Phel005914.1
Basic Information
- Insect
- Papilio helenus
- Gene Symbol
- -
- Assembly
- GCA_026546675.1
- Location
- JAOCNA010000029.1:3089493-3092354[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-11 6.1e-08 33.5 0.0 4 35 49 81 46 88 0.92
Sequence Information
- Coding Sequence
- ATGAATGTGTTATACAATCAGTTACAGTCCAAGAATAAAGCTAAACTGCTCGAGAATTCGCATGCCTGGCTCGGAGCGTCTACATCTTCGATTGCAGAATTCCACGGTACTCTGAAGTCGAAAGCACCCACCTGGACGCAAAGCCAACTGCAAGAAGCTATACAAGCAGTCGTCAACCAAAGAATGCGTTTCACGCAAGCGGCAACACGTTACGGAATACCGAAAGGGACTTTGTACGATAACATTTTAGGCAAATCGAGACGAATGGCGGTGCTAGATGAAGCTGGCTTAACAGCGAATGAAGAAAAGGATGTTTTAGACTTTTGTTGCGAAACCAGCGCCTCACCTTACAATAGGAGAACTAAAAAGTCGCTCCCTGAAGTATTATCATTTGTGGAGAAATTGAAAAGAAAGAGAGACCCTGGTTTCAAATTTATTGGTCTTACTGGTTTTAGATGGTGGTGGGCGTTCTGTAAGAAGTACACTATTGTGTCATTGTATTACGAAGGTACACCAAAAGCTAAACATTCGAAAACATGCTCAGACAATAATTCCGATGACGACTCTTTGGACGATTTGAAGTTAAATAGAAATGTACAGTAA
- Protein Sequence
- MNVLYNQLQSKNKAKLLENSHAWLGASTSSIAEFHGTLKSKAPTWTQSQLQEAIQAVVNQRMRFTQAATRYGIPKGTLYDNILGKSRRMAVLDEAGLTANEEKDVLDFCCETSASPYNRRTKKSLPEVLSFVEKLKRKRDPGFKFIGLTGFRWWWAFCKKYTIVSLYYEGTPKAKHSKTCSDNNSDDDSLDDLKLNRNVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00025190;
- 90% Identity
- iTF_01145222; iTF_01138890;
- 80% Identity
- -