Pcly020220.1
Basic Information
- Insect
- Papilio clytia
- Gene Symbol
- pnr
- Assembly
- GCA_018247735.1
- Location
- DWGS01017629.1:942-5281[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 6.5e-13 49.5 3.3 1 35 456 489 456 490 0.97 2 2 8.2e-18 4.6e-14 53.2 7.5 1 35 517 550 517 551 0.97
Sequence Information
- Coding Sequence
- ATGGAGAATACGACGTCGCTGGGACGCGTCGGCGAGGAGCAACACGACAACGATAACGACGAGGCTTTGCAGCTCGTGAAGAACGAGGAACGCTCTGCGGCTGGGACTGGAGGCGAGTTGGAGCCAGCGCCGGGGGCTGAGGGCGCCGGGGGCGGGGGCGAACCGCACTCCGTAATCACGTCGCGCCGCGCGCTGCGTACCATCACCGCCGCCGGCCACATCGCCGATGCCGCCGACCTGCCGCCCGACGACGGTGTCAAGGACGAGCCACCCGAGGCCTCGTCGCTCGAATCCGATCAGCACATGCAGTACGCGCCCAAGATGGAGGAGAGCGTCGAAGCTCGCAGCGCACACCACGCCTATGACGAGGAGCGGCTGCGTCTCGTCGAGGCGGAGACCGCGCGCTACCTAGCATTCAAGCAGGAGCCCTACCGCGCGCTGCAGGCTGCCGCCCCCGCGGACAAGCGACCCGTGGCACAGTTCGCAAGGGCGCCACCGAGACCCGCTTACGGTCGAGGGCTGGCCCTGCGGTACGGAGCGCCTCATCATATTATAGTGTCTCAAGACGGCGAGGCGGAGGATCACCCCCACGACACATTCTTGACCCACAAAGACAAAAGCGAACAGATGCAGGCTTACGTGGCGTCAAGCGAGGCTGGGACGGCAGCGGACGCGCGCCAGTACGCGGCGGCGCTCGGAGAGCAGTCGGCCGCCACCACCACGCTCGAAATGATCCAGACGACCTCCTTGAGCAATCAACAGGCGGTCGGCGTCGCGTACCAGCAGGTTAAGTACGAGACGCGCGGCGAGGTCGAGCCGCGGCCGAGTACGTACGCAAGCCTGCAGCCCGTGACGTCGGTACACGGCGGGTACGCGTACGCCGGTCAAAGCCCGCAGTACGCAGCGAGCGGCGCGTACGGCGCGTACGGCGGCGGCGGCAAGGAGCTGCTGACGCTGTACGGCGGCGCggtggcgggcggcgcgcgggggGACGAGTCGCCGCCGGGCCAGCTCCTGTACCGCGCCGACCCCACGCTGTCCTCCTCCTCGCTCAACTCGCGCGGCGCGCACGTCGTCTACGGCTCCGTGGTGCCTCAGTCGCAGACCGTCTACGAGGCGCCACCGAGTCCTAATTCTCAGCAAGTGACGCTGTACACGCACGGCAACGCGGTGCAGTACAAGGTGGGCGGCGACCACTACCTAACGCAGGGCGGTGGCGTGGAGTACGTGCCAGTGTCGGGGTACGAGGGTGGGCTGCTGGTGGAAGGCTACGCGGCGCCCGCGCAGCCCTGGCCCGCGCACAACCTGCTACCTATCGACGACGGCTTCGATCCCAGTATGGCGGGCATGGGCGAGGTGAAGGAGTGCGTAAACTGCGCGGCGGCGACCACCCCGCTGTGGCGACGTGACGGCACCGGGCACTACCTGTGCAACGCTTGCGGCCTCTACACGCGCATCAACGGCGTCAACCGCCCGCCGCTTAAGGGGCAAAAGGCGAAGCCGCAGCAAGCGCTCCCGACGAACGGCAACAGGCGCGTCGGGGTGACGTGCGCCAACTGCCGCACCTCCAACACCACGCTGTGGCGCCGCAACAACAACGGCGAGCCGGTCTGCAACGCCTGCGGCCTGTACTACAAGCTGCACAACGTGAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGGAAACGGAAACCGAAGAGCATGGGCGGTGGGCACGGTGTGCCGCGGCCCGGCGGCGGCCTCTCGGCGGAGGCACACTCGCACAAGGTGCTGCCGCCGCTGTACGCGGGCGTGGAGGGCGCGGCGGGCCCGTTGCTGATTCTCCCCGCCTCGCGCCACCAGACCGACGCGGTATCAGCGCTAGAGCGTGCGCCGACGTCCGCGGCCGGCGCGCACTACCGGCCGCCGTAA
- Protein Sequence
- MENTTSLGRVGEEQHDNDNDEALQLVKNEERSAAGTGGELEPAPGAEGAGGGGEPHSVITSRRALRTITAAGHIADAADLPPDDGVKDEPPEASSLESDQHMQYAPKMEESVEARSAHHAYDEERLRLVEAETARYLAFKQEPYRALQAAAPADKRPVAQFARAPPRPAYGRGLALRYGAPHHIIVSQDGEAEDHPHDTFLTHKDKSEQMQAYVASSEAGTAADARQYAAALGEQSAATTTLEMIQTTSLSNQQAVGVAYQQVKYETRGEVEPRPSTYASLQPVTSVHGGYAYAGQSPQYAASGAYGAYGGGGKELLTLYGGAVAGGARGDESPPGQLLYRADPTLSSSSLNSRGAHVVYGSVVPQSQTVYEAPPSPNSQQVTLYTHGNAVQYKVGGDHYLTQGGGVEYVPVSGYEGGLLVEGYAAPAQPWPAHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGVPRPGGGLSAEAHSHKVLPPLYAGVEGAAGPLLILPASRHQTDAVSALERAPTSAAGAHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01158403; iTF_01154696; iTF_01155964; iTF_01160156; iTF_01157344; iTF_00840667; iTF_01142084; iTF_00958384; iTF_01403124; iTF_01338152; iTF_00923285; iTF_00204799; iTF_01150031; iTF_01139339; iTF_01144971; iTF_01149239; iTF_01141314; iTF_01145646; iTF_01147100;
- 90% Identity
- iTF_01142084;
- 80% Identity
- -