Pmem005840.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio memnon
Gene Symbol
Baz2b
Assembly
GCA_003118335.3
Location
JAOPJP010000011.1:4053640-4081578[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-10 3.1e-07 30.2 0.0 3 75 640 715 638 717 0.87

Sequence Information

Coding Sequence
ATGGATAAGGAGAACGGCGAGGGCGACGCGGCCGGCAAGCCGCCGCCCGACGGCCTGCTGGATGCCGCTGGACTCTTCGGAGCGTACTGGGGCCGAGATGGGTCTGGCGGCGGGACAGCGGCCGCGCAGGCTCAGGCTCAGGCTCAGGCCCAGGCCCAGGCGCAGGCGCAGGCGCAGGCGGCGCTCTTCGGCTTCGGCTCCCGCTACCCGCCGCCGACCACCCTCGGCGTCGCCGCCAACCAGGCAGCTTCTCTCGGCCTACATCCTGCCGCCAGTGCAGCATGGTGGTCGATGGCGTCGCACCTCGCTGCGCAAGACTATCTAGCGCGGCTCCAAGCCTCCGGCCTCAACTTCCCGCCACTCGGGGACCCGTACTCCGCGCTGTCAGCGCTGTCAGGGGCTACAGCCGGCATGAAGCAACCGCCTAAACATCCCAAGCAGCCAATGAGGAGCGAGAGATCGGGCCGGAGCAGTAGCGGTACATCGTCGAGCGCGTCGTTAAAGGACAAGAGTCCTTCGACTGGCGGTAGCTCGCAGCCGAGCATGAGTGAGTGGGGAACGTCATACGGTTTTCCGAAGACGTCATCACCGTCGGCGATGCACTCCCAGGCGTCGCTGTCGAGTCTCGCCTCTCTCAACAGCCTCGTGTCGGCGCCGCACCAATCCAAGTCCTCCAAGCCACCACAGCAGTCCTCCTCATCTAGGAAGAGCTCATCCAGTTCATCGGGTAAGAGCAAAGACCGCGACCTGGCGTTGCTAAGGGGCGACCTGATGCTGGCGCAGGCGGCTGCGCACGGCGCGTACCATGCGGCAGTCGCGGCAGCCACCAAGGGAAAGAATATGTCACCGCTGTATCCGTTCGGAATGCCAGGCTCGGATAAGGATAGACATGCGGGGATAGATTCACTCACCGGCCTCCCTCATACAATACTCAGTGCCGCTTTGGAGGGCGGTGATCCTTCGTCTGTGCTTGGAGGCGTTCGGTTGCCGCCTGACACGGAGATTATCAAATATACTTCATCACTCGCGGGTCCGAAGGTGCCACCTGGTACGACGAATAGGGGTCGTAAGAAGACGATATCGCTGGACCCGCCTCAAGTGTCGGTGCATCCTTCAGCTGGCGACCGCTCCACGCCGCTGCCCAGCAAACGACCCAAAGTTGAGGAGTACAGCGGGCGGTCGTCAGTGGAGGTGATCAGACTGCCGGGCAAGGCGGAGCGCGCGCACGCGGGCACGCCGCCGCCCAACCTGGCCGACTACGCGGGCATCTCGCGCGAGCTGCTGCAGACCATCGCCAGCCAGAGCGGCCTCAGCCTCGCCGCGCTCGAGAGACAGCTCGCCGCACAACCGGGAGATTCAGGATTAAACCTGAGCACGAAGTCGACAACGTCCGAGGACGCGCCCTTGGACCTCGGCTTCAAGTCCGCCGCCGACGAGGACGCGCCCCTCAACCTGTCGCTGAAGCCTGTACCTCCAAGCACGCAGGCCTCGGACGCGTTGTCACGCCTAACCTCTCTGAGTAGCTCTCTAAACGCTTCGAATGACAGGATATCGCGACGCAAGCCCGGTGCGAAGCCTCGTCGAGTGGCGCCCGAACTGAACTCACACGCCGCGGATTCGCCCAGGCCTAAGTCCAGCGGCAGTGAAGATAGTGAATCAGTAAGTGGCTGGGCGACGCGCGAGGGCCGGCCGCGCAACCTCGGCCGCGGCGTCAGCAAACCCAAGAAGAACACGGTCGCGTCGTTACTGGCGCAGAGCCGCGCACTCGGCCTCAGGCCAGCGCTGGCGCACCAGCTGCTCGCGGAGACTGATCTGGAGAAACTACGTACGTTGCTGGGCGAGAGCGCGAGCACGGACTCCGAGTGTCCGTCTGACAGCGGCCCCTCGGACTCCGACGCCAGCGACCCCGGCCGCCGGCACGACGCGCAGCTGCGGCTGCCCCTCGCACTCGGTTGGAAAAGAGTGACAGTAATCAAGGGCTTATCTCGCAACTGCAACATAAAGGGCGACGTGAGCTACTCCCCGCCGGAGCCGCACTCAGCACTGCCAATAAAATCCATACAGGAACTATGCTCGTTCTTAGATTCGAACCCGTGTCCCCCTCTGTCGTCGGACAACTTCAGCTTCAGCGCGCGCACGCTGCTCGGGGAGTACGTGCAGCCGGCGCCGGACCTCGCTGAACCACTCGTCTTCAATGAGGCTGAAATTACTAAGAGACTGGAGGAAGCGCGTGCGCTGGCGGCGCTGAGCACGCCGCGGCCGACGCCGCCGCCGGTGGAGCGCCGCATAGAGCTGGCGCGGCGCCAGCAGGCCGCACGCGACGCGCGCAGGGACGCCGCGCCGCGCAGGGAACAGGCGCGTCTCGTGCGAGAGTTAGAAAGGTCAGAAAGGGCCGAGCTCGTCAAACGGGAAAAAGAGGCGCGAAGTCAACAACTGTTAGAGCATATCAACAAGAACCGAACGCAGCTCAGCATCGAGCCGCTGGCCAGCGCGCCGCGGCCCGGCTCACGCGCGGACTGCGCTCGGCCTCAGGCAGTGCTGGGCCCCGCCCTCAGGCCCGCCCGGGACCGCACTCTGCCGCCCATTAGCCTCTCCCTCATACCAGTCACCGGGCCTAAGCAACAAAACTTACCTATTAAAACATTAAACTACGACCAATCCGGCTGGAAGGAAGAAGTAGAGGAATACAACGCGTTGGACAAAATGAAAGATTTCGCAGAAAAGGCCGCCTTCGATCTACCGAAAAGGCCGAAAGATAAATATTTCGATTTCTCATTAATGAAATCGGCGGAAAAGAAAACTAATATGCCAGATAAGGAGAACAATTTAGAAAAACTGATCGAATCTTATTCGAGAATTAGTGAATTCATTAACGGCTGTGATTGGTCGAGATTAGACGGCGAGAGTAAAAACGAGGACCCTAAGAGCTTAGAGCAAAAATATTTAGATGCAAAAAACGAATTTATGTCACAAAATCTAATGCTGATGCCGAAAGAATCTCAGAAATCCGTACTAAAGGAGGTGATCGATTTGAGCGGTGATGATGAAAATATACTCAATGATATTATAAGTAAAAAGATCAGCCAAGGGACGTTTAATGTAGGCAAAGACGGTGCGCTTTCGATCTCGGTACATCCCTACGGCAGTAAGGATATGTACTTGGCTAAGAGAAGAAAGCAGGAGGAGTTGGAGAAGCAGAAAATAGAAGACCAGGCTAAGAAGCAACAGGAAAGGGAACTAAAACGACAACAAGCAATTCTCTTAAAAGAACAGCAAAAGTACATAACTGAGGAACGAGAGAGGCGACGTCAGCACACGACGTTCATACGGCAGCTGGAGGGGCGACGGCGCTGGGCGGAGCGCGAGCGCAGGAAGCACCAGAACCTGCTCGACCGCCTCCTGGCTAAGGAGGGCAAGCTGCAGCAGCGCAGGAAGGAGATGGAACTCCTTGCTGAACTCAGGAGACCTCAAGAAGACTCGTCATTATCAGATCAGAAACCTCTGCCTGCACTAAGTAGGATCCCAGGACTGAAGCTCGCCGGCCAGGCCATGGCGGACTTACTACAAGTATACGAATTCATCCACAACTTTGGGCAAACTCTTGGTTTCGatatGGATTCCCTGCCGAGTTTCCAAACACTGCAACAATCTCTGTTGCCTGATAGCAACGCTAACGTGAGAGAGGAACTAATGCAGGTCTTGACTCAGCTGCTAGTCTGTGCTATTGAGGACCCGGGTATTCCTCACCCTGGACGACACACGACGTTGCTGGGACACGCCATCAGACTTGGAGATATTACTCCCGCCAACCTCAGCGAAGTACTGCGTATCTACCTATATGCTAACGCTACTGGAGAGGTCAAAGCCCTCACTGGTCTGACTGCGGAGCGCGAACGCGAGCGCCGCGTGGCGGACCACCACCAGAGCGACGCGGAGATACTGCACACGTGCGCGCACACCAAGAACTCCGCGTACTACGAGCATCTGCACGCCAATCACACATACAAACTATCAGAAAACCTACGCGACAAGCCGTTCCTGGCATTAAATCCGACGACTAAGGCGCGCATCCTGGCGTACCTGTGCGACGAGCTGCTGCAGAGCAAGGCCGTGCTGCGCCAGATAGACGCCTCGCTCGACCACCTCAACCAGCTGCGCAAGGAGCGCTACCTCATGGATATGAAGATACGCAAAGTGCGCGTGCTGCACCAGCGCAAGGTGCGCGCGGAGCAGGCGGAGCGGCAGCAGGCGCTCGCACTGGAGCGCATGCAGCGTCTCGTCGATGACACGCCCACCGGCCCTGCGCACGCGCAGCCGCATGCACTCGTCAACACCTCTGAAGAAGGTCTCTTAAATCATTTAATCAGTGACAAAAGTGAGACACCGAAGAAACTGGACAAAGTTGATTCGCCGCAAGAATCTGAAGCCAACAAACAAGTCGACCTGCCGTCCCCGTACAAAGATAATACACCTATGGAGGAGAGCGACAAAGAACTCTCGCCCTTAAAAGATTTGTCCAATAATATGAAAACTAAAGAGATACTGAACAACAATAAAGACGAATGTTCTCCAGCAGATAACTCAAAGATTGACAAGGACAGTGTTATGGGTGATTGTGACGCTATATTGAGTGATTTAGAAAGTGAAGGCACACAACCTGAAGAGGACGAGGATAAGAACCTATCATCGGAGGAGCTGGGCCGCAAGCTGGAGAAGCTGGTGCGCCAGTCGGAGCAACAGCTGCAGCAGCTGTCCGCCGGCTCGCACGCACTGCGCGCCACTTGCTACGGACAGGACAGGTACTGGCGGCGGTACTGGTCGCTAGGCAAGTGCGGGGGGATCTTCGTCGAGGCGATGGAGTCCGCGCAGCCGGAGATACTGCCCTACCAGGAGGCGCTGGAAGCCGCCGCTCTGAAGGGACAGCCCTTAAGCGATACAGCCAAGAAAAAGAAAAAAGATGTAAAAGAGAAGAAAGAGCCATCAGAAGAGAAGGAGGAGGAGATGGAGACAGACGCGCAGCGTGAAGAAGAAGAACTGCAGAGTGAACTGGAACTGAGGAACATTAAGTCTGAACTGAACTTAAGTGATCACACGCAGATTATCAAGTACGAACCTAACGTGAAACACGGCACTTGTAAAGTTGAAGGTTCTGCGATAAAAATGGAAGAGAAATATATTCAACAAAAGCAAAATAATGAAGAAGAGGACATGCTAGATATTGAAGACTCGATCCCCACCGCGTTCCTAGTCCAGAAACCCACTCACAAACCCATGTTCGCTGCACAAGCGGAACCTATGGATAAGCCTCAAGAGATTGTCAAAGTAGAAAACGTCGTTAAAACGGAAGCTATGGAGAAAGAGAACGTAGAAGAGAGTAAAGATGAACTAGTCAATAATCTGGAAGAATTGAGAAAAATGGCCGAAGCGGTATCCTCTCAATTGGACGCCGCTAAGAAAGCTGAAGCTAAAGTCAAAGACGAAACTGAAATCGTAGAAAGACCAACAAAGAAAGAACTCATGGATGCAGAGAGTGCGCACGCGCAACTTTATACCAAAATGCTCGAAGGAAAATGGTTCTCGATACTAAGGCACGAGAGTTCATATTTGACTAACATTAACGATGAAAAGTGTAACGAACAGAAAGTTCCAGAATTTTGCGATAATGAACACACGTGTTCTGAAGTAGTGATGTGCCAAGGTCATAAATGGGATGTATCGAATAATTTGCATTTACTCAACGATCCGAGTTTATTCACACTCAACAGTATGGTGACCAGTGTGCAAGTGCCTACTAATAATATTTACACAGACTCAAGTCTGACCATGTCTGGTCTGGACCAGGAAATGCTGGATGCTAGTGTTAATAAAGATGAAAATCTTGAAGGGGACGAGGTAGAAGAAGATAATAAAGAACAAGATAACGATTTAGAGAAAGAACTGCAAGCGGACGCGGCGAAGCAGGAGGCGGCGTCGCAGAAGGCGAAGGCTTCCGGCCTCACCAGTCTCGGCCTGCTCAACTTCAACGCGCTCAGCACGTACGTGACATGCGACAGCCCGCCGCCCATACAGATGTCGCCCGAGGAACTCGACCAGCTCGACCATTGCAAGGTCCATGGTCTGCCCAAGAAGTTAGAAGGTGGATTCGTACCTAGAGAACTTCGTCACGGATGGTGGCGTATCAACGACATGGCCGAGGTGGGCGCGGTGATGCGCGCGCTGCACCCGCGCGGCGTGCGCGAGCGGGAGCTGCACGCCGCGCTCGCACACAACCACCATCTGCTCACTGACAAGATGTCCACGGAGAAGAACGACTTAATGCGCTTAGAAAGCACACCATCTGATGAGAAATCGGATCAAGACTATCCTCCGCCCGATTCCCCGAACTCTTTCTGCGCTAAAACCGCTCGTCGCGTTGATATGCAGTTACTAGCAAATATTGAGTCCATAGAGGCTCGTCTAGTGCTGGGGTCTATGTTAGTGAAGAGCTGGCGTCCGTCGGAGGCTCCCTTGTCGTCGGACGCGAGTGGCGCTGAGATCGTGTCCCGCGCGCGCTACGAGCTGGCGTTCCTGGAGGCGCACATCGAGAGGAGATACCTGAAGCCGCCTTTGGTACAGAGGTATGCAGCTAGTACAGAAGTGACATTGGGCGCGATACTGCACGGCGAGCGCGGCAACTCCTCCGTCACCTCGCCGCAGAACACTGAAACCAGTGAACCTAAAGACAACAAGGGCATAGCGCGAGGTCTGAGCACGTGGCGCGAGGCGGTGGGCCGCTGCAACACGTCGGCGCAGCTCGCCATGCTGCTGCAGGCGCTCGAAGCAGCCATCGCATGGGATAAGAGCATCTTGAAAGCGAATTGTCAGTTTTGTCTGTGCGGCGACAACGAGGACCAGCTACTCCTATGCGATGGTTGTGACAAAGGCTACCACACGTACTGCTTCAAGCCACGCATGGAGAAAATCCCCGAAGGCGATTGGTACTGCTGGGAGTGCGTGAACAAGGCTCGCGGCGAGCGCGTGTGCATCGTGTGCGGCGGCGCGTCCAGCGGCCGTACCATACCCTGCGCGCTCTGCGTACGCGCGTACCACATGGACTGCCATTACCCGCCTTTACACAAGAACCCTCGAGGCAAATGGTACTGCTCGCATTGTATATCTCGCGCCCCGCCCAAAAAGCCGCGCAACACCAAGAAGAGAGATAACAAGCACAAAGATAACAGCATTGACCTAGACCAGAGCATGGTCCCCAGTCCTGCGGCGTCTCAAGCGTCTACGTCAACGACAGCGGAGGAGTGCGTGCCGAGCGCGCTGCACACGCCGGAGAAGCACGACGAGCGCGACGATACACTCACTGAGCCGGAGAACGGACTCAACCATCATCccgTAGCTGAGTTGTCAGAGGAGGGTCCGCCGCCGGAGAAGCGACGCGCGCTCTCCGTAGGCAGTAATGGCGCCGTTCAGCACGATGACACTGATCATATGGACGTCGACGATATCAACTCTGAGAATGTGCCGCTGCTGTCCAGAGCGAAAAAAGAGAAAACAAGTGCTAAAAAACTGCTCAAAGAATTGCAGTTTTGCAAGACCCTGCTATCAGAGATGGAGTGTCACGAGCACGCGTGGCCGTTCCTGATGCCCGTCAACACGAAGCACCTGCCGCAGTACCGCAAGGTCATCAAGTGCCCCATGGACCTCTCCACCATCAAGAGAAAATTACACGACGGCACGTATAAATGCAAAGAGGAGTTCGCGTCCGACGTGAGGCTGATATTCAGCAACTGCGAGGTGTTCAACGAGGACGACAGCCCGGTGGGGCGCGCCGGACACGCCATGAGACACTTTTTTGACACCCGCTGGCCCCATGTATGA
Protein Sequence
MDKENGEGDAAGKPPPDGLLDAAGLFGAYWGRDGSGGGTAAAQAQAQAQAQAQAQAQAQAALFGFGSRYPPPTTLGVAANQAASLGLHPAASAAWWSMASHLAAQDYLARLQASGLNFPPLGDPYSALSALSGATAGMKQPPKHPKQPMRSERSGRSSSGTSSSASLKDKSPSTGGSSQPSMSEWGTSYGFPKTSSPSAMHSQASLSSLASLNSLVSAPHQSKSSKPPQQSSSSRKSSSSSSGKSKDRDLALLRGDLMLAQAAAHGAYHAAVAAATKGKNMSPLYPFGMPGSDKDRHAGIDSLTGLPHTILSAALEGGDPSSVLGGVRLPPDTEIIKYTSSLAGPKVPPGTTNRGRKKTISLDPPQVSVHPSAGDRSTPLPSKRPKVEEYSGRSSVEVIRLPGKAERAHAGTPPPNLADYAGISRELLQTIASQSGLSLAALERQLAAQPGDSGLNLSTKSTTSEDAPLDLGFKSAADEDAPLNLSLKPVPPSTQASDALSRLTSLSSSLNASNDRISRRKPGAKPRRVAPELNSHAADSPRPKSSGSEDSESVSGWATREGRPRNLGRGVSKPKKNTVASLLAQSRALGLRPALAHQLLAETDLEKLRTLLGESASTDSECPSDSGPSDSDASDPGRRHDAQLRLPLALGWKRVTVIKGLSRNCNIKGDVSYSPPEPHSALPIKSIQELCSFLDSNPCPPLSSDNFSFSARTLLGEYVQPAPDLAEPLVFNEAEITKRLEEARALAALSTPRPTPPPVERRIELARRQQAARDARRDAAPRREQARLVRELERSERAELVKREKEARSQQLLEHINKNRTQLSIEPLASAPRPGSRADCARPQAVLGPALRPARDRTLPPISLSLIPVTGPKQQNLPIKTLNYDQSGWKEEVEEYNALDKMKDFAEKAAFDLPKRPKDKYFDFSLMKSAEKKTNMPDKENNLEKLIESYSRISEFINGCDWSRLDGESKNEDPKSLEQKYLDAKNEFMSQNLMLMPKESQKSVLKEVIDLSGDDENILNDIISKKISQGTFNVGKDGALSISVHPYGSKDMYLAKRRKQEELEKQKIEDQAKKQQERELKRQQAILLKEQQKYITEERERRRQHTTFIRQLEGRRRWAERERRKHQNLLDRLLAKEGKLQQRRKEMELLAELRRPQEDSSLSDQKPLPALSRIPGLKLAGQAMADLLQVYEFIHNFGQTLGFDMDSLPSFQTLQQSLLPDSNANVREELMQVLTQLLVCAIEDPGIPHPGRHTTLLGHAIRLGDITPANLSEVLRIYLYANATGEVKALTGLTAERERERRVADHHQSDAEILHTCAHTKNSAYYEHLHANHTYKLSENLRDKPFLALNPTTKARILAYLCDELLQSKAVLRQIDASLDHLNQLRKERYLMDMKIRKVRVLHQRKVRAEQAERQQALALERMQRLVDDTPTGPAHAQPHALVNTSEEGLLNHLISDKSETPKKLDKVDSPQESEANKQVDLPSPYKDNTPMEESDKELSPLKDLSNNMKTKEILNNNKDECSPADNSKIDKDSVMGDCDAILSDLESEGTQPEEDEDKNLSSEELGRKLEKLVRQSEQQLQQLSAGSHALRATCYGQDRYWRRYWSLGKCGGIFVEAMESAQPEILPYQEALEAAALKGQPLSDTAKKKKKDVKEKKEPSEEKEEEMETDAQREEEELQSELELRNIKSELNLSDHTQIIKYEPNVKHGTCKVEGSAIKMEEKYIQQKQNNEEEDMLDIEDSIPTAFLVQKPTHKPMFAAQAEPMDKPQEIVKVENVVKTEAMEKENVEESKDELVNNLEELRKMAEAVSSQLDAAKKAEAKVKDETEIVERPTKKELMDAESAHAQLYTKMLEGKWFSILRHESSYLTNINDEKCNEQKVPEFCDNEHTCSEVVMCQGHKWDVSNNLHLLNDPSLFTLNSMVTSVQVPTNNIYTDSSLTMSGLDQEMLDASVNKDENLEGDEVEEDNKEQDNDLEKELQADAAKQEAASQKAKASGLTSLGLLNFNALSTYVTCDSPPPIQMSPEELDQLDHCKVHGLPKKLEGGFVPRELRHGWWRINDMAEVGAVMRALHPRGVRERELHAALAHNHHLLTDKMSTEKNDLMRLESTPSDEKSDQDYPPPDSPNSFCAKTARRVDMQLLANIESIEARLVLGSMLVKSWRPSEAPLSSDASGAEIVSRARYELAFLEAHIERRYLKPPLVQRYAASTEVTLGAILHGERGNSSVTSPQNTETSEPKDNKGIARGLSTWREAVGRCNTSAQLAMLLQALEAAIAWDKSILKANCQFCLCGDNEDQLLLCDGCDKGYHTYCFKPRMEKIPEGDWYCWECVNKARGERVCIVCGGASSGRTIPCALCVRAYHMDCHYPPLHKNPRGKWYCSHCISRAPPKKPRNTKKRDNKHKDNSIDLDQSMVPSPAASQASTSTTAEECVPSALHTPEKHDERDDTLTEPENGLNHHPVAELSEEGPPPEKRRALSVGSNGAVQHDDTDHMDVDDINSENVPLLSRAKKEKTSAKKLLKELQFCKTLLSEMECHEHAWPFLMPVNTKHLPQYRKVIKCPMDLSTIKRKLHDGTYKCKEEFASDVRLIFSNCEVFNEDDSPVGRAGHAMRHFFDTRWPHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01149618;
90% Identity
iTF_01142411; iTF_01140940; iTF_01144556; iTF_01149618; iTF_01148832;
80% Identity
-