Pphe032614.1
Basic Information
- Insect
- Papilio phestus
- Gene Symbol
- -
- Assembly
- GCA_018231625.1
- Location
- DVQH01036323.1:887-1384[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-09 8e-06 27.0 0.0 4 34 15 45 12 54 0.90 2 2 1.4 6.1e+03 -1.5 0.0 17 23 136 142 126 143 0.66
Sequence Information
- Coding Sequence
- atGCCTGGAAACaagaacacatttttaaactacagTGAAGTTGCTATGAAAGCTGCAGTTGAAGATGTTCGCCTGCACAAAATATCTATCCGAGGCGctgcaaaaaaatttacagtCCCCAGAACgacattgaaatgtaaattagagGGTAAATCACCAATGAACAGAAAAATGGGCCCTCCTTCAATTCTAAAAAGCACAGAGGAGGCTGAAATATGCAAATGGGTGGAGAACATGGCACAGGCTGGTTTTCCGGTCACTGTTGAGCAGCTGTGCATCAGTGTGGAGAAGTACTTGAAAGACGTAAAGAGTGATACCCCTTTCAAAGATGGAAGACCAGGCAGGACGTGGGTTATAGGTTTTCTCCGGAGAAATCCTTCGATTTCAAAAAGAGTTTCTCAAAACTTAACTGTCTCACGGGCAGCAGTCACAAGAGAAAACATACTGAACTGGTTTTCAGAAGTGGAGTCCTACATTGCAAAAGAGTATGGTGATTAG
- Protein Sequence
- MPGNKNTFLNYSEVAMKAAVEDVRLHKISIRGAAKKFTVPRTTLKCKLEGKSPMNRKMGPPSILKSTEEAEICKWVENMAQAGFPVTVEQLCISVEKYLKDVKSDTPFKDGRPGRTWVIGFLRRNPSISKRVSQNLTVSRAAVTRENILNWFSEVESYIAKEYGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01438842;
- 90% Identity
- -
- 80% Identity
- -