Pgig003723.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio gigon
Gene Symbol
Hr39
Assembly
GCA_027563995.1
Location
JAODUI010000023.1:7320493-7330142[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.59 3e+03 -2.6 0.3 79 113 112 146 52 210 0.50
2 4 4 2e+04 -7.8 9.0 122 161 267 306 124 341 0.53
3 4 9.4e-08 0.00047 19.8 0.1 1 21 431 451 431 473 0.86
4 4 2.5e-60 1.2e-56 193.0 0.0 202 384 545 722 459 733 0.84

Sequence Information

Coding Sequence
ATGAACACGACGATGTCGAGCGATGGAGACTCGGTGAAGGTGGAGGGGGGCCATGTGTCCGTCACCACTATCAGCATGTCGGGCCCAGAGACCAGCGATGGTCAGTTCTCGTACAGTTCCAGTGGAGTGCGCATCAGCGTGTCCTCGGACCCTCACGACGAAGACTCGACTGATGCGGAGATCTCCAAGATCGATTTCACGCAACATCAATATGAGGTCAACATGCGTAATAAAAAGAAGAGATCGTCCAGCGGCGCGCAGTGCGAGGCCAACGAGCGCGAGCGGCCCATGTCGTGGGAAGGCGAGCTGTCGGACTCCGAGATGGTCATAGACACGGTAAACAATGATGAGAACAGCAGTTCGATAGACATGCAGTCATCGCGCGACTCTATAGACACGCTTCGCAACGTCACCATCAAAGCGGAGCCCCTCAAGACGGAAGCCTTCCAGAGCTACGACGACCAGCGCGTGCTGGACTTGAAGTACTCCACGCCGTTACAGCCTCATCAGCGCAGTCTTAGTATGAATAGGATATCAGTACTTACCGACAGCGCGTCACTGTGTCTACCGCGGCGGCCGTCGTCCCCCGCGCACAGCGCCAAGTCCCTGGTCCTCAGCGAGCAGACCGCGCTGCCGCTCATGACGCCCGCTGTTGACGAAGCACAGAACCTCACTATAAAGAAGGAGACACAGCTATGGGAATTGAAGTGCGAAGGCGGTTGTGGCATGGATAAGCTGGTGGGGTTACACGGGTCGCCGCTGCTGGGCCGGCTGCCGCGCGTGCAGTCCAGCGCCAGCACCGACTCCGCCGTGCATTCTATGTACACGCACAGTGTGTACAGCAGTCCGTCGGCGAGCCCGCGGCCCGCGCGCCACTACACCCCGTCGCTGTCGCGCAACAACAGCGACGCCTCGCACTCCTCCTGCTACTCCTACAGCTCCGAGTTCTCGCCCACGCACTCGCCAATACAGCAGAGCCGGCAGCCGCACGTGGTGTACCGGGAACACGATGACGAGGACGCCGCCGACGACCGCCTGCACCAGCACCAGGGCATCAGCAGGCAGCAGCTCATCAACAGTCCGTGCCCGATCTGCGGAGATAAAATCAGCGGGTTCCACTACGGTATCTTCTCGTGCGAGTCGTGCAAAGGCTTCTTCAAGCGCACCGTGCAGAACCGGAAGAACTACATGTGCCTGCGCGGCGGCAACTGCCCGGTCACTGTCGCCACGCGCAAGAAGTGCCCCGCCTGCCGCTTCGACAAGTGCCTCGGCTGTGGGATGAAGCTTGAAGCGATCCGCGAGGACCGCACGCGCGGCGGCCGCTCCACCTACCAGTGCTCGTACTCGCTGTCGGGCGCCGCCTCCACGGGCTCGCTGCTGTCCGCGCACGCCGCGCCCGCCATGCGCCACGCCAGCAGTCTCAACATCGTAAACGGTCCTGGATCTTACAGCAGTCGAGGGGAAGCGAGCAACAGTCGATTGACGCCAGAAATTCCTTCATTATTACAGGAGATAATGGACGTCGAGCACCTATGGCAGTACAACGAGTCGGAGCTGAGTCGGCTGGGCAAGTCCGGGGGCAGCGGGGCCAGCGCGGGCGCCAACCCGCTGCTGGCGGCCAGCGGCATCACCCCGCACACCTCCAGCGCGGACCTACTGGCCGACCTCTGCCACATCGCCGACCACCGCCTCTACAAGATCGTCAAGTGGTGCAAGAGTCTGCCGCTATTTAAGAACATATCGATCGACGACCAGATCTGTCTGCTGATCAACAGCTGGTGCGAGTTGCTGGTGCTGTCGTGCTGCTACCGTGGTGTGGGCACGCCCGGCGAGGTGCGCGTCGGCGGTGGTCGTGGTCTCACTCTGCACCAAAGTGCCAAGTTCGGGTTAACGCCGTGCATAGAGCGCATGTTGAGCTTCACCGACCACCTGCGGCGGCTGCGGGTGGACCGCTACGAGTACGTCGCGCTCAAAGTCATCGTACTACTCACTTCTGACGCGCCCGAGCTGCGCGAGGCGGAGAAGGTGCGCGCGTCGCAAGAGAAGGCGCTGGCCGCGCTGCAGGCGTACACGGCCGCGCACTCGCCCGACGCGCCTGCCAAGTTCGGCGAGCTGCTGCTGCGCATACCGGAGCTGCAGCGAACCTGCCAGAGTTTCGAAGGTGTGATGGGTCAGCAGGTCCACGTGACGGAATACGACTGGCTAAGAGTGAACAGGCTTTACAAATGCCAAGCATGTGATTCGGAGACAAGAGACAAGGTGAAAGTAAAGTTCGGCGAACAAGCTTGA
Protein Sequence
MNTTMSSDGDSVKVEGGHVSVTTISMSGPETSDGQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSSSGAQCEANERERPMSWEGELSDSEMVIDTVNNDENSSSIDMQSSRDSIDTLRNVTIKAEPLKTEAFQSYDDQRVLDLKYSTPLQPHQRSLSMNRISVLTDSASLCLPRRPSSPAHSAKSLVLSEQTALPLMTPAVDEAQNLTIKKETQLWELKCEGGCGMDKLVGLHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRPARHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQQSRQPHVVYREHDDEDAADDRLHQHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLSAHAAPAMRHASSLNIVNGPGSYSSRGEASNSRLTPEIPSLLQEIMDVEHLWQYNESELSRLGKSGGSGASAGANPLLAASGITPHTSSADLLADLCHIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVGTPGEVRVGGGRGLTLHQSAKFGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDAPAKFGELLLRIPELQRTCQSFEGVMGQQVHVTEYDWLRVNRLYKCQACDSETRDKVKVKFGEQA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00958006;
90% Identity
iTF_01139641;
80% Identity
iTF_01142467;