Basic Information

Gene Symbol
-
Assembly
GCA_905147345.1
Location
CAJHVM010000043.1:68613-69734[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.5 1.2e+04 -1.7 0.2 7 15 187 195 186 197 0.87
2 2 6.5e-08 0.00012 23.9 0.1 2 26 224 249 223 254 0.93

Sequence Information

Coding Sequence
ATGTCAGAAGAAGACAAATCAAACACAATTGGTCTGGATACAGAATACATACCggcacttaaaaaaataaaaataaatgaagacTCTTTTGTTATGGAGGAAAATAAAGACAACAAACCTCAAAACGTAGAAGGACATATTCCTCTTGatccaaacattaaaaaaacagaaaacacaGAACCAGTGACCAACTTAAACgttgataaaaaagaaaacgatCCTAATCAGCCAAAAATACAAAGACAAAGTTTGTTAGGAAAAAATGATACAactgaaaacttaaaaaaaccgTTAGTTAAACGACGCCAAAAAAGATCGACCTATGACGGGAATTCTTTAATTGATCAAATTTCGTCACAAATGCCTGCAAGACGTAGAGGCACTTACAAAACTGAAAACAAATCCCCACGTTTAACTAGTAAACTCAAAGTAAATATAAAACCTAAAACAAGCGAATCTGTGAATAGCAAAGAAAACAAAACCGACAAAATATCTTCTACTCCTACTGCGACTATTGCTGATGAGTATATTGAATCTTCTATTAGTGAAGAGTACGTAGAAGAAGATGAAGAAATAATTAATGCAAGCCAAGACATTAAACTTCATTTGGATGATGAAAATGTATCAAGTGAAGAAGAtggattttgttttaaaaataaaaagaaaccaaAGCCATGGACACAAGAAGAAACAGACGCTTTATTAGAGGGAGTTAGTAAATTTGGAAGAGGTAAATGGTTAGAAATTTACAGAGATAACaggaatatatttaaaaatagaagaaaaccGAGAGATTTGTCTGATAAAATGAGAGTTATTGATAAAAATTCAGCTGTTTACAAAAATCCTGATATAATATACACAGCGGTTGATGAAACGTGTAAACCTCTTTTAGatgcaaataaaaaagaaataactttTTTGGCTAAGTTTCCCCATGAGGCTGCTGTTTTAGTAGTTAAAACTTTACCAATGCTTTATGGTACTATAATTCGTCTTACttgtgatgatgataatggtagTAAAGCTTTACATAAGTACAAGGTTTTTACAACGTTTCAAGGAAGACCACGTGTTAGAAAAATATCtggtaaaagtaaaaaacgtgTAGATGGACCATAA
Protein Sequence
MSEEDKSNTIGLDTEYIPALKKIKINEDSFVMEENKDNKPQNVEGHIPLDPNIKKTENTEPVTNLNVDKKENDPNQPKIQRQSLLGKNDTTENLKKPLVKRRQKRSTYDGNSLIDQISSQMPARRRGTYKTENKSPRLTSKLKVNIKPKTSESVNSKENKTDKISSTPTATIADEYIESSISEEYVEEDEEIINASQDIKLHLDDENVSSEEDGFCFKNKKKPKPWTQEETDALLEGVSKFGRGKWLEIYRDNRNIFKNRRKPRDLSDKMRVIDKNSAVYKNPDIIYTAVDETCKPLLDANKKEITFLAKFPHEAAVLVVKTLPMLYGTIIRLTCDDDNGSKALHKYKVFTTFQGRPRVRKISGKSKKRVDGP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01141618;
90% Identity
-
80% Identity
-