Pkot008436.1
Basic Information
- Insect
- Pachliopta kotzebuea
- Gene Symbol
- osa
- Assembly
- GCA_018246255.1
- Location
- DWLS01004823.1:1-11528[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-26 1.2e-22 80.9 0.0 2 89 218 302 217 302 0.94
Sequence Information
- Coding Sequence
- ATGCCCCCGCGGCCTTCGTCCTCGCTGTCAGACGGCAGCGGACCCGCAGCCCGGGGCGCCGTGCCTCCGGGTGGTGCGCCCGGGGCTATGGTCGCGCAGCCCTATCACCACGCGTATAAAGCGGCGCACTACCCGCCGCAGCCCTACGGCTACCCGCCCAGGAACCATCACCCCTACCCCTACGCCGGTTACCGACCCGCGCCACCGCCCCATCCACCTCAGCACTATCCACCATTAAAGGGCGCTCGGCATATGGGTCCGCCGGGCGAGGCGATGCCGCCGCCCGTCGCTCCCGGCGAGCACGACAACGGCCCGGCCGCACCCGCCACCGCGCTCGTCACCACGGGGCCCGATGGTGCGCCCCTGGATGAGGGCAGCCAGCAGAGTACACTGAGCAACGCGTCCGCCGCATCTGGCGAGGAACAGTGCGGCTCCAAGGGGCGTAAGGAGGTCGGAGCGGGGAGCGCTGCGCCGTCGCCCTCGCCCGGCGGTGGTTCACACTCCTCCATGCACGACGATTACGACGCGCCCACTGCCTGGCCCCGCCCGCCCTCTAGTCCAGTATTTAACAGTCACATACCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGATGCGCCGGAGCGTCGTGGCTGGGTGGAGAGGCTGTTGGCGTTCATGGAAGAGCGGCGCACCCCGATCGCGGCCTGCCCGACCATCTCCAAGCAGCCGCTCGACCTCTACCGGCTTTACCTGTTGGTGCGCGACCGTGGTGGTTTTGTCGAGgtcacaaaaaataaaacttggaaGGACATAGCGGGTCTATTAGGGATCGGGGCGTCGTCGTCGGCTGCGTATACTCTACGAAAGCACTACACTAAGAATCTGCTGGCTTATGAATGCCATTTTGACAGAGGCGGAATCGATCCCCAACCCATCATCAATCAGGTCGAAGCCTCAACCAAAAAGAAAGGAGGCAAGTCGAACAATACGGCTAGTGCGGCAGGGTCATCGAACTCACAGGAATCATTCccgggcggcggcggcgccgCTGCGGCCGGTGCTATGGACGGCTACGGCGCGCAGTACGCCGGCTACCCGCCGCCCGCAAACCAACCACAGGGCGGCGGGCCGGGCGGCGACAACCTCGCCGCCTCCAACCCCTTCGACGAGCCGCCGGGGCCGCGCAGACCCCCAGGTTACCAACAAGGTTACGGGTACGAATACGGATCTCCGTATCCATCAAATAGGCCCGTATATCCGCCGTATGGACCAGAGGGTGATAGgGCGTACGGCAGTGGTGAATATCGGTACGGCGGTTACGCAGGCGGGTACCGCGCGGGAGCGCCGCCGCCGGCTGGCACCCCGCCCCCCGCGCAACCATACCCGGACTACTACCGCGCCCAGCCAGCACCGCACGCCCACCCGCAGCACCCGCCGCACCCGCAGCACCCGCAGCACCCGCAGCACTCGCAGCATCCGCAGCACTCGCCGCACCCGCAACACGCGCAGCACACTCCGCCCATAGAGATGTCTGGCGGCGCGCAGCTGACGGTCGGTAACCTTATGAGCTCGCAGCTCGCACGCCAGCTGGTGGCGCCGCTGCCGCCGAGCGCGCGGCCCTACTACGGAGGCGGTAAAGGTGCGAACGCGAGCGCGTCCGGCGGCCCCGTGGGTGCAGGTGGCGGTGCGCCCGCGGGCGCGGCCGGTGCGGGCGGCGCGGGCGG
- Protein Sequence
- MPPRPSSSLSDGSGPAARGAVPPGGAPGAMVAQPYHHAYKAAHYPPQPYGYPPRNHHPYPYAGYRPAPPPHPPQHYPPLKGARHMGPPGEAMPPPVAPGEHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEQCGSKGRKEVGAGSAAPSPSPGGGSHSSMHDDYDAPTAWPRPPSSPVFNSHIPPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMEERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKGGKSNNTASAAGSSNSQESFPGGGGAAAAGAMDGYGAQYAGYPPPANQPQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYPSNRPVYPPYGPEGDRAYGSGEYRYGGYAGGYRAGAPPPAGTPPPAQPYPDYYRAQPAPHAHPQHPPHPQHPQHPQHSQHPQHSPHPQHAQHTPPIEMSGGAQLTVGNLMSSQLARQLVAPLPPSARPYYGGGKGANASASGGPVGAGGGAPAGAAGAGGAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00180228; iTF_01154798; iTF_01142193;
- 90% Identity
- iTF_01142193;
- 80% Identity
- -