Ppol011232.2
Basic Information
- Insect
- Papilio polyxenes
- Gene Symbol
- dl
- Assembly
- GCA_026167825.1
- Location
- JAOPJD010000030.1:8890168-8896451[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-20 3.3e-16 60.2 0.0 1 64 41 104 41 106 0.94 2 2 9.7e-30 3.5e-26 92.7 0.1 48 169 106 236 104 236 0.93
Sequence Information
- Coding Sequence
- ATGGCTAACCATCTACCTATACCGCGGCGCGCCGTCGCCCAGAAGACGCACGAGCCGAAGGGGAGATCAAAGAAACCTTCCAAGACGCACGAGCCGAAGGGGAGATCAAAGAAACCTTCCGTACGGGTCGTCGTACAGCCTGTAGACTCTCACAGGTTCCGTTATAAGTCGGAAGGTCGGTGGGCCGGTTCAATTCCTGGGGTAAACAAGAAGGGTAATAGGGAGGGCTTCCCGACCATAGAGATCATCGGTTGCCCCGAGGGTAAGGCCGTCATTGTGGTTTCCTGCGTCACAAAGGACTCGCCCTACAAGTTAGGTAAGGCCGTCATTGTGGTTTCCTGCGTCACAAAGGACTCGCCCTACAAGACACACCCGCACGGAGTGGTAGCGCGAGAGTTGTTCATGTCCGAAGAAGAAGTAAAAAAAGGCGCGTGTAAGGTGGTGGTGGAACTGACCGGCGAAAGTACTAAGGTCTCCTTCACCAACATCGGCATCCACAGCTGCAAACACAATGAAGTTAAGGAAGTCCTCGAGACGCGGCGCCGCCTTGGCGTCGACCCATTTGGCAGCGGTTTCGACTACGGCCGCGAACCGAAGAGGATCGACCTGAACGCTTTGCGGCTTTGCTTCCAAGTGTTCGTAATGGACGAGAAGGACGGCATTCGTCTAAGACTGCCGCCCGTTGTCACCAGCGTCATCCACGACAAAAAAACGCAAGGCGAGCTGCATATCACGCGCCTCTCACACTGCACCGGCCCCGCAACCGGCGGCACCACTGTTATACTCCTCTGCAAGAAGGTGAAGCCGTCTGATACGACGGTGGTGTTCGTGGAGCGGGGTGCGGGCGGGGGTGCAGTTTGGGAGGCGGCAGCCTCAGACGTCAGCGCGCACCAGCACGTCGCCTTCTGCTTCACTACGCCGCCTTACCGTCACACAGACATTACGCAGAGAGTCACGGTGTGCGTGCAACTTAAAAGGCTGTCAGACAACGCCCGCAGCGAGCCAGTGGAGTTTGTGTACACGCCGGCGCGCAGAGATACAAAGGAATACATTCAGAAGAAACCGTTGTTGACATGGCTTCAGGATGAAAACTCACCGATGGAATCAGACATGTCTCGTGAACAAGTTAGCTATAACTCTGCACAAAGTCCATTGGAACAGGAACCTTTGCCCGCGGAGCCAAAGCTTTTACAGCCGTGGCCGACGGACCTGCCGCCAATGCTCGGTCCTAGCCCCCAACACCAGTACCAAGTTCAAGACGTGTCCTGGATGGACAAGAGCTACGTCCAGCTCGACCAATTACCGCCTTCTCCCAGCCTGCAGGATGATTGGTGA
- Protein Sequence
- MANHLPIPRRAVAQKTHEPKGRSKKPSKTHEPKGRSKKPSVRVVVQPVDSHRFRYKSEGRWAGSIPGVNKKGNREGFPTIEIIGCPEGKAVIVVSCVTKDSPYKLGKAVIVVSCVTKDSPYKTHPHGVVARELFMSEEEVKKGACKVVVELTGESTKVSFTNIGIHSCKHNEVKEVLETRRRLGVDPFGSGFDYGREPKRIDLNALRLCFQVFVMDEKDGIRLRLPPVVTSVIHDKKTQGELHITRLSHCTGPATGGTTVILLCKKVKPSDTTVVFVERGAGGGAVWEAAASDVSAHQHVAFCFTTPPYRHTDITQRVTVCVQLKRLSDNARSEPVEFVYTPARRDTKEYIQKKPLLTWLQDENSPMESDMSREQVSYNSAQSPLEQEPLPAEPKLLQPWPTDLPPMLGPSPQHQYQVQDVSWMDKSYVQLDQLPPSPSLQDDW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01144329;
- 90% Identity
- iTF_01144329;
- 80% Identity
- -