Pkot002489.3
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- kn
- Assembly
- GCA_018246255.1
- Location
- DWLS01000930.1:11655-19117[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-119 2e-115 387.1 0.0 209 387 6 202 1 207 0.97 2 2 0.0024 15 4.5 0.4 442 486 225 269 216 367 0.66
Sequence Information
- Coding Sequence
- ATGCAGTCCTTTATCGACgTGGTTATATCAACGCAAGTAATGGTCGACGGGCCCCTGCTCGCGATATCCGACAACATGTTCGTCCACAACAACAGCAAGCACGGGCGGCGCGCTAAGCGCCTGGACCCGTCTGAAGGTATTGACGCCGCGCCAGACAATAATTctGGACTATACCCACCGTTACCCGTAGCGACTCCTTGCATCAAGGCAATATCACCAAGCGAAGGATGGACGTCAGGAGGATCTACTGTTATAATAGTAGGAGACAACTTCTTTGATGGACTTCAAGTTGTATTCGGAACTATGTTAGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTGCAGACACCGCCGCGGCATATACCCGGGGTGGTGGAGGTGACGCTTTCATACAAGAGCAAGCAGTTCTGCAAAGGAGCGCCCGGGAgatttgtttatgtttCAGCTCTCAACGAGCCCACCATTGACTACGGCTTTCAAAGACTACAAAAACTTATACCGAGGCATCCAGGCGACCCAGAGAAATTACCAAAGGAAATAATCCTGAAGCGCGCGGCAGATCTGGCTGAGGCGTTATATTCTATGCCGCGCAATAATCAGCTCCTGCCGCGCTCACCGCCTCCATCCGCTTCTTTCAACACCTACGGGCAGGATGCAGCACCACACCAGTGGACTGAAGAGGAGTACGCGCGTAGCGGCGGCTCGGTGTCGCCGCGGTACTGCGCGGGCGCAGCAACGCCTCACTACGCGCAGCACTACGCGCCGCCCACCTCCCTCTTCAACTCAACTTCACCGTCGTTTGAACCGTACCACACGGCACTGAACGGACTTACCGACCATCACTATAACGTTTATAACTTGAAAGATAGCGTCCATTACGTTGAAAGGAATGAGAAATGCGCGGTCGACTTCCAAGCAAACAGTCATACAAAATGCAACCAGGCCCATTTGAAAGGGCAACACTGTAAAGAGGCCAAGCTAAGGAGCGCGTTCGCTGTCGTAAAGCAGGGCCCGCAACATAGCTGGGAACACTTATCCGTGCAGTGTCCAATTTGTTCTGCTGCAGGAATGAGTGGTCTGGTCTCCTCCCCGTTCAGTGTGAATCCGTTCTCGCTGCCGACGTGCAGCGCCCAGCAGTACGCGCAGACAGCGCCGCTCGCTTCCAAGTAA
- Protein Sequence
- MQSFIDVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGIDAAPDNNSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLLPRSPPPSASFNTYGQDAAPHQWTEEEYARSGGSVSPRYCAGAATPHYAQHYAPPTSLFNSTSPSFEPYHTALNGLTDHHYNVYNLKDSVHYVERNEKCAVDFQANSHTKCNQAHLKGQHCKEAKLRSAFAVVKQGPQHSWEHLSVQCPICSAAGMSGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01145837;
- 90% Identity
- iTF_01145090;
- 80% Identity
- -