Pdar004497.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio dardanus
Gene Symbol
Jarid2
Assembly
GCA_013186455.1
Location
QDHC01005696.1:66689-78114[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-18 3e-15 56.4 0.0 7 89 819 898 814 898 0.91
2 2 7.3 1.5e+04 -3.5 0.0 61 85 985 1007 976 1008 0.65

Sequence Information

Coding Sequence
ATGAAAAGAAGGAAAGTACAAGCACAACGTAAGTTTGCGCAGGGTGTATGTATTCCTCCGAGCACTCAAAGTACAAATATTGACAAAGTAACAAATCCTACAACACAAAAGGACAATGAGATTAGAAGCAATATATTTCACAGTAGCACATCAGCTAAAGGTCTTCTTGATATCATAAGTTTCCAAAATCTACATAAACATAGAGAACCTATTGTGTTATTAGAGAGACTAAGACATTACCCTGAACAAGTTCAAACATCATCATCTGAAGTGTCtcaacaatataatataagtCAATTGAAAAAAGTAACTACAGCACTTAAACATAACATGTGTCTTAGATCTAAGAAAAAGTTAGCTAAATttgttaaaagattaaaaggtaaaaatatttctataataaagaACAAAAGGCCACCCAAGCTTAACAAAGATGCATCAAGTTTAGAATCAATAGATTCTTGCAATGAAGATGACAAACCTTTAATGTATCTTGCCAaagaggaaaaaaataataaagctgtGAACAACACATCAAGTACTACTGTTAAAGacAAAGAGAAGAAAGTAAGTTTTGACATTGGTCCCCACGAACATGCGGCATCTGATGCTTATGAAACCCAAGTCAAAAGCGGGCAACAGTGTGATCCGCGTTGTCACAACCCTTCAAGACATAAAGATGGAATAAGAAGGCGATCAATAGTTCATACTCGGTCGCATGGCACGAGTTCAGTTGATGTCCGTGATTTTAATCAAGAGATTCCTCTGGCTCCCGGTCGGCCACATCACACTCGATCCATACTTAAAACAGATAGAGTGAAAAGACAGCGCTTGCAACGTTCGAGTCGACGGTCGACGACTGACGCCTGCGAATCAGACAATGGAGAGCTGCACGAAAATGACGAATCTAGCAGCAGTGGCTCACCGCAGAAGATAGTTTTAGATGTAACAAAAAAGAGCTGTTTACGAAGCCAGCAGCCCACCTCCCGCTCTGTAGATGATGTATCTGAATCAGGAcaagaagaaacaaaaattgcACAACCAATTTGTAATAGCAACTCACAAAATAAAgacaatATCAGGAATTCTATTGAAAAGGAAAAACCACAGAAATTGTACAACCAAGCATCAATATCCAGCAAGAAATTAACATCTACTGAATCCTTAATTCAACCTGCATTGGGACTCCAGCctattgttaaaattgaaaCCCCCGCTTCTTCCAGTCTTCTAGaaacggttattattgtaaagtcTTCACCTAAGTCATCACGTGTCAACTCTTGCAGTGTGGGACCACAGTCAAAATCTGACGattCCGATGCCCATAGCAAAGCTACAACCAGTAGCGAGGTGACCTCTCAtcttaatgaatataaaatggcTGCGGCTACTGAAGcCAATGTGGAACCATTAGAGGAACATACTGTTAAACCGCTAAAGCctgacaaatatttaaacgttCCATTAAGTTCTAGACGTTTACGCAACATTCCTTTCGATAAAGTGTCTAAAACAAATCCCGAGAAAAGAggtattataaagaaacaaatatcaaGCACAGGAGAGCATTCCGAATCGATCGACATAACttccaaaattaaaaaccgtCGTATATATTGTCCATCTAAAAACTACTCTAGTATGAACGATGTTGTCTATGCGGACCCTAAAGATTTGGTTGGCCGGTGTGAACGATGTGAATACTGTTCGTTCGTGGACAAAGTGCAGTGTGtatcaaatatgtttaaaatacaatactgtCGAAAGATTATACAGTCCAAAATATATGGCTTTGATGCTGAAGACGACGAATCAGTGAAAAGTGGTGATTCTTTTATACCAAGACCAAAGAAGCGGCATGGGAACGAGCCAAGTAGTGAATGTGATATACAAACATGTTATCTAATTTACGATAAAGATTCTGATCATGTCGTGGAAGTAAAAAGATGTCGGTATGCTAATCAGGTGACAAGAATCGAAAGTGCTAGTATTATTCCAAAGACATTGAATACTAAAATCATGACGGTTACTGCATTTGATAGTGACCAACTTTTGGatgatataataaatttagtaATATCAAAGAAGCCTAACCCtacagtggaaactcactCGGATTCTGCCAATGGAATTAAGTCTGGAATGAGTGCTTTTTCAGTCAACGGAGATCACAATGATACTGAGGAAAGGAGTTCAGCAATACCAAAGCCGATGCTCAGAGCAAGCCAAACGGATGCACCAATCTTTTATCCTACGGAACAAGAATTTGTGgacCCCATTGcttacttcaataaaattatgccATTCGCAGCTAAATTCGGGTTATGTAAAGTTGTGGCTCCGAATACTTTTAAACCAAAGTGTATGTTGGATGATGAAGTGCGCTTTGAAGTGACCAATCAGTACATATCTCGCCTTTACAAGCGTTGGGGGCCTGCATCCAGAGAACTGTGTGCCATCAAAGCTTACTTAGCTTCCCAAAGTGTGATCTTCAGTCGGCCGCCTTTGctTGAAGGGGTCGAGGTGAACTTGCCAAAGTTATACTACTTGGTGCAAACATGGGGCGGTCTAAAAGAAGTTATTGAGAAGAAACGCTGGGCTAAAGTAGCTGAAGAAATGAATCTTACCAAAACGCCAAAAATTGAAGTCAAATTAGatcaaatatatgtaaaatatatattacctTACGACACTATGACGGATgATGAGCGGAAAGACCTTATGAAAGCAGTTGATAAACACTGGAGCAAAAAACATCGAAAAATGCTACAACGTGCTTTGAAACCCTTATATAGACAGAAACGTCTCATAGACGAATCTGAATCATCCGAAGAAGATATTGATGAAGATATTTATGTCTCCGGAGCATTGGCCGAGGCAGAGGACTGTATCAGTAACGGCAGGCAAATGAATCTGCTCACttttaaaaagGTGGCAggtaaatgtatggaaataaacATTCCGCATAGTAATCAGAGTACTCCGACTGATATAGAACATATATATTGGAAAATGGTACTTCTTGCACAAGATCACATTTGTGTAAATAACGCGTCTATCGACACCGGTGAGGAAGGGTACGGCTTCACTAAAGATCAACGCGACTCTTATGGGAAACATCCTTGGAATTTAAAGGTACTTAGTCAGAATAGTGGGAATGTTCTTAGATTTCTAGGACCGGTATTGGGAGTGACAGTACCCACTTTGCACCTCGGGATGGTCTTCTCAACCAGCTGTTGGCACAGAGATCCACACGGTCTGCCCTGGATTGAATACATGCATACAGGACCTGGCAAAAtatgGTATGGCATTCCGGATGAGCAAAGTGACAACTTTCGAAGTGCTGTAGAGTTACTGTGCCCGACATCATGTCAGAACAAATCGATTTGGCTTCCATCTGATATCACAATGATCCCACCGAACTTGCTCTTGCAGAATAACGTCTCCATGTCCAGAGTAGTACAAGAGCCGGGacaatttattgtagttttccCAAAAGCATATTCATGTTCTATTGCAACTGGGTATACTGAATCTGAGAGTGTGTATTTTGCGACTAATTCATGGCTGGAAACGATTGATCAAGTGTTTcaaGAAGTTCGCGAGAGCTGCGAACCGACAATGTTTTCTTTGGAACATCTGCTGGTGTCGGCGGCGCGGGACTCGCGCGCCTCCTCCGACGTTCTCAAACTGGTCAATGTCCACCTCGGGAAAGTCATAAGAGAAGAGCTGAGTAACCGTAACGCACTTGCCGCGTACAAAATACAGagcCAAAACCCACAGCAAAATAAGCATTCCCGCAAGCGACCGGCAGGCGCGTGGAATGTTCGAGATCAAGACGAGTGTGAGATCTGTCAAGCGACTTTGTACCTCTCCAAAGTGCGAGGTTTGACAGACAAGAAACGATCAGTGTGCCTCCAGCACGCCTTGCAGTTACTTGACACTGTGAAGAAGAGGGAACGTGACTTGACCAGCGTCGAGCTTGAGTTATTCTTTTCAGATGCAGAATTAGAAAGAATTATGACAAAAATCAACAATcgaatttaa
Protein Sequence
MKRRKVQAQRKFAQGVCIPPSTQSTNIDKVTNPTTQKDNEIRSNIFHSSTSAKGLLDIISFQNLHKHREPIVLLERLRHYPEQVQTSSSEVSQQYNISQLKKVTTALKHNMCLRSKKKLAKFVKRLKGKNISIIKNKRPPKLNKDASSLESIDSCNEDDKPLMYLAKEEKNNKAVNNTSSTTVKDKEKKVSFDIGPHEHAASDAYETQVKSGQQCDPRCHNPSRHKDGIRRRSIVHTRSHGTSSVDVRDFNQEIPLAPGRPHHTRSILKTDRVKRQRLQRSSRRSTTDACESDNGELHENDESSSSGSPQKIVLDVTKKSCLRSQQPTSRSVDDVSESGQEETKIAQPICNSNSQNKDNIRNSIEKEKPQKLYNQASISSKKLTSTESLIQPALGLQPIVKIETPASSSLLETVIIVKSSPKSSRVNSCSVGPQSKSDDSDAHSKATTSSEVTSHLNEYKMAAATEANVEPLEEHTVKPLKPDKYLNVPLSSRRLRNIPFDKVSKTNPEKRGIIKKQISSTGEHSESIDITSKIKNRRIYCPSKNYSSMNDVVYADPKDLVGRCERCEYCSFVDKVQCVSNMFKIQYCRKIIQSKIYGFDAEDDESVKSGDSFIPRPKKRHGNEPSSECDIQTCYLIYDKDSDHVVEVKRCRYANQVTRIESASIIPKTLNTKIMTVTAFDSDQLLDDIINLVISKKPNPTVETHSDSANGIKSGMSAFSVNGDHNDTEERSSAIPKPMLRASQTDAPIFYPTEQEFVDPIAYFNKIMPFAAKFGLCKVVAPNTFKPKCMLDDEVRFEVTNQYISRLYKRWGPASRELCAIKAYLASQSVIFSRPPLLEGVEVNLPKLYYLVQTWGGLKEVIEKKRWAKVAEEMNLTKTPKIEVKLDQIYVKYILPYDTMTDDERKDLMKAVDKHWSKKHRKMLQRALKPLYRQKRLIDESESSEEDIDEDIYVSGALAEAEDCISNGRQMNLLTFKKVAGKCMEINIPHSNQSTPTDIEHIYWKMVLLAQDHICVNNASIDTGEEGYGFTKDQRDSYGKHPWNLKVLSQNSGNVLRFLGPVLGVTVPTLHLGMVFSTSCWHRDPHGLPWIEYMHTGPGKIWYGIPDEQSDNFRSAVELLCPTSCQNKSIWLPSDITMIPPNLLLQNNVSMSRVVQEPGQFIVVFPKAYSCSIATGYTESESVYFATNSWLETIDQVFQEVRESCEPTMFSLEHLLVSAARDSRASSDVLKLVNVHLGKVIREELSNRNALAAYKIQSQNPQQNKHSRKRPAGAWNVRDQDECEICQATLYLSKVRGLTDKKRSVCLQHALQLLDTVKKRERDLTSVELELFFSDAELERIMTKINNRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01142198;
90% Identity
-
80% Identity
-