Basic Information

Insect: Papilio elwesi
Gene Symbol: stc
Assembly: GCA_029641285.1
Location: CM056345.1:9925633-9934792[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 2.5e+04 -4.2 1.6 15 19 415 419 414 419 0.81

2 16 0.12 1.4e+03 -0.2 0.8 4 10 449 455 447 455 0.91

3 16 3.4e-05 0.43 11.1 18.1 4 19 463 478 461 478 0.93

4 16 3.1e-08 0.00039 20.8 13.9 1 19 514 532 514 532 0.98

5 16 0.88 1.1e+04 -3.0 0.3 8 11 537 540 536 540 0.86

6 16 1.1e-05 0.13 12.7 13.1 1 19 573 591 573 591 0.99

7 16 2.2e-07 0.0027 18.2 13.8 1 19 632 654 632 654 0.88

8 16 2 2.5e+04 -5.2 2.2 6 10 684 688 684 688 0.94

9 16 0.014 1.7e+02 2.8 7.3 1 11 694 704 694 705 0.93

10 16 0.04 4.9e+02 1.3 0.3 4 10 709 715 708 716 0.93

11 16 6.3e-06 0.078 13.5 13.5 3 19 723 739 721 739 0.92

12 16 1.1 1.3e+04 -3.2 1.3 7 11 775 779 775 780 0.84

13 16 0.00045 5.7 7.5 9.4 10 18 786 794 783 795 0.92

14 16 1e-08 0.00013 22.4 11.9 1 16 831 846 831 854 0.90

15 16 0.0045 56 4.3 9.9 1 19 861 884 861 884 0.87

16 16 0.22 2.7e+03 -1.0 0.4 7 12 899 904 893 904 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	2.5e+04	-4.2	1.6	15	19	415	419	414	419	0.81
2	16	0.12	1.4e+03	-0.2	0.8	4	10	449	455	447	455	0.91
3	16	3.4e-05	0.43	11.1	18.1	4	19	463	478	461	478	0.93
4	16	3.1e-08	0.00039	20.8	13.9	1	19	514	532	514	532	0.98
5	16	0.88	1.1e+04	-3.0	0.3	8	11	537	540	536	540	0.86
6	16	1.1e-05	0.13	12.7	13.1	1	19	573	591	573	591	0.99
7	16	2.2e-07	0.0027	18.2	13.8	1	19	632	654	632	654	0.88
8	16	2	2.5e+04	-5.2	2.2	6	10	684	688	684	688	0.94
9	16	0.014	1.7e+02	2.8	7.3	1	11	694	704	694	705	0.93
10	16	0.04	4.9e+02	1.3	0.3	4	10	709	715	708	716	0.93
11	16	6.3e-06	0.078	13.5	13.5	3	19	723	739	721	739	0.92
12	16	1.1	1.3e+04	-3.2	1.3	7	11	775	779	775	780	0.84
13	16	0.00045	5.7	7.5	9.4	10	18	786	794	783	795	0.92
14	16	1e-08	0.00013	22.4	11.9	1	16	831	846	831	854	0.90
15	16	0.0045	56	4.3	9.9	1	19	861	884	861	884	0.87
16	16	0.22	2.7e+03	-1.0	0.4	7	12	899	904	893	904	0.84

Sequence Information

Coding Sequence: ATGCAGGGTAATGGTGTTCCACAAAATAATGCTACTAATTACAATAATGTACAATACCAAGCCTACCCAACTAACCAAtacaattatcaaaatatacCAGCACAAAATCCACAAATGGAATTCAGTTATGGACCCGATACCTCCAATGCAAGTAATAGTATGGACACTTATTCAGCTAATGTTCAAAATCAATACAACCCACCTTTACCTGAGTTCAGTACTTATTCTAATGAGGTTGTTATGAAATCTAAATTAACACCGACTGCAACAGAATTTGTGCCAAAAAGTTCTATGAATGTAGTATCCACTTCTCAAAACACCTCACAAGAATCTTCAGGTACACATAATGGTGAAAATGCTAACAGGAGCAGTAACACTAAATCTCCAGAAAGCAATTGGAGAGAAAGACCAAGCAATAGTGACACAGTGAACTCACAAGTTGATACGAACAATTTTAATcgatatcaaaaaaattataaaaacatagaaGGTAATCGTAATCGTGAGTCTAATGGTCGATATGAAAATAAACGTAATAATGAATCCAACAATGAATCAAATGGGCGCCACCGTAATGGTCATAATGCTAATAGTAATGGTTTTCAatcaaatcaacaaaataaagatTCTGCTATCCAAAATAAACAATCAGATAACCAAACTAGTGAATCCCTTACTCATCAAAATGACCGAAATTACGAAAGTGGAAACCGAaacgaaacaaaaagaaatacaaatgaaaacaaTCCAGCAAAGTCAAATTCTAAATCAAAGAATAAAGATGCGGAAGCAGGTCGAACCTTTTATAACAGCTCTATAAATAAGAGCAGTCAAGATGTTAGACATGGAAGAGGGGAAAGTTCTGCAAGGAATCGAAACTGGGTTGGCAGTCAACGCCTCCGGACAACAGATCGTAACTATGTTGAAGATGAGCAATATgctaatacatatatacactgtAAAGATGATAGGCCAGAACGGATAGTTAGTAAAAGCGAAAAAACAGCAACTCctgtaaaaggaaaaaataaagcaGCAAATGTCTCTGGAGGCAACACAGCTATGACCCAACGTGAACGTCTCACTGATCAACTAGATAAGGGCAACTTAGAATGTCTAGTGTGCTGTGAAAGGGTCAAACAAACAGACTCTGTTTGGTGGTGCAGAAATTGTTACCATGTTTTACACCTGAGATGTATTAGAAAATGGGCCATGAGCAGTCTAGTAGAAGGCAAATGGAGATGCCCAGCATGTCAAAACACAAACGACGATATACCAACAGAGTACCGTTGCATGTGCGGTGCTATCAAATCACCAGAGTATTCTCGAGGCGCAGTCAGTGCACACACGTGTGGTAAATCGTGCCGTCGACCGAGGAACTGTCCTCATCCATGCACTTTGCTTTGCCATCCTGGTCCCTGTCCACCTTGCCAAGCAACTATTAACAAACAATGCGGTTGCGGAGCGGAAACTCGTTCGGTGATGTGCAGCAGCAAGCTGGCGCAGCTATGCGGGCGCGAGTGCCGCCGCAAGCTGGCCTGCGGTGTGCACGAGTGCCAACGTGAATGCCATGAGGGACCCTGTGATGAATGCTCGGAAATTGTCACACAAGTGTGCCATTGTCCCGCGGCGAAGACGCGTTCTGTCCCCTGCTCGTCGGAGACAAGCGAGGAACGTGCGTGGTCGTGCGGCGCAGCGTGCGCGCGCGTTCTGTCTTGCGGCGCGCACGTGTGCCGGCGCGTCTGCCACACGCCGCCCTGCGCGCCCTGCCCACTGCGACCCGACAACGTGCGCTCATGTCCCTGCGGCAACACAAAGATTGAAAAGGATCAACGGAAGTCCTGCACCGATCCAATTCCTCTGTGCGGGAACATCTGTGCCAAGCCGTTACCCTGCGGTCCTGAAGGAGACAAACACTTCTGTAAACAATTGTGTCATGAGGgtCCGTGCCCCACTTGTCCCGACAAGACGCTGCTGCCGTGCCGCTGCGGGCACTCCAGCCGCGAGGTGCCGTGCTCCGACCTCCCGGAGATGCTCAACAATGTCTTCTGTCAGAAGAAATGTAACaagAAACTATCTTGCGGCCGTCATCGTTGCCGCACGGCGTGCTGCGCGGCGCAGTCGCACCGCTGCGCCGTGGTGTGTGGCCGCACGCTCTCCTGCCAGCTGCACCGCTGTGAGGACTTCTGCCACACTGGTCACTGCGCGCCCTGCCCGCGTGTCAGTTTTGAAGAACTCCACTGTGAGTGTGGCACGGAAGTTCTGTTACCACCAATCCGTTGTGGTACTCGACCACCAGTGTGCACTGCTCCATGCCGCCGCGAGCGGCCCTGCCACCACCCGCCGCACCACTCCTGCCACACGGGAGACTGTCCCCCATGTGTGGTGCTCACCACTAAAATGTGCCACGGACAGCATGAGGAGCGGAAGACAATACCGTGCAGTCAAGAGGAGTTCTCGTGCGGACTGCCGTGTGGCAAGCCCTTGCCGTGCGGCAAACACACGTGTGCCAAGACTTGCCATAAAGGGCCCTGCGATACTGACaaATGTAAGCAGGCGTGTGCTGAGAAGCGGCCGAGCTGCGGACACCCGTGCGCGGCGGCGTGCCATGTGGACAACGGCGGTGCGTGCCCCAGCGCCGCGCCCTGCCGCCGGCTCGTGCGCGCCACCTGCGCCTGCGGGCGACGCTCCACCGAGCGACCGTGCCACGAGAACGCAAGAGATTACGCCAAAATGGTGAGTGCGCTGGCAGCGACCAAACTGCAAGAGGGAGGCTCCATGGACTTGTCTGAAGTGCAGCGGCCTAGTGCTATGTTAAAGACTTTGGAGTGCGACGACGAATGCCGCATGGAGGCACGCAGCCGGCAGCTGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTATCCGCCAAGCTAGCGCCGCGCTATAGTGAGCACGTGCGCTCCACCGCCGTGAGGGAGCCCGCCTTCGCCCAAAACGTGCACGACTGCCTCACCGAGCTCGTGCAGCGTGCCAAAAAGTCGAAGCAGAAGACGCGCGCGCACTCGTTCCCGTCCATGAACCGACAAAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTCGCCTACGACGCCGAGCCCAACAGGAACGTCGTCGCCACCGCCGACAGGGAGAAGTCGTGGTTGCCAGCAATGAGCGTGCTGGAGGTGCTAGCACGCGAGGCGGGCAAGCGGCGTGTGCCGGGGCCCGTCTTGCGCGCGCCCGCTGCGCCTGCGCCCGCACCAACACTCGCCACGCCCACCACATCCGCTAGCAGGAGCACCGGCGGCTGGGCTACGCTGACGTCGACCAACGCGTGGGCGGCGCGCAGCCAGCCCCGCGCTGCCGAGCCCAAGATAGACTACTTCGACAATCCGCCCGAAAACTAG
Protein Sequence: MQGNGVPQNNATNYNNVQYQAYPTNQYNYQNIPAQNPQMEFSYGPDTSNASNSMDTYSANVQNQYNPPLPEFSTYSNEVVMKSKLTPTATEFVPKSSMNVVSTSQNTSQESSGTHNGENANRSSNTKSPESNWRERPSNSDTVNSQVDTNNFNRYQKNYKNIEGNRNRESNGRYENKRNNESNNESNGRHRNGHNANSNGFQSNQQNKDSAIQNKQSDNQTSESLTHQNDRNYESGNRNETKRNTNENNPAKSNSKSKNKDAEAGRTFYNSSINKSSQDVRHGRGESSARNRNWVGSQRLRTTDRNYVEDEQYANTYIHCKDDRPERIVSKSEKTATPVKGKNKAANVSGGNTAMTQRERLTDQLDKGNLECLVCCERVKQTDSVWWCRNCYHVLHLRCIRKWAMSSLVEGKWRCPACQNTNDDIPTEYRCMCGAIKSPEYSRGAVSAHTCGKSCRRPRNCPHPCTLLCHPGPCPPCQATINKQCGCGAETRSVMCSSKLAQLCGRECRRKLACGVHECQRECHEGPCDECSEIVTQVCHCPAAKTRSVPCSSETSEERAWSCGAACARVLSCGAHVCRRVCHTPPCAPCPLRPDNVRSCPCGNTKIEKDQRKSCTDPIPLCGNICAKPLPCGPEGDKHFCKQLCHEGPCPTCPDKTLLPCRCGHSSREVPCSDLPEMLNNVFCQKKCNKKLSCGRHRCRTACCAAQSHRCAVVCGRTLSCQLHRCEDFCHTGHCAPCPRVSFEELHCECGTEVLLPPIRCGTRPPVCTAPCRRERPCHHPPHHSCHTGDCPPCVVLTTKMCHGQHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCAKTCHKGPCDTDKCKQACAEKRPSCGHPCAAACHVDNGGACPSAAPCRRLVRATCACGRRSTERPCHENARDYAKMVSALAATKLQEGGSMDLSEVQRPSAMLKTLECDDECRMEARSRQLALALQIRNPDVSAKLAPRYSEHVRSTAVREPAFAQNVHDCLTELVQRAKKSKQKTRAHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPGPVLRAPAAPAPAPTLATPTTSASRSTGGWATLTSTNAWAARSQPRAAEPKIDYFDNPPEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01142814;
90% Identity: iTF_01143542;
80% Identity: -