Pmem001794.1
Basic Information
- Insect
- Papilio memnon
- Gene Symbol
- dl
- Assembly
- GCA_003118335.3
- Location
- JAOPJP010000030.1:7703452-7710858[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-36 1.2e-32 113.6 0.5 14 100 18 107 13 112 0.92 2 2 6.4e-11 3.6e-07 30.6 0.0 128 169 108 149 106 149 0.94
Sequence Information
- Coding Sequence
- ATGTACACTCGGTCTAATTTTTGGCATTTACTTTTCGATCATGAGACACTGTTTCGTTACGAGTGCGAAGGCCGGTCCGCGGGCTCGATCCCCGGCGTGAACAGCACCAGCGAACGCAAGACGTACCCTACCATTGAGATCTCCGGCTGCACCGGCAATGCTATCGTCGTCGTCTCCTGCGTCACCAAGGACCACCCATACAAACCGCACCCCCACAACCTGGTGGGTCGGGAGCGGTGCGAGCGCGGCGTGTGCACGGTGAAGGCGGAGCTGAGCGGCGACAGCACGCTCGTCTCCTTCAGCAACCTCGGCATACACCACCGCGGGCAGCCGCAGAGCATCGACCTGAACGCGGTGCGGCTGTGCTTCCAAGTGTTCGTGACGGGGGAGCGCGGCAAGGTGCGGCTCGCGCTGGCGCCCGCCGTCTCCGACGTCATCTTCGACAAGAAGGCCATGAGCGACCTGCACATCGCGCGCGTCTCGCACTGCGCCGGCCCCGCCGCCGGCCGCATGACCATGATACTGCTCTGCGAGAAGGTGACAGGACAGGACACCGCGGTGGTGTTCTTCGAGAAGAAGAACGAGAAGGTGGTGTGGGAGGCGGCGGCCACCAACGTGCACGTGCACAAGCAGGCCGCCATCGCCTTCGACATCCCGCCCTACCAAGACCCCGCGCCGCGCGACAACGTCAAGGTGTACCTGCAGCTGAAGCGGGTGACGGACAACGCGCGCAGCAACGCCGTCGACTTCGAGTACACCGCGCCCCCAGGTACCGCGCGCAAGCACCCCCTCGACCTCGCGCTCTACGCGCCCCCCGGCCCGCTGCTGCGCCGCAAGGCCCCCGACACCAACAACAACCGCGCCTCGCCCCCGCCCCCGCCTCCACACTCGCCCTCACCACACACACACCCCGACACCGCACACTCCGCCGACACCGACCCCGTCAGCTCCACCAGCGGCGATGCCGACCCCGACCCCCAGCCCGACACCCAGCTCGCCCCCCAACCAGACCCCCCAGACAACACCCACTCCCAGCTGAACGGCGACATCGCCGACGCGGTGGACTCCCCCGAGAAGAGTCTCGACGACCTGCTGGAGCAGGTGGCGGAACTCGACGAGATATACTCCGAGAACAGGACGCGGCTGGAGACGGCGGGCGGCGCGGGGGACACGGGGGGCGCCGACACCGACCTGGAGGACTTCGACGACGCCGGCACCTACACCAGTCTGCAGCTCGCCTTCCGCAACCCCCTGCCCATCGCTGAGCCCCCCGCGTCCGCGCCCGACCCCCCGCCCTACGAGGACGTGCACGTGCAGACCTATCGCGGACCCATCATCGAGTTCACGACGCTCAAGCGCGACACCGACGACGAGCGCGCGCCGCCGCTGCCGCCCAAGCGCGTGCGCAAAGCCAACGACTCCCTGCGCGCCTCGCACACCTCCGTCGATACCATCCTGCGCCCCGGCCGCCCCCTGCCGCTCGCGCGCAGCGAGCCCGCCCTGCCCCCCGCGCCCAAGAAGCGCTCCTTCTTCTCGCGCCTCTTCCGCCGCAAGGAGAAGTCGCCCGCGCCCAGCGCCAAGTCGGCGGAGGGCGCGGCGGCGGCGGCGGCGCGCGCGGGCAGGGCGGCCGGCCGCTCCGTCAGCAGCGTGTCGGGGCAGCGGCCGGCGCGCTTCCGCTCCGCCGTGTCGCACACCTCGCTCAAAGACAACGCGTCGGGCGCGGGGCTGAGCTACGCGGACAGCGTGACGCACATCTCGCTGCACGCGGAGCCCGACGAGGTGTCGCAGAGCTCGCTGCGCCGCTCGGGCCCTCTGCCGCCCGCCGACGGCACCATCCTGGTGGCGGAGAGCGTGCTGGCGCTGGACGCCGGCGCCTTCCGCAAGCTGCAGGACGACCTCGACCTCACCGACGCCGAGCACTACGCGCTCTACATGGCGCTCGCGCCGCACGCCACCGCCTCCGAGAGGCTTGAGTGTTGCAAGGATCTGTAA
- Protein Sequence
- MYTRSNFWHLLFDHETLFRYECEGRSAGSIPGVNSTSERKTYPTIEISGCTGNAIVVVSCVTKDHPYKPHPHNLVGRERCERGVCTVKAELSGDSTLVSFSNLGIHHRGQPQSIDLNAVRLCFQVFVTGERGKVRLALAPAVSDVIFDKKAMSDLHIARVSHCAGPAAGRMTMILLCEKVTGQDTAVVFFEKKNEKVVWEAAATNVHVHKQAAIAFDIPPYQDPAPRDNVKVYLQLKRVTDNARSNAVDFEYTAPPGTARKHPLDLALYAPPGPLLRRKAPDTNNNRASPPPPPPHSPSPHTHPDTAHSADTDPVSSTSGDADPDPQPDTQLAPQPDPPDNTHSQLNGDIADAVDSPEKSLDDLLEQVAELDEIYSENRTRLETAGGAGDTGGADTDLEDFDDAGTYTSLQLAFRNPLPIAEPPASAPDPPPYEDVHVQTYRGPIIEFTTLKRDTDDERAPPLPPKRVRKANDSLRASHTSVDTILRPGRPLPLARSEPALPPAPKKRSFFSRLFRRKEKSPAPSAKSAEGAAAAAARAGRAAGRSVSSVSGQRPARFRSAVSHTSLKDNASGAGLSYADSVTHISLHAEPDEVSQSSLRRSGPLPPADGTILVAESVLALDAGAFRKLQDDLDLTDAEHYALYMALAPHATASERLECCKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -