Pgig005587.2
Basic Information
- Insect
- Papilio gigon
- Gene Symbol
- JARID2
- Assembly
- GCA_027563995.1
- Location
- JAODUI010000025.1:4546720-4554716[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-18 4.9e-15 55.8 0.0 7 89 842 921 837 921 0.91 2 2 8 1.1e+04 -2.9 0.0 60 85 1007 1030 994 1031 0.63
Sequence Information
- Coding Sequence
- ATGAAAAGAAGGAAAGTTCAAGCTCAACGAAAGTTTGCTCAAGGTGTGTATATTCCTCCAAGTACACAAACTACAAATGTTGAAAAAGTAACAAATCCTTCAATACAAAAGGATAATGAGATTAGAAGCAACATATTTCACAGTAGCACGTCGGCTAAAAGTCTTCTTGACATCATCAGTTTCCAAAATCTCCATAAACATAGAGAACCTATTGTCTTATTGGAACGATTAAGACATTACCCTGAACAAATTCAAGCATCATCATCTGAAGCATCACAACAATATAATATCAGTCAAATGAAAAAAGTGACTACATCACTTAAGCATAACATGTGCCTTAGGTCTAAGAAAAAGTTAGCCAAATTTGTTAAAAGGCTAAGAAACAAAAATATATCTATTATAAAGAACAAAAGGCAACCTAAGGTTACCAAAGACACATCAAGTTTGGATTCAATTGATTCATGCAACGAAGATGACAAACCTTTAATGTATCTTGCCAAAGAGGAGAAAAATAATAAATTAGTAAACAAGACGTTAAATACTACCATTAAAGATAAAGAAAAGAAAGTAAGTTTTGACATTGGCCCCCATGGAGCATCTGGTGCGTACGAACCCCAACGAAATAACAGGCAACAATATGATTCGCGTCATCACGTCTCTGCAAGACACAAAGATGGTGTAAGAAGACGTTCAATAGTTCACACTCGGTCACACGGAAGGACTACAGTTGATGCCCGTGAATTTGAAAATGAAATTCCCCTGGGACCTGGTCGCCCACATCGTAGCCGATCCATGCTTAAAACAGATAGAGTGAAAAGACAGCGATTGCACACACGCTCGAGTCGACGGTCGGGGACTGATGCCTGCGAATCAGACAGTGGAGAGCTGCTGGAACATGACGAATCGGGCAGCAGTAGCTCACCACAGAAGATGGTTTTAGATGAAACAAAAAAGAGTGGTTCACGAATCCAGCGGCTCACCTCTCGTTTTATGGATGACGCATCTGAATCAGGACAAGAAGAATTGAAAGTTGAAGAACCTTACGAAAGCCAAGTTCAAAATACAGATTATATCAGGGATTCAGTTGAAAAGGAAAACCCTCAGAAAATTTGCAACCAACCATCAATATCCAGCAAAAAATTAATAGCTACAGTGACTCCGATATCTAACACGAACACCAAGGCATCAACATCTCCTCGTCCTGCTAAAAAAAGACCATCCAATCCAACACTGGAGTCCTTAGTACCACCCGCATCGGGAGTTCAACCTATTATTAAAATTGAATCTCCGGCTACTTCCAGTCTACTCGAAACATCGATGATTAATAACTCTTCATTCAAATCGTCCCAAGTCAACTCTATAGGCGAGGGCCAAGAAACAAAGTCTGAGAATTCTAATTCCAAAATGAAACCTACAACTAGTTCAGAAGACAAATCTCGTCACAGCGAACATAGAATGGTTTCCACTTCTGAAGCACCAGCTGGACCATTAGAAGAACATAAACTGCCAAAAGCTGACAAATATTTAAACGTCCCGTTAAGTTCTAGACGGTTGCGCAACATTCCCGTCGATAAAGTGTCTAAAACAAACCAGGAGAAAAGAAATAATACCAAGAAGCAAATGTCAAACGCAGTAGAGCATTCCGAATCAATTGATAATTCTTCCAAAGTTAAAAACCGTCGTATATATTGTCCATCCAAAAACTACTCAAGTATGAACGACGTTGTCTATGCGGACCCTAAAGATTTGATTGGCAGATGTGAACGATGCGATTATTGTGCGTTCGTCGACAAAGTGCAGTGTGTGTCAAATATGTTTAAAATACAATATTGCCGAAAGATTATACAGTCGAAAATATACGGATTTGACGCTGAAGACGAGGACTCAGTGAAAAGTGGCGACTCATTTATACCAAGACCGAAGAAGCGGCATGGGACAGAAGGAAATATTGAATGTGACATACACACATGCTATTTAATTTATGATAAAGATTCTGATCATGTCGTAGAAGTTAAAAGAACTAGGTATGCCAACCAGGTGACACGAATTGAAAGTGCTAACATTGTACCAAGGACGTTAAACACAAAAATCACTACAGTTACTGCATTTGATAGTTACCAACTTTTGGATGATATAATAAATTTTGTTATATCAAAGAAGTCTAATAACACAGTAGAAACTGCCTCAGATTCTTCTACTGGAACTAAGTCTGGACTGAGTGCTTTTACATTGAACGGAGATCATAATGGTACTGTGGAAAAAAGTTCAGCAATACTTAAGCCAATGCTCAAAGCAAGTCAGACGGATGCACCAATCTTCTATCCTACAGAACAAGAATTCATGGACCCGATTGCTTACTTTAATAAAATTATGCCAATGGCAGCTAAATTCGGGTTATGCAAAGTTGTGGCTCCGAATACTTTTAAACCAAAGTGTATGTTGGATGATGAGGTACGTTTCGAAGTGACGAACCAGTACATATCACGTTTGTACAAGCGCTGGGGACCAGCATCGCGAGAACTGTGCGCCATTAAAGCTTATTTAGCTTCTCAGAGTGTGATCTTCAGTCGACCGCCTTTGCTTGAAGGAGTCGAGGTTAACTTACCGAAGTTATACTACTTAGTGCAAACATGGGGCGGCCTAAAGGAAGTCATTGAAAAGAAACGCTGGACCAAAGTAGCTGAAGAAATGAATCTTGCCAAGACACCAAAAATAGAGGTTAAACTGGATCAAATATATGTCAAATATATTTTGCCTTATGACACAATGACTGATGATGAACGGAAAGATCTGATGAAAGCAGTTGATAAACATTGGAGCAAGAAACACCAGAAAATGCTACAACGTGCTACGAAGCCGTTGTACAGACAGAAGCGTCTCTTAGATGAATCTGAATCATCTGAAGAAGATATTGATGAAGATATTTATGTGTCCGGAGCGCTGGCCGAAGCAGAGGATTGTATAAGCAACGGCAGGCAAATGAATCTTCTTACTTTTAAAAAGGTGGCAAGTAAATGTATGGAAATGTACGTCTCAAATAGTAATCAGAATACTCCGACTGATATAGAACAAATATATTGGAAAATGGTTCTCCTCGCTCAAGATCACATTTGTGTTAATAACGCATCAATCGACACCGGCGAGGAAGGGTATGGTTTCACTAAAGACCAACGCGACTCCTATGGGAAACATCCATGGAATTTAAAGGTACTTAGTCAGAACAGTGGGAATGTTCTTAGATTTTTAGGACCAGTACTGGGTGTGACAGTACCCACTTTGCATCTCGGGATGGTTTTCTCTACCAGCTGTTGGCACAGAGATCCCCACGGTCTACCCTGGATTGAATACATGCATACTGGACCTGGAAAATTTTGGTATGGTATACCCGATGAACAAAGTGACAATTTTCGAAGAGCCGTGGAATTGCTATGCCCGACATCATGTCAAAACAAATCTATTTGGCTTCCATCCGACATCACAATGATCCCACCGGACCTTCTCTTGCAGAACAATGTATCAATGTCCAGAGTAGTCCAAGAGCCGGGACAATTTATTGTTGTTTTCCCGAAAGCATATTCATGTTCTATCGCAACGGGTTACACTGAGTCTGAGAGTGTATATTTTGCAACTAATTCATGGTTGGAAACAATTGATCAAGTGTTTCAAGAAGTACGTGAGAGCTGCGAACCCACAATGTTCTCTCTGGAGCATCTGTTGGTGTCGGCTGCGCGGGACTCGCGAGCGCCCGATGAAGTCCTCAAATTAGTTAATGTGCACCTCGGGAAAGTCATAAGAGAAGAGCTGAGTAACCGCAACGCCCTCGCTGCATACAAAATTCAGAGCCAAAACCCACAACAAACTAAGCATTCTCGCAAGCGGCCCGCGGGCGCCTGGAATGTTCGAGATCAAGACGAATGTGAGATCTGCCAAGCGACCTTGTATCTCTCCAAAGTGCGAGGATTGACAGACAAGAAACGATCAGTATGCCTCCAGCACGCCCTGCAGTTGCTCGACACTGTCAAGAACAAGGAGCGTGACTTGACGTGCGTCGAGCTCGAGTCATTCTTTTCCGATGCGGAATTAGAAAGAATTATGACGAAGATTAACAATCGAATTTAA
- Protein Sequence
- MKRRKVQAQRKFAQGVYIPPSTQTTNVEKVTNPSIQKDNEIRSNIFHSSTSAKSLLDIISFQNLHKHREPIVLLERLRHYPEQIQASSSEASQQYNISQMKKVTTSLKHNMCLRSKKKLAKFVKRLRNKNISIIKNKRQPKVTKDTSSLDSIDSCNEDDKPLMYLAKEEKNNKLVNKTLNTTIKDKEKKVSFDIGPHGASGAYEPQRNNRQQYDSRHHVSARHKDGVRRRSIVHTRSHGRTTVDAREFENEIPLGPGRPHRSRSMLKTDRVKRQRLHTRSSRRSGTDACESDSGELLEHDESGSSSSPQKMVLDETKKSGSRIQRLTSRFMDDASESGQEELKVEEPYESQVQNTDYIRDSVEKENPQKICNQPSISSKKLIATVTPISNTNTKASTSPRPAKKRPSNPTLESLVPPASGVQPIIKIESPATSSLLETSMINNSSFKSSQVNSIGEGQETKSENSNSKMKPTTSSEDKSRHSEHRMVSTSEAPAGPLEEHKLPKADKYLNVPLSSRRLRNIPVDKVSKTNQEKRNNTKKQMSNAVEHSESIDNSSKVKNRRIYCPSKNYSSMNDVVYADPKDLIGRCERCDYCAFVDKVQCVSNMFKIQYCRKIIQSKIYGFDAEDEDSVKSGDSFIPRPKKRHGTEGNIECDIHTCYLIYDKDSDHVVEVKRTRYANQVTRIESANIVPRTLNTKITTVTAFDSYQLLDDIINFVISKKSNNTVETASDSSTGTKSGLSAFTLNGDHNGTVEKSSAILKPMLKASQTDAPIFYPTEQEFMDPIAYFNKIMPMAAKFGLCKVVAPNTFKPKCMLDDEVRFEVTNQYISRLYKRWGPASRELCAIKAYLASQSVIFSRPPLLEGVEVNLPKLYYLVQTWGGLKEVIEKKRWTKVAEEMNLAKTPKIEVKLDQIYVKYILPYDTMTDDERKDLMKAVDKHWSKKHQKMLQRATKPLYRQKRLLDESESSEEDIDEDIYVSGALAEAEDCISNGRQMNLLTFKKVASKCMEMYVSNSNQNTPTDIEQIYWKMVLLAQDHICVNNASIDTGEEGYGFTKDQRDSYGKHPWNLKVLSQNSGNVLRFLGPVLGVTVPTLHLGMVFSTSCWHRDPHGLPWIEYMHTGPGKFWYGIPDEQSDNFRRAVELLCPTSCQNKSIWLPSDITMIPPDLLLQNNVSMSRVVQEPGQFIVVFPKAYSCSIATGYTESESVYFATNSWLETIDQVFQEVRESCEPTMFSLEHLLVSAARDSRAPDEVLKLVNVHLGKVIREELSNRNALAAYKIQSQNPQQTKHSRKRPAGAWNVRDQDECEICQATLYLSKVRGLTDKKRSVCLQHALQLLDTVKNKERDLTCVELESFFSDAELERIMTKINNRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01140020;
- 90% Identity
- -
- 80% Identity
- -