Pelw015394.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Papilio elwesi
Gene Symbol
Lztr1
Assembly
GCA_029641285.1
Location
CM056356.1:4249590-4267604[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.3e-13 7.7e-11 42.6 0.0 4 108 364 500 361 502 0.85
2 3 3.5e-17 1.2e-14 54.9 0.0 9 97 595 683 588 697 0.85
3 3 0.97 3.2e+02 2.0 0.0 75 101 695 721 686 729 0.82

Sequence Information

Coding Sequence
ATGCAAAACATTGGAAAAATGATAACAGAACAGCTGCGAAATCCCAACGAATTGGATATTAACCTTCGAATGGAATTTGGTCCATTTGTGACTGTACATAAGTGGGAACGCATGTCGGAGTGTTATGAGTTTGTAGGTGCCAGaCGAAGCAAGCACACAGCAGTAGCATATAAAGATGCTATCTATGTTTTTGGTGGTGATAATGGAAAATCCATGCTCAACGATCTAATTAGGTTTGATATCAAAGAAATGTCCTGGACTAAGACAGGCTGCATGGGTACTCCCCCAGCACCAAGATATCATCATTCTGCTGTGGTTCATATGTCATCTATGTTTGTTTTTGGGGGTTATACTGGAGATATTCTTGCCAATTCTAACCTAACCAATAAGAATGACCTATTCGAATACAAGTTTCCTAGCGCCCAGTGGGTGCAGTGGAGGTTTACTGGCccGGAGCCCGTGCCAAGGTCAGCGCATGGTGCAGCAGTGTACGACGACAAGCTTTGGATCTTCGCGGGCTACGACGGCAACGCGCGCCTCAATGATATGTGGACGGTCAATTTGGCTGGTGAGAACCGTCAATGGGAGCGTGTAGTACAGAAGGGGCAGTGCCCGCCCACGTGCTGCAACTTCCCGGTGGCGGTGGCGCGCGGCAAGATGTACGTGTTTAGCGGACAAAGTGGCGCCAAGATCACCAACGCGCTCTTCCAGTTCGACTTCGAGTCACACACATGGAGTCGTATCTGCACGGAGCATCTGCTGCGGAGCGCGGGCCCGGCGCCAGCGCGGCGCTACGGGCACACGATGCTGGCGCACAACCGACACCTGTACGTGTTCGGCGGCGCCGCGGACAGCACCATGCCCTCTGACGTCTACTGCTTCGACCTTGACACGCAGATGTGGGCAATGATCCAGCCGGCGCTTGAGTCTCAGATACCTTCTGGACGACTGTTTCACGCGGGCGCGGTGGTGGGTGACGCGATGTACATCTTCGGCGGTACAGTCGACAACAATGTACGCAGCGGCGAGCTGTATCGCTTCCAGTTGTCCAACTATCCGCGCTGCACGCTGCACGAAGACCTGGGGCGCATTATGCGCTCGGAGCAGTTCTGCGACGTGATCCTTTTAGTGGGGGATGAGGATTCCCCCACGGCTATGCTTGCGCACCAGGCATTACTCGCCGCGCGCTCCACTTGCCTGCGCGACAAGATCATGGAAGCTCGTGAAGCGCGAGCCGCCTCAGTCGAAGCGAAACCTGTGGAGCCGTACAACCACAAAGAGAAGCCGGATCTGGTCATCCGCCTGCCTGAAGCCAAGCCTGAAGCCTTTCGCATGGTCCTCACTTATATCTACACGGATAGGATCGATCCAACCGAAAGACTGACAGAAGAGAGCCCCGCGTCCGACGACACGATCCAGCTGGTGATGGAAGTATTCCGCCTGTCGCTGCGACTGGACATCCCGCGGCTCTGCGGCCTGTGCGCCAAGTTCCTGCGCGGCAACCTCTGCCTCCGCAACGTGCTCAAAGCACTGCACGCCTCGCACGTCTCCAACCTGAGCTGCATCAAGGAGTTCTGCTTACGTTTCATCGTAAAGGACTACAACTTCACGCCGATCGTGATGTCGAGCGAGTTCGAGGAGATTGACCGCAACCTGATGGTGGAGATCATCCGGCGGCGCCTGCTGCCGCCATCGCCCAAGGCATCCGGCGGGGACCCCTCGGATGGAAATTCGGGTACAACGCTGGAACAGGACTTGAGCGTGTTCCTGACCGCCGGCGCTGAGTTGAGCGACGTGACGCTGCGTGTGGGCAGCGTGTCGCGCCCCGCGCACCGGTCCATACTCGTTGCGCGCGCAGCCTACTTCGAGGCAATGTTTCGATCCTTCTCGCCAAGGAACAACATCGTCAATATACAAATATGCGACTCAGTTCCGTCGGAGCCGGCGTTCGACTCTTTGCTGCGCTACATATACTATGGCGAGACCAACATGCCCACGGAGGATTCCCTGTACCTCTTCCAAGCTCCCATTTACTACGGCTTTACCAACAACCGTTTGCAAGTGTTTTGCAAGCACAACTTGCAGACCAACGTGTCCCCGGACAACGTGCTGGCAATCCTGCAGGCTGCGGACCGAATGCACGCCACTGACATCAAAGAGTACGCGCTCAGGATGATCGCTCACCAGTTCTCTGTGGTGAGTCGCAATGTGGCTCGTCAAGAGGCCATCAAGAATCTGGCTCAGCCACTTCTGGTTGACATTGTGTTAACCTTGGCTGAAGAAGGTAAGTTCGAAACTCCTGCGCAGACGCAACCCAGGTCTGTCATTGCTCCTTCCACGTCAGCTGAACCCATCATCTAA
Protein Sequence
MQNIGKMITEQLRNPNELDINLRMEFGPFVTVHKWERMSECYEFVGARRSKHTAVAYKDAIYVFGGDNGKSMLNDLIRFDIKEMSWTKTGCMGTPPAPRYHHSAVVHMSSMFVFGGYTGDILANSNLTNKNDLFEYKFPSAQWVQWRFTGPEPVPRSAHGAAVYDDKLWIFAGYDGNARLNDMWTVNLAGENRQWERVVQKGQCPPTCCNFPVAVARGKMYVFSGQSGAKITNALFQFDFESHTWSRICTEHLLRSAGPAPARRYGHTMLAHNRHLYVFGGAADSTMPSDVYCFDLDTQMWAMIQPALESQIPSGRLFHAGAVVGDAMYIFGGTVDNNVRSGELYRFQLSNYPRCTLHEDLGRIMRSEQFCDVILLVGDEDSPTAMLAHQALLAARSTCLRDKIMEAREARAASVEAKPVEPYNHKEKPDLVIRLPEAKPEAFRMVLTYIYTDRIDPTERLTEESPASDDTIQLVMEVFRLSLRLDIPRLCGLCAKFLRGNLCLRNVLKALHASHVSNLSCIKEFCLRFIVKDYNFTPIVMSSEFEEIDRNLMVEIIRRRLLPPSPKASGGDPSDGNSGTTLEQDLSVFLTAGAELSDVTLRVGSVSRPAHRSILVARAAYFEAMFRSFSPRNNIVNIQICDSVPSEPAFDSLLRYIYYGETNMPTEDSLYLFQAPIYYGFTNNRLQVFCKHNLQTNVSPDNVLAILQAADRMHATDIKEYALRMIAHQFSVVSRNVARQEAIKNLAQPLLVDIVLTLAEEGKFETPAQTQPRSVIAPSTSAEPII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01143188; iTF_01144632; iTF_01148910; iTF_01141008; iTF_01148176; iTF_01149689; iTF_01147462; iTF_01142475; iTF_01140286; iTF_01139031;
90% Identity
iTF_01139031;
80% Identity
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