Basic Information

Gene Symbol
pnr
Assembly
GCA_018231625.1
Location
DVQH01005785.1:3830-6875[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2e-16 6.5e-13 49.5 3.3 1 35 463 496 463 497 0.97
2 2 1.4e-17 4.7e-14 53.2 7.5 1 35 524 557 524 558 0.97

Sequence Information

Coding Sequence
ATGGAGAATTCAACGTCACTGGGACGCTCCGGCGAAGAGCAACGCGACAACGATACCACGAGAGGTGTAATGAGTGGTGCGGGCGAGGCCGGCACCGGCGAAGAAGCGCTGCAGCTCGTCAAGAGCGAGGAGCGCACGGGTGGCACGGGGGGCGGGCAGGAGGGCGCATCTGGCGGAGATGTCGCCGGGGCCGGAGTAGGGGGCGGAGGCGAGCCACACTCCGTTATCACTTCGCGTCGCGCTATGCGAACCATCACCACGGCGGGGCATATCGCCGACGCCGCTGACCTCCCACCCGATGACAGCGTCAAGGACGAGCCGTCCGAGACATCACTCGACTCTGAGCACATGCAGTATGCGGCCAAAATGGAGGAAAGCGCCGAGACGAGGGCCGCGCACCATGCTTACGACGAGGAGCGGCTACGCTTAGCCGAGGCGGAGACGGCGCGCTACCTCGCCTTTAAACAAGAGCCATACCGTGCGCTACAAGCTGCTGCATCTGTCGTGCCCGCTGACAAAAGGCCCGGAGCACAGTTCGCGCGGCCGCCGCCGAGGCCTGCCTATGGCCGTGGACTGGCCCTGCGCTACGGGGCGCCGCATCATATCATAGTAGCTCAGGACGGCGAGCCGGAGGACCATTCCCACGAGGCATTCGCAATGCATAAAGACAAAAGCGAGCAGATGCAAGCTTACGTGGCGTCCAGCGAGGCCAACGCGGCGGAAGCGCGGCAGTACGCGGCGGCGCTCGGCGAGCAGACGGCATCCGGTGCGCTCGAAATGATACAGACGACATCGCTGAGCAATCAGCAAGCTGTCGGGGTCGCATACCAGCAAGTGAAGTACGAGACTCGCGGCGAGCCCGAGCCGCGGCCGAGCACGTACGCGAGTCTGCAGCCTGTGACTTCGGTGCACGGTGGGTACGCGTACGCCGAATTGTTGACGCTGTACGGGGGCGCTGGAGGCGCGGGGGCCGCGGCGGGAGCGCCGGGCGGGCGCGGGGACGAGTCGCCGCCGGGCCAGCTGTTGTACCGCGCGGACCCCACGCTTTCCTCTTCGTCGTTGCCGCGCGGGGCGCATGTCGTGTATGGGTCCGTGGTCCCACAGTCGCAGGCTGTGTACGAGGCGCCTCCCAGTCCCAACTCCCAGCAAGTGACGCTGTACACGCACGGCAGCGCGGTGCAGTACAAGGTGGGCGGCGAGCACTACCTGACGCAGGGCGGCGTGAGCGGCGTGGGCGGTGTGGAGTACGTGCCCGTGTCGGGTTACGAGGGCGGGCTCTTGGTGGAGAGCTACGCCGCACCCGCGCAACCCTGGCCAGCGCACAACCTGCTGCCCATAGACGACGGGTTCGACCCCGGTATGGCGGGCATGGGAGAGGTAAAGGAATGCGTGAACTGCGCGGCGGCTACCACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGTAATGCATGCGGTCTCTACACGCGCATCAATGGCGTTAACCGGCCGCCGCTCAAGGGCCAAAAGGCTAAGCCCCAGCAAGCACTCCCGACGAACGGCAACAGGCGCGTGGGAGTGACGTGCGCCAACTGCCGCACCTCCAATACGACGCTGTGGCGGCGCAACAACAACGGCGAACCCGTGTGCAATGCGTGCGGCCTCTACTACAAGCTACACAACGTCAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGCAAACGGAAGCCAAAAAGCATGGGTGGCGGACATGGAGTACCACGACCCGGCGGCGGCCTTTCCGCGGAGGCACACTCGCACAAGGTGCTGCCGCCACTGTACGCAGGCGTGGAGGGCGCGGCGGGCccgctgctgctgctgcccGCCGCGCGCCACCAGAC
Protein Sequence
MENSTSLGRSGEEQRDNDTTRGVMSGAGEAGTGEEALQLVKSEERTGGTGGGQEGASGGDVAGAGVGGGGEPHSVITSRRAMRTITTAGHIADAADLPPDDSVKDEPSETSLDSEHMQYAAKMEESAETRAAHHAYDEERLRLAEAETARYLAFKQEPYRALQAAASVVPADKRPGAQFARPPPRPAYGRGLALRYGAPHHIIVAQDGEPEDHSHEAFAMHKDKSEQMQAYVASSEANAAEARQYAAALGEQTASGALEMIQTTSLSNQQAVGVAYQQVKYETRGEPEPRPSTYASLQPVTSVHGGYAYAELLTLYGGAGGAGAAAGAPGGRGDESPPGQLLYRADPTLSSSSLPRGAHVVYGSVVPQSQAVYEAPPSPNSQQVTLYTHGSAVQYKVGGEHYLTQGGVSGVGGVEYVPVSGYEGGLLVESYAAPAQPWPAHNLLPIDDGFDPGMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGVPRPGGGLSAEAHSHKVLPPLYAGVEGAAGPLLLLPAARHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01139907;
80% Identity
-