Pphe006434.1
Basic Information
- Insect
- Papilio phestus
- Gene Symbol
- Lztr1
- Assembly
- GCA_018231625.1
- Location
- DVQH01000627.1:17301-20209[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-10 2.4e-08 35.6 1.3 4 106 358 486 355 489 0.77 2 4 3.1 5.4e+02 2.3 0.1 77 109 489 521 486 522 0.86 3 4 1e-17 1.8e-15 58.6 0.0 2 96 581 675 580 691 0.86 4 4 8.2 1.4e+03 0.9 0.0 77 100 690 713 683 722 0.82
Sequence Information
- Coding Sequence
- ATGAGCCATAGCCCGGAGAATGAGTATTTAGAGTTGGAATTCAACAATGATATGGCACATCAGTGGAGAAAGCTGCCCGAGTGTAGTGGTTTTGTGGGCAATGCTCGGTCAAAGCACACGATCGTCGCCTATGACAGTTGCATTTACGTTTTCGGTGGTAACGATGGCAGCAACAAGATGCTCAATGATGTACTCGTGTTTGATACCAATAAGATGTCTTGGAGTAGAGCGTGCAATAACTCATCTTTAAATGAGTATAATTTCAACTCATATCCAGAATGTCGCTATAATCACTCAGCGGTTGTTAACAAGCATTCGATGTTTATCTTTGGAGgaTATATTGACCGCGAATCAGTCTATGCCAACTGTAACGATTTATACGAATACCAATTTCTAAGAGCTTCATGGATCAAATGGGAAACCAGCGGAACAAAACCTGCGCCAAGATCGGCTCACGGCTGTGCGGTGTATGATGACAAACTGTGGATTTTTGCCGGATACGATGGCAAATCGAGACTTAACGACATGTGGCAGTTACCTCTCAATTCCTATTGTAAAAGCTGGAAGGAAGTGCAACAGTATGGTGACTGTCCACCAACTTGCTGCAATTTTGCCTCAACTGTGGTTCGCGACACGCTCCTAGTCTTCAGTGGGCAATCAGGTGCCAAAATGACCAATGACCTTTTTCGCTTTCACTTTGACACTCAACGCTGGTATCGAATCTCAATGAGTGAGCACTTTTTGCGAAACGGTTCGTTCCCACCCACTCGGCGATACGGGCATACCATGGTGACTTATGATCGCTTTCTCTACGTGTTTGGAGGTGCTGCCGACTCAACCCTTCCCAGCGATCTCCACGCGTTTGACCTAGACGAGCAGACGTGGTCCATCATCAAAGTGGCACGAAGCAGTCAGGTGCCGTCGTGTCGGTTGTTTCACAGTGCCACTGTGATCGGTGACGTGATGTACGTCTTTGGTGGCACCGTCGACAACAATGTCCGAAGTGCCGAGTTGTTTCGCTTTCGGTTCTTCATCTATCCCAAGTGCACCTTACGTCAGGATTTTGGACTGTTCTTGCAGAATCAACATTTGTGTGACATTGAGTTTCAATTCAAAGATATACCCACTGGAAACGAATGCACCATGTTGGCGCACATTAACTTCGTTGTAGCTCGATCTAAGTACTTTTGCAATACATTAACCGAGATGACTGTGAAGCATGGAATAACGCTGGGTCAACTGAACCAGCCAGTTCACATTGAGTTGGGTGAAATGAATTCGCAAGCATTTATCCTACTTCTTCATTACATGTACACCGATCAGATAGACTTCAACAAAGTGACTATTGAACTACTGGACAAAGAGAAAATACTCCTTTTAATTGATGTTTACACGTTAGCTCTTAGATTTCAAATATACCAAAttgatagattaaaaaatatttgtattcaatACCTGAACATCGAACTGAGCATCAATAATGCCTTAGTAGTTCTCGAAAATGCTGTCAGATTGAATCTTGAGTTCATCAAAGCCATTTGTATGAAATACATAATCAAAGAATCTAACTATCTAACGCTATTAATGACCAAGGAATTTGAGAATTTACCCAAATCGTTATTGATTGAAATCGTAAGGAAGAAAGAGAACCAAAGTTCGTGCGAAATGAAACTAACCCAACCCGAAAGGCCAGTAGCGAAGCCTCAGACGGAAAACAACCAAAGTCTCGAGTACGACATGAAGCAGTTTTTACGAAGAGAAGAGTTTGCCGACATCTGTCTTGTTTTAGGACAGAAGGAGTTCAAAGTTCACAAAGCTATTCTCGCGGCAAGGGGCAAATACTTTGAGGCAATCTTTCGCAACTTCATGCCCCGAGACAATCGAGTCTCCTTCCAGTTGGGCGAGGTGACGCCAACCGAAAAGGCCTTGTTGAGTTTGTTGGATTACATCTACTGTGGTGATACCAACATCGCGCCTCAGCACTGTCTCTCACTTTACTTGGCGCCCAACTTTTTGGGTTTCACCAACAACAGACTGCACATCTTTTGCAAGCATAACTTGGAGAGCAATGTCAACGAGAGCAACGTGTTGCAAGTGTTGATTGCGGCCAATCAGTTGAACATCGTCGAGATGAAGCAGTACGCGCTCAATATCATCACACGTAACTTCTCCTCGATTGCCAAGCAAAATGACATCAATGAGCTGGATAAAAATCTATTGCTTGAGATTATTCATAATGTTGCcaaagtgtttaaaatataa
- Protein Sequence
- MSHSPENEYLELEFNNDMAHQWRKLPECSGFVGNARSKHTIVAYDSCIYVFGGNDGSNKMLNDVLVFDTNKMSWSRACNNSSLNEYNFNSYPECRYNHSAVVNKHSMFIFGGYIDRESVYANCNDLYEYQFLRASWIKWETSGTKPAPRSAHGCAVYDDKLWIFAGYDGKSRLNDMWQLPLNSYCKSWKEVQQYGDCPPTCCNFASTVVRDTLLVFSGQSGAKMTNDLFRFHFDTQRWYRISMSEHFLRNGSFPPTRRYGHTMVTYDRFLYVFGGAADSTLPSDLHAFDLDEQTWSIIKVARSSQVPSCRLFHSATVIGDVMYVFGGTVDNNVRSAELFRFRFFIYPKCTLRQDFGLFLQNQHLCDIEFQFKDIPTGNECTMLAHINFVVARSKYFCNTLTEMTVKHGITLGQLNQPVHIELGEMNSQAFILLLHYMYTDQIDFNKVTIELLDKEKILLLIDVYTLALRFQIYQIDRLKNICIQYLNIELSINNALVVLENAVRLNLEFIKAICMKYIIKESNYLTLLMTKEFENLPKSLLIEIVRKKENQSSCEMKLTQPERPVAKPQTENNQSLEYDMKQFLRREEFADICLVLGQKEFKVHKAILAARGKYFEAIFRNFMPRDNRVSFQLGEVTPTEKALLSLLDYIYCGDTNIAPQHCLSLYLAPNFLGFTNNRLHIFCKHNLESNVNESNVLQVLIAANQLNIVEMKQYALNIITRNFSSIAKQNDINELDKNLLLEIIHNVAKVFKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -