Basic Information

Gene Symbol
-
Assembly
GCA_029641285.1
Location
CM056365.1:2725337-2726455[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.5 9.1e+03 -2.7 0.2 7 15 185 193 184 195 0.83
2 2 3.6e-08 3.5e-05 24.3 0.2 2 26 223 248 222 252 0.92

Sequence Information

Coding Sequence
ATGTCAGAACAAGACAAATCAAACACAACTAGTCTGGATACAGAATACATACCggcacttaaaaaaataaaaacaaatgaagaaTCTTTTGTAATAGAGGAAAATAAAGACGAAAAATCGAAAAATGTCGAAAGTCTTGATTCAAACATTgaaaaaacagaaaacaaagaACCAGTGAATGATTTTAACATTGAAAAGAAAGAAGACGATCTTAGTCAGCCAAAACTACACAGACAAAGTTTGTTAGGAAAAAATGATACAGCCACAAAATTAGAAAAGCCATCGATCAAACGACGTAAAAAAAGTAAGCCAATCTACGACGGAAATTCTTTAATTGATCAAATTTCTTTACAGGCGCCTGTTAGACGTAGAGGCGCTTACAAAACCGAAAACAAATCTCCACGTTTAACCAGAAAActtaaagtaaatgtaaaacCTAAAACAACCGAATTTGTgaatacaaaagaaaacaaaattgacaaaataaCTTCTACTCCTACTGCGACCATTGCAGACGAGTATATTGAATCTTCTATTAGTGAGGAATACGTAGAAGAGGacgaagaaattaaaaatgcaaGCCAAGATATTAAACTTCATGTTGATGATGACAATGTTTTGAGTGAAGATGAAGACgtactttgttttaaaaacaaaaagaaaccaaAGCGATGGACACAAGAAGAAACAGACGCTTTGCTGGAGGGTGTTCGTAAGTTTGGAAGAGGCAAATGGTTAGAAATTTAcaaagataacaaaaaaatatttaaaaatagaagaaaaccAAGAGAATTGTCTGACAAAATGAGAATTATTGATAAAAGTTCtgctatttataaaaatcctccTACAATATACACACTGATCGATGAAACTTTTAAGCCTATTTTAGATCgaaataataaagaaacgaCTTTTCTAGCTAAGTTTCCGCATGAAGCTGCTGTCTTGGTAGTCAAAACTTTACCAATGCTTTATGGGACTATTATTCGTCTTACTTGTGATGATGATAATGGTAGTAAAGCTTTGCATAAATACAAGGTTTTTACAACGTTTCAAGGAAGACCACGCGTTAGAAAAATATCTGGCAAGAGTAAAAAACGTGTAGATGGACCGTAG
Protein Sequence
MSEQDKSNTTSLDTEYIPALKKIKTNEESFVIEENKDEKSKNVESLDSNIEKTENKEPVNDFNIEKKEDDLSQPKLHRQSLLGKNDTATKLEKPSIKRRKKSKPIYDGNSLIDQISLQAPVRRRGAYKTENKSPRLTRKLKVNVKPKTTEFVNTKENKIDKITSTPTATIADEYIESSISEEYVEEDEEIKNASQDIKLHVDDDNVLSEDEDVLCFKNKKKPKRWTQEETDALLEGVRKFGRGKWLEIYKDNKKIFKNRRKPRELSDKMRIIDKSSAIYKNPPTIYTLIDETFKPILDRNNKETTFLAKFPHEAAVLVVKTLPMLYGTIIRLTCDDDNGSKALHKYKVFTTFQGRPRVRKISGKSKKRVDGP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01141616; iTF_01026147;
90% Identity
iTF_01141616;
80% Identity
-