Pmem004030.1
Basic Information
- Insect
- Papilio memnon
- Gene Symbol
- kn
- Assembly
- GCA_003118335.3
- Location
- JAOPJP010000003.1:3864386-3872816[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-145 1.7e-140 469.4 0.0 177 387 4 232 2 237 0.98 2 2 0.00032 7.2 5.1 1.3 442 517 255 326 241 376 0.61
Sequence Information
- Coding Sequence
- ATGCAGACAGATGTAATTTTTTACAGATTTTTTCTTAAATTCTTCCTGAAATGCAATCAGAATTGTTTGAAAAACGCCGGCAACCCTCGAGATATGAGAAGATTTCAAGTGGTGATATCAACACAAGTAATGGTGGACGGACCGCTGCTCGCCATATCAGACAACATGTTCGTGCACAATAACAGCAAGCACGGCAGACGCGCCAAGCGCCTAGACCCGTCTGAAGGTACTGACGCCGCGCCAGACAATCATTCAGGTCTGTACCCTCCCCTGCCCGTCGCGACGCCGTGCATCAAGGCGATATCACCGAGTGAAGGCTGGACTTCAGGAGGCTCCACTGTCATTATAGTAGGAGACAACTTCTTCGACGGCCTACAAGTTGTGTTCGGAACAATGTTAGTTTGGAGTGAGTTAATAACATCACACGCGATACGGGTGCAGACACCGCCCCGTCACATACCCGGCGTCGTCGAGGTGACCCTGTCATACAAGAGCAAGCAGTTCTGCAAGGGAGCGCCTGGCAGATTTGTATATGTTTCAGCGCTCAACGAGCCCACGATCGACTACGGCTTCCAGCGACTGCAGAAATTGATACCGAGGCATCCTGGTGACCCTGAGAAATTACCAAAGGAGATAATCCTGAAGCGAGCGGCAGACTTAGCGGAGGCGCTGTACTCTATGCCTCGCAACAACCAGCTACTGCCGCGAACGCCACCGCCCTCTGCACCCTTCAACACATACGCACAGGACGCAACCCCCCACCAGTGGACTGAAGAGGAGTACGCGCGCAGCGGCGGCTCGGTGTCGCCGCGGTACTGCGCGGGCGCAGCCACGCCGCACTACGCGCAGCACTACGCGCCGCCCACCTCGCTCTTCAACTCCACGTCACTGTCATTAGGACCTTACCATCCGAGTGCAAATGGACAAATAGCTGACCATCACAGCTATGACGTTTATTACTCGAAAGATAGCGTCCATTACGATGAAAGGAATGAGAAATGCTCGGACGACCTCCAAGCAAACAGTCATACAAAATGCAGCCCCGGCTATATGAAAGGGCAACAGTGTAAAGAGGTCACGCTAAGAAGCGCGTTCGCGGCTGTAAAGCAGAACCCGCACATAGCTGCCAACATTTAG
- Protein Sequence
- MQTDVIFYRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDAAPDNHSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLLPRTPPPSAPFNTYAQDATPHQWTEEEYARSGGSVSPRYCAGAATPHYAQHYAPPTSLFNSTSLSLGPYHPSANGQIADHHSYDVYYSKDSVHYDERNEKCSDDLQANSHTKCSPGYMKGQQCKEVTLRSAFAAVKQNPHIAANI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01145837;
- 90% Identity
- iTF_01147896; iTF_01156073; iTF_01145837; iTF_01129842; iTF_01140023; iTF_01139972; iTF_01140729; iTF_01138752; iTF_01138700;
- 80% Identity
- -