Pgig012829.2
Basic Information
- Insect
- Papilio gigon
- Gene Symbol
- osa
- Assembly
- GCA_027563995.1
- Location
- JAODUI010000010.1:3088238-3105030[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-26 7.3e-23 80.9 0.0 2 89 302 386 301 386 0.94
Sequence Information
- Coding Sequence
- ATGACGAAAGTAGGGAAAGGAATGTACCGGCGGCTGGGACTCGTGAGAATGAAGGAAAGTGGACCCCGCGAGGAAAGGGCGTGTGGAGTGAACGATCTGACAGGTCAGAACAGCAATGACTCGGGCGGCAGCGGCAGCGGCGGCGCGGGGCGCGCGACCACGCCGCACCTGAGGCCCACGCCCAGCCCCACCGGCTCCAGCGGCTCGCGCTCCAtgtcaccggctgtcgGAACTCAAAACGTACCGATGCCCCCGCGGCCGTCGTCATCGTTGTCGGACGGCGGCGGGCCGGCGGCGCGCGGCGCGGTGCCCGCGGGCGGAGCGCCTGGCGCTATGGTCGCGCAACCTTACCACCACGCGTACAAGGCCGCGCACTACCCGCCGCAGCCCTACGGCTACCCGCCACGCAACCATCACCCCTACCCCTACGCCGGCTACCGGCCCGCGCCGCCGCCCCATCCGCCACAGCACTATCCTCCGCTCAAGGGTGCACGACATATGGGTCCTCCGGGCGAAGCGATGCCGCCCCCAGTGGCGCCGGGCGAGCACGACAACGGGCCAGCCGCCCCCgccaccgcgctcgtcaccaccggccccgacggtgcgccgttggacgagggcagtcaacagagcacgctcagcaacgcttccgccgCGTCAGGCGAGGAGCAGTGCGGGTCGAAGGGGCGCAAGGAAGTGGGCGCGGGCGGCGCGGGCAGCGCGGCGCCCTCACCCTCGCCCGGCGGCGGCTCGCACTCCTCCATGCACGACGACTACGACGCGCCCGCCGCTTGGCGCCCGCCGTCCAGTCCCGTGTTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGaagtcggactcgctgggcaagctgtacgagatggacgacgcgccggagcgccgcggctgggtggagcggctgctggcgttcatggaggagaggcgcacgccgatcgccgcctgccccacgatatccaagcagccgttagatctctatcggctgtatctgctggtgcgcgaccgcggaggatttgttgaggtcacaaagaacaaaacgtggaaggatatagcgggtctgttgggaatcggtgcctcgtcttcagcggcctacacgcttcggaagcactacacgaagaatctgctcgcctatgaatgtcatttcgaccgcggcgggatcgatccccagcctattatcaaccaagtagaagcttcaactaagaagaagggcggcaaaTCTAATAATACTGCTAGTGCCGcagggtcatcgaattcgcaagattcgttcccgtccGGGGGCGGTGGCGGCGGCGGCGCGCCCGCGGCGGCCGGCATGGACGGCTACGGCGCGCAGTACGCCGGCTACCCGCCGCCCAACACGCAGCCGCAGGGCGGCGGGCCGGGCGGCGACAACCTCGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCGCGCAGACCCCCAGCTTACCAACAAGGATACGGGTATGAATATGGATCTCCATACCCGTCGAACAGGCCCGTTTACCCTCCTTATGGTCCAGAAGGTGACAGAGCGTACGGTAGTGGCGAGTACCGGTACGGGGGGTATGCGGGCGGGTACCGCGCGGGCGCGCCGCCGCCGGCCGGCACGCCGCCTCCTGCGCAGCCTTACCCCGACTACTACcttcaacatgagccttag
- Protein Sequence
- MTKVGKGMYRRLGLVRMKESGPREERACGVNDLTGQNSNDSGGSGSGGAGRATTPHLRPTPSPTGSSGSRSMSPAVGTQNVPMPPRPSSSLSDGGGPAARGAVPAGGAPGAMVAQPYHHAYKAAHYPPQPYGYPPRNHHPYPYAGYRPAPPPHPPQHYPPLKGARHMGPPGEAMPPPVAPGEHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEQCGSKGRKEVGAGGAGSAAPSPSPGGGSHSSMHDDYDAPAAWRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKSNNTASAAGSSNSQDSFPSGGGGGGGAPAAAGMDGYGAQYAGYPPPNTQPQGGGPGGDNLAASNPFDEPPGPRRPPAYQQGYGYEYGSPYPSNRPVYPPYGPEGDRAYGSGEYRYGGYAGGYRAGAPPPAGTPPPAQPYPDYYLQHEP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01129834;
- 90% Identity
- iTF_01129834; iTF_00180228;
- 80% Identity
- -