Basic Information

Insect: Papilio glaucus
Gene Symbol: stc
Assembly: None
Location: scaffold:19392-30333[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 1.6e+04 -4.2 1.6 15 19 469 473 468 473 0.81

2 15 0.12 9.2e+02 -0.2 0.8 4 10 503 509 501 509 0.91

3 15 3.5e-05 0.27 11.1 18.1 4 19 517 532 515 532 0.93

4 15 3.2e-08 0.00025 20.8 13.9 1 19 568 586 568 586 0.98

5 15 0.9 7e+03 -3.0 0.3 8 11 591 594 590 594 0.86

6 15 1.1e-05 0.085 12.7 13.1 1 19 627 645 627 645 0.99

7 15 2.2e-07 0.0017 18.1 13.8 1 19 686 708 686 708 0.88

8 15 2 1.6e+04 -5.2 2.2 6 10 738 742 738 742 0.94

9 15 0.014 1.1e+02 2.7 7.3 1 11 748 758 748 759 0.93

10 15 0.04 3.1e+02 1.3 0.3 4 10 763 769 762 770 0.93

11 15 6.4e-06 0.05 13.4 13.5 3 19 777 793 775 793 0.92

12 15 1.1 8.4e+03 -3.3 1.3 7 11 829 833 829 834 0.84

13 15 0.00046 3.6 7.5 9.4 10 18 840 848 837 849 0.92

14 15 1.1e-08 8.2e-05 22.3 11.9 1 16 882 897 882 905 0.90

15 15 0.26 2.1e+03 -1.3 0.4 7 12 919 924 919 924 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	1.6e+04	-4.2	1.6	15	19	469	473	468	473	0.81
2	15	0.12	9.2e+02	-0.2	0.8	4	10	503	509	501	509	0.91
3	15	3.5e-05	0.27	11.1	18.1	4	19	517	532	515	532	0.93
4	15	3.2e-08	0.00025	20.8	13.9	1	19	568	586	568	586	0.98
5	15	0.9	7e+03	-3.0	0.3	8	11	591	594	590	594	0.86
6	15	1.1e-05	0.085	12.7	13.1	1	19	627	645	627	645	0.99
7	15	2.2e-07	0.0017	18.1	13.8	1	19	686	708	686	708	0.88
8	15	2	1.6e+04	-5.2	2.2	6	10	738	742	738	742	0.94
9	15	0.014	1.1e+02	2.7	7.3	1	11	748	758	748	759	0.93
10	15	0.04	3.1e+02	1.3	0.3	4	10	763	769	762	770	0.93
11	15	6.4e-06	0.05	13.4	13.5	3	19	777	793	775	793	0.92
12	15	1.1	8.4e+03	-3.3	1.3	7	11	829	833	829	834	0.84
13	15	0.00046	3.6	7.5	9.4	10	18	840	848	837	849	0.92
14	15	1.1e-08	8.2e-05	22.3	11.9	1	16	882	897	882	905	0.90
15	15	0.26	2.1e+03	-1.3	0.4	7	12	919	924	919	924	0.84

Sequence Information

Coding Sequence: ATGTCCCAGTGGAATAATTCCTACGGATATAACAACCAGTTCCAAGTGCCACCCAATTCGTGGAATAGAGATTTAAATGGGCAATATGTAAATCAAGCATATTATGATAACAGACAATATGAGTCAAGTAACCAGTATGTAAGTTTTGACGAATTTTTGACACGAATGCAGGGTAATGGTGTTCCACAAAATAATGCTACTAATTACAATAATGGACAATACCAAGCCTACCCAACTAACCAATACAATTATCAAAATATACCATCACAAAATCCACAAATAGAATTCAATTATGGACCTGACACCTCCAGTGCAAGTAATAGTATGGACACTTATTCAGCTAATGTTCAAAATCAATACAACTCATCTTTACCTGAGTTCAGTACTTATTCTAATGAAGTTGTAATGAAATCTAAATTAACACCGACTGCAACAGAATTTGTGCCAAAAAGTTCTATGAATGTACCATCCACTTCTCAAAACACCTCTCAAGAATCTTCAAATACACATAATGGTGAAAGTGATAACAGAAGCAGTAACACTAAATCACCAGAAAGCAATTGGAGAGATAGACCAAGCAATAGTGACACAATGAACTCACAAATTGATATGAACAATTTTAGCCGATATCAAAAAAATTATAAAAACACAGAAGGTAATCGTAATCGGGAGTCTAATGGTCGATATGAAAATAAACGTAATAATGAGTCTAACAATGAATCAAATGGGCGCCACCGTAATGGTCATAATGCTAATAGTAATAGTTTTCAATCAAACCAACAAAATAAAGATTCTATCCAAAATAAACAATCAGATAACCAAACTAATGAATCCTTTACTCATCAAAATGACCGAAATTACGAAAGTGGAAACCGAAATGAAACAAAAAGACATACAAATGAAAACAATCCAGCAAAGTCAAATTCAAAATCAAAAAATAAAGATGCGGAAGCAGGTCGAACCTTTTATAACAGCTCTATAAATAAGAGCAGTCAAGATGTTAGACATGGAAGAGGGGAAAGTTCTGGAAGGAATCGAAACTGGATTGGCAGTCAACGCCTTCGAACAACAGATCGTAACTATGTTGAAGATGAGCAGTATGCTAATACATATATGCACTATAAAGATGATAGGCAAGAACGGGTAGTTAGTAAAAGTGAAAAAACAGCAACTCCTGTTAAAGTAAGGAATAAGACAGCTAATGTCTCTGGAGGTAACACAGCTATGACCCAACGTGAGCGTCTCACTGATCAACTAGATAAGGGCACCTTAGAGTGTCTAGTGTGCTGTGAAAGGGTCAAACAAACAGACTCTGTTTGGTGGTGCACAAATTGTTACCATGTTTTACACCTAAGATGTATTAGAAAATGGGCCATGAGCAGTCTAGTAGAAGGCAAATGGAGATGTCCAGCGTGTCAAAACACAAACGACGATATACCAACAGAGTACCGTTGCATGTGCGGTGCTATCAAATCACCGGAGTACTCTCGAGGTGCAGTCAGCGCGCACACGTGTGGTAAATCGTGCCGTCGACCGAGGAACTGCCCTCATCCTTGCACTTTGCTTTGCCATCCTGGTCCCTGTCCACCTTGCCAAGCAACTATTAGCAAACAATGCGGTTGCGGAGCGGAAACTCGTTCGGTGCAGTGCAGCAGCAAGCTGGCGCAGCTGTGCGGGCGCGAGTGCCGCCGCAAGCTGGCCTGCGGTGTGCACGAGTGCCAACGTGAATGCCATGAGGGACCCTGTGATGAATGCTCGGAAATTGTCACACAAGTGTGCCATTGTCCTGCGGCGAAGACGCGTTCTGTGCCGTGTACATCGGAGACGAGCGAAGAACGTGCGTGGTCGTGCGGCGCAGCGTGCGCGCGCGTACTTTCCTGCGGCGCGCACGTGTGCCGGCGCGTCTGCCACACGCCACCCTGCGCGCCCTGCCCGCTGCGACCTGACAACGTGCGCTCATGCCCCTGCGGCAACACAAAGATTGAAAAGGATCAACGTAAGTCCTGCACCGATCCAATACCTCTGTGCGGGAACATCTGTGCCAAGCCGTTACCCTGCGGTCCAGAAGGAGACAAACACTTCTGTAAACAATTGTGTCATGAAGGTCCATGCCCCACTTGCCCCGACAAGACGCTGCTGCCGTGCCGCTGCGGCCACTCCAGCCGCGAGGTGCCGTGCTCCGACCTCCCGGAGATGCTCAATAATGTCTTCTGTCAGAAGAAATGTAACAAGAAACTATCGTGCGGCCGTCATCGTTGCCGCACGGCATGCTGCGCAGCGCAGTCCCACCGCTGCGCCGTGGTGTGCGGCCGCACGCTCTCATGCCAGCTGCATCGCTGCGAGGACTTTTGCCACACGGGCCACTGCGCGCCCTGCCCGCGTGTCAGTTTCGAAGAACTCCACTGTGAGTGTGGCACGGAAGTTCTGTTACCACCAATCCGTTGTGGTACTCGACCACCGGTATGCACTGCCCCGTGTCGGCGCGAGCGGCCCTGCCACCACCCGCCGCACCACTCCTGCCACACGGGAGACTGCCCTCCCTGCGTGGTTCTCACCACTAAAATGTGTCACGGAAAGCATGAGGTAAAACACTACAATAAATTCTATTACATAAATATGTGTAGACTACACATGGTTAAACGATGCGGCAAACACACGTGTGCCAAGACCTGTCATAAAGGGCCCTGCGATACTGACAAATGTAAGCAAGCTTGCACCGAGAAGCGGCCGAGCTGCGGACACCCACGCTCCACCGAGCGACCGTGCCACGAGAACGCAAGAGATTACGCCAAAATGCTGAGTGCGCTGGCAGCGACGAAAATGCAAGAGGGAGGCTCCATGGACTTGTCTGAAGTGCAGCGGCCTAGTGCTATGTTAAAGACTTTGGAGTGCGACGATGAATGCCGCATGGAGGCGCGCAGCCGGCAGCTGGCGCTGGCGTTGCAGATCCGCAACCCGGACGTGTCCGCCAAGCTAGCGCCGCGCTACAGCGAGCACGTGCGTTCCACCGCTGTGCGGGAGCCCGCCTTCGCCCAGAACGTGCACGACTGCCTCACCGAGCTCGTGCAGCGTGCTAAAAAGTCGAAGCAGAAGACGCGCGCGCACTCGTTCCCGTCCATGAACCGACAAAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTCGCCTACGATGCCGAGCCCAACAGGAACGTCGTCGCCACCGCCGACAGGGAAAAGTCGTGGTTGCCAGCAATGAGCGTGCTGGAGGTGCTAGCACGCGAGGCGGGCAAGCGGCGCGTGCCGGGGCCCGTGTTGCGCGCGCCCGCTGCGCCTGCGCCCGCACCAACACTCGCCACGCCCACCACATCCGCCAGCAGGAGTACCGGCGCCTGGGCAACGCTGACATCGACCAACGCGTGGGCGGCCCGCAGCCAGCCCCGCGCTGCCGAGCCCAAGATAGACTACTTCGACAATCCGCCAGAAAACTAG
Protein Sequence: MSQWNNSYGYNNQFQVPPNSWNRDLNGQYVNQAYYDNRQYESSNQYVSFDEFLTRMQGNGVPQNNATNYNNGQYQAYPTNQYNYQNIPSQNPQIEFNYGPDTSSASNSMDTYSANVQNQYNSSLPEFSTYSNEVVMKSKLTPTATEFVPKSSMNVPSTSQNTSQESSNTHNGESDNRSSNTKSPESNWRDRPSNSDTMNSQIDMNNFSRYQKNYKNTEGNRNRESNGRYENKRNNESNNESNGRHRNGHNANSNSFQSNQQNKDSIQNKQSDNQTNESFTHQNDRNYESGNRNETKRHTNENNPAKSNSKSKNKDAEAGRTFYNSSINKSSQDVRHGRGESSGRNRNWIGSQRLRTTDRNYVEDEQYANTYMHYKDDRQERVVSKSEKTATPVKVRNKTANVSGGNTAMTQRERLTDQLDKGTLECLVCCERVKQTDSVWWCTNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNDDIPTEYRCMCGAIKSPEYSRGAVSAHTCGKSCRRPRNCPHPCTLLCHPGPCPPCQATISKQCGCGAETRSVQCSSKLAQLCGRECRRKLACGVHECQRECHEGPCDECSEIVTQVCHCPAAKTRSVPCTSETSEERAWSCGAACARVLSCGAHVCRRVCHTPPCAPCPLRPDNVRSCPCGNTKIEKDQRKSCTDPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGPCPTCPDKTLLPCRCGHSSREVPCSDLPEMLNNVFCQKKCNKKLSCGRHRCRTACCAAQSHRCAVVCGRTLSCQLHRCEDFCHTGHCAPCPRVSFEELHCECGTEVLLPPIRCGTRPPVCTAPCRRERPCHHPPHHSCHTGDCPPCVVLTTKMCHGKHEVKHYNKFYYINMCRLHMVKRCGKHTCAKTCHKGPCDTDKCKQACTEKRPSCGHPRSTERPCHENARDYAKMLSALAATKMQEGGSMDLSEVQRPSAMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRSTAVREPAFAQNVHDCLTELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAPAPAPTLATPTTSASRSTGAWATLTSTNAWAARSQPRAAEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01142814;
90% Identity: iTF_01142099;
80% Identity: -