Pphe014643.1
Basic Information
- Insect
- Papilio phestus
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_018231625.1
- Location
- DVQH01005633.1:758-4508[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-87 1.6e-83 282.0 34.6 1 299 55 365 55 366 0.89 2 2 0.0017 18 6.0 0.8 124 171 385 432 370 463 0.58
Sequence Information
- Coding Sequence
- ATGGTCAATGGGAGTGTCACTTCGAGTGCTAGCTTTGTGGGAACTGGTGCCTTGCCTACCAGTGCTAGTTTTCTCACTATTGAACAAATGCTCAACACACAAAACCAGCTTCCCTTTTTGCTCTACATTCGAAACTACAATGAGTATCGACGACATAAGCCGGCAGAAGCACGATTGGCGGCACGTCGGCAAGCTCGGGCAGAGGCCCGAGAAATTCGACTTCGAGAGATGGAACGACAACAACGGGAATTAGAAGAAACCGCCGATAGGCACTACGAGCTGCTCAACTCTGGCGCAGGCTCGCTCACTACAAACTCTCAAGACTACCTTCATCGGCAGATTGCCAGAGCAAATCCATTACTGAGTCGAGAGAGTCGAACAGCTTCATATGCCAGTTCAAGACGTTCAAGTCAAGAATCACTTGAATATGTTGGAAGTGATTCGGCACGTGAGCTTCGGCACTATGTACAAGAGTTGGAGGAGAAGTTTCGAAAAGCAATGATTAGCAACGCACAGCTCGACAATGAGAAGCAATCTTTTACCTATCAGGTGGATCTCAACAAAGATGAGATGGAAGAACTTGAGGAGAACTATCTTCGAATTCAGAGAGATTGCAAGGACAAGAGCAggAATCTTGAACTTCTTAAACGGGATCACGAAAAACTTAAATTCGACTTCAGGTGCTACAAAGAGGCTCTTGAAGAGCGAGATAGGATTATCAAGGATGCTGGCCTTGTTATCATTCGCAACTCCGAGACGCaagaagatgatgatgaagaagttTCACTTTTTCTGGCTAATAACATCTCATTAATTAGTAAAGAAGCTGCAACTATGCTTGAAGATATTCCCGGCAATACTCTCGAAGCAAAGTTAGTGGCGATCTTTGGTGAAAACCGTAAAATGGCCTCGACTATTAAAGAATTAACTTCAGAGTTGGAAGAAGAGCGGCAACGGTTTCAATCATTGAATGATTCCTTAACAACTAACTCGGTGCATTTAACAAGTGAGATGCAAGCTGAAATTCAACGTGAAGCTAACAAAATGACCAATGATCTACGGTACAAGTTGAAGAAAAGCGAACAGGAGGTTGCAGCATTAAGTACCAGTGTGGCGCGGCTCGAGACTCAGGTAGCAAGATTCAAAACTGCTACTGAAGAAGCCGAGAAGCTCGAAGAGGAACTCAAATCGGATAAACGGAAAGCACAACGCGAGCTTCGAGAAGCACAAACTCGAATCGATGAGCTCGAATCAGCAAATGCACATCTTCAAAAGCGGATTGACAAGCTCAAATCGAACCGAAATATTTTGGGTATCATAGCAAATGCCAGTTCAGCTTGTAACTCGAGCCCGAGCACACCATCAGTGGAGGCGTCTGTCTCGAGCACACCTTTAGGTGCCACACCTACGCCTCCCCCTTCAACTTGTTCCGATACTAGCACGATATGCTCTACCACTTCTACTTTCACCGATTAA
- Protein Sequence
- MVNGSVTSSASFVGTGALPTSASFLTIEQMLNTQNQLPFLLYIRNYNEYRRHKPAEARLAARRQARAEAREIRLREMERQQRELEETADRHYELLNSGAGSLTTNSQDYLHRQIARANPLLSRESRTASYASSRRSSQESLEYVGSDSARELRHYVQELEEKFRKAMISNAQLDNEKQSFTYQVDLNKDEMEELEENYLRIQRDCKDKSRNLELLKRDHEKLKFDFRCYKEALEERDRIIKDAGLVIIRNSETQEDDDEEVSLFLANNISLISKEAATMLEDIPGNTLEAKLVAIFGENRKMASTIKELTSELEEERQRFQSLNDSLTTNSVHLTSEMQAEIQREANKMTNDLRYKLKKSEQEVAALSTSVARLETQVARFKTATEEAEKLEEELKSDKRKAQRELREAQTRIDELESANAHLQKRIDKLKSNRNILGIIANASSACNSSPSTPSVEASVSSTPLGATPTPPPSTCSDTSTICSTTSTFTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -