAGTCTTCTAGTTACTAAATTATCATCTAAACAATCTCAAGTCAAGTCTGTATTCACAAGTGAGGGACAACGGCCAAAATCTGAAAATTCTGATGCCAATATCATACCAATAACTAGTTCTGATGTTACATCAAATTGTGCTGAACATAAAACAGTTTCAACTTCTCAAGATGATAACAATATTAAACGGCCAACGGCTGAGAAATATTTAACAGCACCATTAATTTCTAGAAGGTTACGCAACATTCCTATCGATAAAATAACTAAAACAAATCAGGAGAAAAGAAATATTACAAAAAAGCAAATATCTAACACGGGAGAGCAATCTGAAGCTATCGATATATCTTCCAAAATCAATAACCGTCGTATATATTGTCCATCTAAAAACTACTCAAGTATGAATGATGTTGTCTATGCAGACCCTAAAGATTTGGTGAGCCGATGTGAACGATGCGATTATTGTGCATTCGTCGACAAAGTACAGTGTGTATCAAATATGTTTAAAATACAATACTGTCGAAAGATTATACAATCAAAAATATACGGATTTGATGCTGAAGATGAGGAAACAATGAAAAATGATTCCAATATACCAAGAGCAAAGACGCGTCATGGGAACGAGAAAAGTACTGAATTTGATACACAAACATGTTATTTAATTTATGATAAAGATTCTGATCATGTTGTAGAAGTAAAAAGAACTCGGTATCCTAACCAGGTGACACGAATTGAAAGTGCTAATATTATCCCCAAGACATTGAATACTAAGATCATTACAGTTACTGCATTTGATAGTGATCAACTTTTAGATGATATCATAAATTTTGTTATATCAAAGAAGTCTAATACAACAGTGGAAACTCCCTCTGATTCCGTTAATGGAACTAAGCATGGATCAGTCCAAAAGAACTCAAGTGCTTTTAACATAAACGGAGATCATAATGGTACTGAGGAAAAGAATTCAGCTGTACTTAAGCCAATGCTCAAAGCGAGTCAAACAGATGCACCAATCTTCCATCCTACAGAACAAGAATTCATGGACCCCATTGCTTACTTCAATAAAATTATGCCAATCGCTGCGAAATTCGGTTTATGTAAAGTTGTCGCTCCGAATACTTTTAAACCAAAATGTATGTTAGATGATGAAGTTCGCTTTGAAGTTACGAACCAATATATATCTCGCCTGTACAAGCGATGGGGACCGGCCTCGAGAGAACTGTGTGCCATTAAAGCTTATTTGGCTTCCCAAAGTGTGATCTTCAGTCGGCCTCCTTTGCTCGAGGGGGTCGAGGTCAATTTACCGAAGTTATATTATTTGGTACAAACTCTGGGCGGCCTAAAAGAAGTAATCGAAAAGAAGCGCTGGACTAAAGTAGCTGAAGAAATGAACCTTTCCAAAACGCCAAAAATCGAAGTGAAATTGGATCAAATATATGTCAAATATATATTGCCTTACGACACGATGACAGATGATGAGCGGAAAGATCTAATGAAAGCAGTTGACAAACACTGGAGTAAGAAACACCGAAAAATGCTACAACGTGCTATGAAGCCATTACATAGACAGAAACGTCTTCTAGAGGAATCTGAATCATCTGAAGAAGATATCGATGAAGATATTTATGTATCCGGAGCACTGGCCGAAGCAGAGGACTGTATCAGCAATGGCAGGCAAATGAATCTGCTTACTTTTAAAAAGGTGGCAAGTAAATGTAAGGAAATGTACATTCCAAATAGTAATCAAAATACTCAGACTGATATAGAACAAATATATTGGAAAATGGTTCTTCTTGCGCAAGATCACATTTGTGTGAATAACGCATCAATCGACACCGGCGAGGAGGGATATGGTTTCACTAAAGACCAACGTGATACTTATGGGAAACATCCATGGAATTTAAAGGTTCTTAGTCAGAATAGTGGGAATGTCCTTAGATTCTTAGGACCAGTACTGGGAGTGACAGTTCCCACTTTGCATCTTGGGATGGTCTTCTCAACCAGCTGTTGGCATAGAGATCCCCACGGTCTTCCCTGGATTGAATACATGCACACCGGGCCCGGCAAAATTTGGTATGGCATTCCTGATGAACAAAGTGACAATTTCCGGAGAGCAGTAGAACTTCTGTGCCCGACATCATGTCAAAACAAATCAATTTGGCTTCCGTCCGATATCACAATGATCCCACCGGACCTGCTCTTGCAGAATAATGTATCTATGTCTAGAGTAGTTCAAGAGCCGGGTCAGTTTATTGTGGTTTTTCCAAAGGCATATTCTTGTTCTATTGCAACTGGATACACTGAATCTGAGAGTGTATATTTTGCAACAAATTCATGGTTGGAAACAATAGATCAAGTGTTTCAAGAAGTACGCGAAAGCTGCGAACCTACAATGTTCTCGCTGGAACATTTGCTGGTGTCTGCTGCGCGGGACTCGCGTGCGTCCACTGAGGTCCTCAAACTGGTCAATGTTCTACTCGGGAAAATCATAAGGGAAGAGCTGAGTAACCGCACCGCCCTCGCCGCATACAAAATTCAGAACCAAAACCCACAACAAAATAAGCATTCTCGCAAGCGGCCCGCAGGCGCGTGGAATGTTCGAGATCAAGACGAGTGTGAGATCTGTCAAGCGACCTTGTACCTCTCCAAAGTGAGAGGATTGACAGACAAGAAGCGGTCGGTGTGCCTCCAGCACGCCCTGCAGTTACTCGCTGTAAAGAACAGGGAATGTGACTTGACCAGCGTTGAGCTTGAATTATTCTTTTCTGATGCAGAATTAGAAAGAATTATGACAAAAATTAAAACTCGTATTTAA
- Protein Sequence
- MSVPEPPEGKTLLQSFINNFNQQNEAGVAAMPGTSNAVEEVADSGIAYFVDEEGRYYYQPADDDQNIVSLPMVTDEIAEAIQEDEDEDEEDEEEPAILSDFKEYQTVTLMPSENSSGGVSYVLVVQEDPKQVVNINIQGEKNNEDVYNFEEEDEEAGQEGTDDDNDKSNVTTRGKHSKYVRPRFTYGLTRRSIVHTRSHRRTSISSREFEEIPLGPSRRHRSRSMLKTDRVKRQRLRSRPSRRSVADACQSDHGELQGNDESACSGSPQKIVLDETKKNGLQTQRRTSHSVDDASVSRQEEAKNGQPLSDSLLQNTDNKIKNPVDKEKPQKICSQPSTSSSKLTTTKDSPIADINTTSKSSTSLRLPKKRPSNSTLESLIQSALGIQPIVKIESPAPSSLLVTKLSSKQSQVKSVFTSEGQRPKSENSDANIIPITSSDVTSNCAEHKTVSTSQDDNNIKRPTAEKYLTAPLISRRLRNIPIDKITKTNQEKRNITKKQISNTGEQSEAIDISSKINNRRIYCPSKNYSSMNDVVYADPKDLVSRCERCDYCAFVDKVQCVSNMFKIQYCRKIIQSKIYGFDAEDEETMKNDSNIPRAKTRHGNEKSTEFDTQTCYLIYDKDSDHVVEVKRTRYPNQVTRIESANIIPKTLNTKIITVTAFDSDQLLDDIINFVISKKSNTTVETPSDSVNGTKHGSVQKNSSAFNINGDHNGTEEKNSAVLKPMLKASQTDAPIFHPTEQEFMDPIAYFNKIMPIAAKFGLCKVVAPNTFKPKCMLDDEVRFEVTNQYISRLYKRWGPASRELCAIKAYLASQSVIFSRPPLLEGVEVNLPKLYYLVQTLGGLKEVIEKKRWTKVAEEMNLSKTPKIEVKLDQIYVKYILPYDTMTDDERKDLMKAVDKHWSKKHRKMLQRAMKPLHRQKRLLEESESSEEDIDEDIYVSGALAEAEDCISNGRQMNLLTFKKVASKCKEMYIPNSNQNTQTDIEQIYWKMVLLAQDHICVNNASIDTGEEGYGFTKDQRDTYGKHPWNLKVLSQNSGNVLRFLGPVLGVTVPTLHLGMVFSTSCWHRDPHGLPWIEYMHTGPGKIWYGIPDEQSDNFRRAVELLCPTSCQNKSIWLPSDITMIPPDLLLQNNVSMSRVVQEPGQFIVVFPKAYSCSIATGYTESESVYFATNSWLETIDQVFQEVRESCEPTMFSLEHLLVSAARDSRASTEVLKLVNVLLGKIIREELSNRTALAAYKIQNQNPQQNKHSRKRPAGAWNVRDQDECEICQATLYLSKVRGLTDKKRSVCLQHALQLLAVKNRECDLTSVELELFFSDAELERIMTKIKTRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01144343;
- 90% Identity
- -
- 80% Identity
- -