Basic Information

Insect: Papilio machaon
Gene Symbol: -
Assembly: GCA_001298355.1
Location: NW:1024849-1031275[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00016 0.0083 16.2 0.3 1 23 202 224 202 224 0.97

2 28 0.00041 0.022 14.9 0.7 2 22 256 276 255 276 0.93

3 28 4.4e-05 0.0024 17.9 0.3 2 23 306 328 305 328 0.96

4 28 0.0016 0.088 12.9 1.7 1 23 379 402 379 402 0.97

5 28 0.014 0.73 10.1 0.1 1 23 421 443 421 443 0.96

6 28 0.00034 0.018 15.1 1.8 2 23 482 503 481 503 0.97

7 28 0.00022 0.012 15.7 1.6 2 23 542 564 542 564 0.97

8 28 5.4e-05 0.0029 17.6 1.5 1 23 614 637 614 637 0.97

9 28 0.00063 0.034 14.3 0.2 1 23 693 715 693 715 0.98

10 28 0.0059 0.32 11.2 6.1 2 23 727 748 726 748 0.97

11 28 0.067 3.6 7.9 2.3 2 23 760 781 759 781 0.96

12 28 0.0049 0.26 11.4 1.1 1 23 791 813 791 813 0.98

13 28 0.0017 0.09 12.9 3.6 1 23 839 861 839 861 0.96

14 28 5.9e-06 0.00031 20.6 1.1 1 23 872 894 872 894 0.98

15 28 0.0029 0.16 12.2 1.2 1 23 902 924 902 924 0.95

16 28 0.00023 0.012 15.6 0.3 2 23 944 966 943 966 0.97

17 28 0.99 53 4.2 1.0 1 23 984 1006 984 1006 0.91

18 28 1.5 81 3.6 4.5 1 23 1013 1035 1013 1035 0.95

19 28 0.0078 0.41 10.8 2.8 2 23 1046 1068 1045 1068 0.95

20 28 0.001 0.053 13.6 0.3 1 23 1090 1112 1090 1112 0.97

21 28 6.1 3.3e+02 1.7 5.9 2 23 1155 1177 1154 1177 0.94

22 28 0.0042 0.22 11.7 0.9 1 23 1192 1214 1192 1214 0.94

23 28 0.3 16 5.8 4.7 3 23 1222 1242 1220 1242 0.96

24 28 0.0056 0.3 11.3 1.0 2 23 1253 1275 1252 1275 0.95

25 28 2.7 1.4e+02 2.8 5.4 2 23 1292 1310 1292 1310 0.88

26 28 1.3 69 3.8 1.3 2 21 1314 1333 1314 1334 0.92

27 28 0.17 8.9 6.6 0.4 2 23 1383 1404 1382 1404 0.93

28 28 0.00039 0.021 14.9 0.2 2 23 1415 1437 1414 1437 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00016	0.0083	16.2	0.3	1	23	202	224	202	224	0.97
2	28	0.00041	0.022	14.9	0.7	2	22	256	276	255	276	0.93
3	28	4.4e-05	0.0024	17.9	0.3	2	23	306	328	305	328	0.96
4	28	0.0016	0.088	12.9	1.7	1	23	379	402	379	402	0.97
5	28	0.014	0.73	10.1	0.1	1	23	421	443	421	443	0.96
6	28	0.00034	0.018	15.1	1.8	2	23	482	503	481	503	0.97
7	28	0.00022	0.012	15.7	1.6	2	23	542	564	542	564	0.97
8	28	5.4e-05	0.0029	17.6	1.5	1	23	614	637	614	637	0.97
9	28	0.00063	0.034	14.3	0.2	1	23	693	715	693	715	0.98
10	28	0.0059	0.32	11.2	6.1	2	23	727	748	726	748	0.97
11	28	0.067	3.6	7.9	2.3	2	23	760	781	759	781	0.96
12	28	0.0049	0.26	11.4	1.1	1	23	791	813	791	813	0.98
13	28	0.0017	0.09	12.9	3.6	1	23	839	861	839	861	0.96
14	28	5.9e-06	0.00031	20.6	1.1	1	23	872	894	872	894	0.98
15	28	0.0029	0.16	12.2	1.2	1	23	902	924	902	924	0.95
16	28	0.00023	0.012	15.6	0.3	2	23	944	966	943	966	0.97
17	28	0.99	53	4.2	1.0	1	23	984	1006	984	1006	0.91
18	28	1.5	81	3.6	4.5	1	23	1013	1035	1013	1035	0.95
19	28	0.0078	0.41	10.8	2.8	2	23	1046	1068	1045	1068	0.95
20	28	0.001	0.053	13.6	0.3	1	23	1090	1112	1090	1112	0.97
21	28	6.1	3.3e+02	1.7	5.9	2	23	1155	1177	1154	1177	0.94
22	28	0.0042	0.22	11.7	0.9	1	23	1192	1214	1192	1214	0.94
23	28	0.3	16	5.8	4.7	3	23	1222	1242	1220	1242	0.96
24	28	0.0056	0.3	11.3	1.0	2	23	1253	1275	1252	1275	0.95
25	28	2.7	1.4e+02	2.8	5.4	2	23	1292	1310	1292	1310	0.88
26	28	1.3	69	3.8	1.3	2	21	1314	1333	1314	1334	0.92
27	28	0.17	8.9	6.6	0.4	2	23	1383	1404	1382	1404	0.93
28	28	0.00039	0.021	14.9	0.2	2	23	1415	1437	1414	1437	0.95

Sequence Information

Coding Sequence: ATGGCCCTCAAGCTTGGAAAATGTAGGCTCTGCCTCAAACTCGGCGACTTTTATTCCATCTTCACGATGGATAACAACTTGCAGCTCGCGGAGATGGTTATGGAATGTGCTCGAGTAAAGatatatgaAGGAGATGGACTGCCAGATAAGATATGCTCAGAGTGTATTCAGAAGCTTAGCAGTGCACACATATTCAAGCAGCAGTGTGAAAGATCGGATCAGGAGTTGCGACGGAATTATGTGCCTCCACctgGTTACAGTGCTGTACCTTCACCTACAAACAGGCAGAGCAGCGACTCAGCATTCTCTAACAACACAGATGTGTCTGTTAAGACTCAGGCCACAACATCGCCGACGGAAACAAAAGTCTCTCCTGCAAGTCGGAGCAGAAAACGTAGTGCGGAAAGTATTGACAATACATCATCCAGCGGACAATCCTATGACTACCGACCCACCTCTACTAAACGAGTGGCGGAACTTCGTGCTGCAGAAAAAAGGCCAAGAAGAACCCTTAACTCTTCTAATGCAGACTCTGATTATGAAGACAATAGTGGTTCCCAATGCTCTGTTGAAACTGATTCTGATGAACCATCAAAGAGCGAATTCAAATGTAAAGTTTGTGGCAAAGAATTCGCCTCACAAAAAGGTGTGTCCGCTCATTCCAAAGTTCATTTAAGGAAAAGTTACAAGAACGTTATAGTCAACATACCACAACCTGTTGAGAATAGTGAAGTCGAGAATGCCAATGATATTGAGGATAAGATGGAATGTGAGAAATGTGACAAGAAATTTAAGTtgaaaataatgttgaaaCGTCACCAAGAAACGTGCGGAAAGATATTACCAAAGTCACCAATTAAAGAGTTGCAAGTTTCACTGGAGCCAATTGACTCTGTTTCCTcgcaaaacaaaattgaatgtGAAATGTGCTcgaacaaatttaaaactatagaTAATTTGGAGAAACATATGAGAGTAGTGCATGCGGCTGTTCTAAAACGCGATAAATATGAGCAAATAGTTGAAAACGGTGCGAACGTCGCCCCTTGTTATTTTTGCGCGCAGCCATTCGAGGACTATAATGTTTACATTGAACACTTTGATAATTGTTCAAAGAAGCGcgatgttattattttcacatgTCCACTCTGCCGCAAAGTTTTGTCTAAAAAGAGCACTTATTTccttcatataaaaaatatgcatttgTCTGTTTGTGGGGAACAAAACAAGAGTGTCGACAAATCTATGGAAGGTTCATTTGAATGTCGCATATGTAGCAAGAAGATGGTGTCTCAAGACCAGCTCATAAGTCATCTGGCAGGGCATATGTCCAACATGGGTGATGATGAAATGGCCGAAGTCAATACATGTGAAAGTCCTACAGACAATGAAGCAGATTTAGCAAACTACTCAAATCCTCATGTATCTTCTGGACCTCTGAAGTGTAGCATGTGTGAGAAACGATTCACCTATAAGAAAGCTCTCGTCACTCATGAACAGAAGCACTTGGATGGAGAGTTAGAGATAAAACAAGAGCCAGAGGAGAAGGACAGCAGTTTGCTGAGCGAGTCCTACCGTGAGTCCGAGTCGGAATCTAGTCAAGAAGACGATGACGACAATACATGCGATATTTGTGAGAAGGAATTTTCTTACAAGCGTCTGTTAATTCAGCACAAGAAGACCAAACATAACATGAGCTCCGGCACGAAGAGAGCCAAAATCAGCCTCAAAGACTGCAGTGTGAGGTGTCTCATCTGTGACATAGAAATGAAAGTGAGCGCAATAAACGAGCACAACCAGAAACACACAACTATTAACATAAAGCCTCGTAATCTGTACACGTGTGCAGAATGCAATGAGAAGTTTAAGAGCTGCAGCTCACTGGCTACGCACATCAAGTTGGTGCACCGGCTGAAGCAGCCGCAAACGCCCAAGCTGCAGCGCGCGGAGTTGGCGGATTTTTGTGAGGTCGTCGTGACCAAGACGGAACCTCTGGCTTCGGGCCAGGATCGCGACGACCTTGTGACGGTTCCGTCTGTTCCCGAGTCTGCACCACTAGTCAATCTGTCCGGCTTCACCTGCCCCACCTGTGGCAAGCAGATGCCCACCTTGATATCACTGAAGAGGCACATCAACTGGCATTCTAATGTCGGCAACAACATTGAAAAGAAGCTGGAATGTTTTGTCTGTAAAGAGGTATTCCGGTTCCAGTGTCACTACCGGCTGCACATGCGAAAACACTACAACGACACAAACCTGGACCCCGCGCTTCTCACCTGCACCATCTGCAACCGCAAGAGCAAGCACCTCCGCGCCGCGAAGGCACATATGAATTTCCACAAACAGACGCGTTTCAAGAATAAGGACTACCAGTGCTCCATATGCAAGAGAGTCTTTCAGTTCCGAAAGGTGTACCTTTCCCACATGGCGATACACTACAAGCGAGGCGAGAGCGCCAACAACACGGTGGTCGGCATCGAGTCGGCCGTCGCCCGCGAGCCCGCCGCCGCACACACCTGCCAATACTGCGGGAAAGTGTGCGACTCCGAAGTCTCGCTCAAGCATCATGTCATATGGCACAAGTCGAAGACCTCGCTCTTCGGCGCCCGTCATGAATGCAACATCTGCGGCATTATGTTCACCAACAAGAGAACATTGGAGCTGCATGTCCGATCTCATTACGAGGACGACAATGGCCCTTACAAATGTACAATATGCGGGAAAGGATTCATCGACGAAGTCTATCACAGAAAACACGTGAAGGGGCACAACTTTGATCACCAATCGCACCAGGCCAGGATAGCGAAGCTCAGAAAGGACAAGGTTAAGTGCCCGATTTGTAGCCGATTCTATCCCGATCTCGTTAAACTCATCCGTCATCTGCGGCGGACGCATCCCGAGAGCAAAATGATAAAGAACGATCCGGATGCGCCTCAGCAGAGTTACTTCTCGTGTAAACTGTGCGCCAAAGTATTCCTCGACGAGCGCAGGCTGCAGCACCATGAGGAGGCCCACTTGAGGAAGCCGGAGTTCTTTAAATGCAAATTCTGCGGCAAGAAGACCATGTCGTTGAAGGGTCATCGCCTGCACATTAAATCTCACttgacacaaaaatatatcgatGAGCCTCTCAAGTGCATGCATTGCGAGGAAACCTTCACGCGGGGATACGATCTGCATTATCACCTGCGCGACGTCCACGACATCACCGAGACGTGGATAGCGGAGCGCACCGAGATAACGCTGAATGGACCTCTCAAAGAGTTCCAGTGCTCCATCTGCCTTAAGATACTCGCGAGCAAAGGCAACTTCGAGCGACACATTGATTACCACAATTCACTGAGGTGCAACTACTGCTTCGACTACTTCAGCTCGCTCAGATTCCTGGAGGGCCACCTCACCTTCAGCTGCGACAAGAAGAAACTCGTCGGCGACACGGAGGTGTATCCCCGGAAAGTGAAGTGCCATATCTGTTACAAAGCATTTCATCTTCAAGTTAAATTAGACTGTCATCTGAGAACTCAGCacaatattaaagtttgtaaagAGGTGTCTGAAGGTAAAAAGGACTTTGTCTGCGATTATTGCTTTAAAGTGTTCGAGAATGAGTTCGCTCTGAGTACTCACAAAGTCTATCATCGCACCGTCGGTTTCTACGGCTGCCTGTACTGCAACCGAAAGTTCAACACACTGACGGTGTTCAAAAAGCATAAAAACCATCATTTTTCACAGCTGAACGTCGACAACCCGACCAAGTGCGAGCACTGCGATGAGACTTTTGTCGCATTTAGAGAGTTTATATATCACATGAGAGATGTCCACGGGGACGATAAGGAATGGACGGTATTGCCCAAAGAGTCGATAGAGGAAAAGTGCCATATTTGCAACAAAATATTCTTCAACCTCCACAAACATTTGGCATACCATGAAGAGAATAGATGTAAAAAATGCTCAGAGTATTTTTACTCCCAGATTGAGTACGACAATCACCTGTGCGCAATAGAGAGTGAAGAAGAGGTCGATGAGAAGAACGAAAGTGATCTAAGACCGAAATACGAGGAGTGTGCGTTTTGCTTCAAGCCCACGACGAAGAAGAACTCGCAGCGGCTGCACGACCATATCCATAAGGTGTCCGGCTCCATCTCGTGCCGCTTCTGCCCTCTCAAGTTTAAAACTATTGACGCGTTCAACATCCACGCGTTCTCCCACCGCAGCAGAAAGTACGACAAGAAGCCGATAAAGTGTCGGCAGTGCGGGGAGAAATTCGTGCGCTACGGACCCTTCATAAGGCACATGAGGGCGGTGCACAAGTCGAAGCAGAAACTGCACTACCGCGCGATGGTGCGCCCGGAGCCGTGCGTCGTCTGCGGGGATCTCTTCCCCAACTTGCACAACCACTACCGCGCGCATCTCCAGAACCAGTGCCAGCAGTGCCGCAAATACTTTACTTCTTGCAAAGTGTTCTCACAACACGAATGCGACAAAGAGGATTCTAACCCATCGAAAGTGTTCACCTGCGACGAGAACCTCTTGGCTCTTATCAATTCGTACACGCCCAAGGACGAGAAAGACGACGAGAAATTCTACGGGCACAGCGATGATGAGGACGAGATGGCCGTGGAGCCGAATGTACCTCACAATGATTACATGACACAAGATGAGGAGAGTCAAAATTCTACAGATATGAGTATTCACCAAATGGTCCATGCGCCCATTATATCAGATGTTCTATCGCTTTACAAGCAAAAGGAAGAAGAGTCTAATGTGGTCGACTTGGTGGATGATAACAGCCTAGACGGTGAAGATATTGTTAACATCATTACTATAGATGACTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECARVKIYEGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGYSAVPSPTNRQSSDSAFSNNTDVSVKTQATTSPTETKVSPASRSRKRSAESIDNTSSSGQSYDYRPTSTKRVAELRAAEKRPRRTLNSSNADSDYEDNSGSQCSVETDSDEPSKSEFKCKVCGKEFASQKGVSAHSKVHLRKSYKNVIVNIPQPVENSEVENANDIEDKMECEKCDKKFKLKIMLKRHQETCGKILPKSPIKELQVSLEPIDSVSSQNKIECEMCSNKFKTIDNLEKHMRVVHAAVLKRDKYEQIVENGANVAPCYFCAQPFEDYNVYIEHFDNCSKKRDVIIFTCPLCRKVLSKKSTYFLHIKNMHLSVCGEQNKSVDKSMEGSFECRICSKKMVSQDQLISHLAGHMSNMGDDEMAEVNTCESPTDNEADLANYSNPHVSSGPLKCSMCEKRFTYKKALVTHEQKHLDGELEIKQEPEEKDSSLLSESYRESESESSQEDDDDNTCDICEKEFSYKRLLIQHKKTKHNMSSGTKRAKISLKDCSVRCLICDIEMKVSAINEHNQKHTTINIKPRNLYTCAECNEKFKSCSSLATHIKLVHRLKQPQTPKLQRAELADFCEVVVTKTEPLASGQDRDDLVTVPSVPESAPLVNLSGFTCPTCGKQMPTLISLKRHINWHSNVGNNIEKKLECFVCKEVFRFQCHYRLHMRKHYNDTNLDPALLTCTICNRKSKHLRAAKAHMNFHKQTRFKNKDYQCSICKRVFQFRKVYLSHMAIHYKRGESANNTVVGIESAVAREPAAAHTCQYCGKVCDSEVSLKHHVIWHKSKTSLFGARHECNICGIMFTNKRTLELHVRSHYEDDNGPYKCTICGKGFIDEVYHRKHVKGHNFDHQSHQARIAKLRKDKVKCPICSRFYPDLVKLIRHLRRTHPESKMIKNDPDAPQQSYFSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTMSLKGHRLHIKSHLTQKYIDEPLKCMHCEETFTRGYDLHYHLRDVHDITETWIAERTEITLNGPLKEFQCSICLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLTFSCDKKKLVGDTEVYPRKVKCHICYKAFHLQVKLDCHLRTQHNIKVCKEVSEGKKDFVCDYCFKVFENEFALSTHKVYHRTVGFYGCLYCNRKFNTLTVFKKHKNHHFSQLNVDNPTKCEHCDETFVAFREFIYHMRDVHGDDKEWTVLPKESIEEKCHICNKIFFNLHKHLAYHEENRCKKCSEYFYSQIEYDNHLCAIESEEEVDEKNESDLRPKYEECAFCFKPTTKKNSQRLHDHIHKVSGSISCRFCPLKFKTIDAFNIHAFSHRSRKYDKKPIKCRQCGEKFVRYGPFIRHMRAVHKSKQKLHYRAMVRPEPCVVCGDLFPNLHNHYRAHLQNQCQQCRKYFTSCKVFSQHECDKEDSNPSKVFTCDENLLALINSYTPKDEKDDEKFYGHSDDEDEMAVEPNVPHNDYMTQDEESQNSTDMSIHQMVHAPIISDVLSLYKQKEEESNVVDLVDDNSLDGEDIVNIITIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01146664;
90% Identity: iTF_01148259;
80% Identity: -