Basic Information

Insect: Papilio demoleus
Gene Symbol: -
Assembly: GCA_029286655.1
Location: JAGSMY010000006.1:7514891-7521480[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 3.3 3.2e+02 2.6 1.0 1 23 54 77 54 77 0.94

2 19 0.59 57 5.0 2.9 1 23 84 107 84 107 0.96

3 19 5.5 5.3e+02 1.9 3.8 1 23 187 209 187 209 0.96

4 19 0.00063 0.061 14.3 0.8 2 23 215 236 214 236 0.97

5 19 4.6 4.5e+02 2.2 2.9 1 23 242 264 242 265 0.93

6 19 0.14 14 6.9 3.8 2 22 508 528 507 528 0.96

7 19 0.16 15 6.8 0.5 2 23 782 803 781 803 0.96

8 19 0.0043 0.41 11.7 0.7 2 23 888 909 887 909 0.97

9 19 0.35 34 5.7 0.5 1 23 917 939 917 939 0.95

10 19 0.078 7.5 7.8 3.6 1 23 973 995 973 995 0.95

11 19 5.8e-05 0.0056 17.6 4.2 1 23 1003 1025 1003 1025 0.99

12 19 0.067 6.5 8.0 2.8 1 23 1108 1130 1108 1130 0.99

13 19 1 98 4.3 2.7 1 19 1186 1204 1186 1208 0.91

14 19 0.0067 0.65 11.1 0.7 1 23 1304 1326 1304 1326 0.95

15 19 0.028 2.7 9.2 0.4 2 23 1333 1354 1332 1354 0.95

16 19 0.0056 0.54 11.4 2.6 1 23 1443 1465 1443 1465 0.97

17 19 0.00014 0.014 16.4 1.4 1 23 1471 1493 1471 1493 0.99

18 19 4.4 4.3e+02 2.2 1.4 1 23 1585 1607 1585 1607 0.96

19 19 0.018 1.7 9.8 3.7 1 23 1618 1640 1618 1640 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	3.3	3.2e+02	2.6	1.0	1	23	54	77	54	77	0.94
2	19	0.59	57	5.0	2.9	1	23	84	107	84	107	0.96
3	19	5.5	5.3e+02	1.9	3.8	1	23	187	209	187	209	0.96
4	19	0.00063	0.061	14.3	0.8	2	23	215	236	214	236	0.97
5	19	4.6	4.5e+02	2.2	2.9	1	23	242	264	242	265	0.93
6	19	0.14	14	6.9	3.8	2	22	508	528	507	528	0.96
7	19	0.16	15	6.8	0.5	2	23	782	803	781	803	0.96
8	19	0.0043	0.41	11.7	0.7	2	23	888	909	887	909	0.97
9	19	0.35	34	5.7	0.5	1	23	917	939	917	939	0.95
10	19	0.078	7.5	7.8	3.6	1	23	973	995	973	995	0.95
11	19	5.8e-05	0.0056	17.6	4.2	1	23	1003	1025	1003	1025	0.99
12	19	0.067	6.5	8.0	2.8	1	23	1108	1130	1108	1130	0.99
13	19	1	98	4.3	2.7	1	19	1186	1204	1186	1208	0.91
14	19	0.0067	0.65	11.1	0.7	1	23	1304	1326	1304	1326	0.95
15	19	0.028	2.7	9.2	0.4	2	23	1333	1354	1332	1354	0.95
16	19	0.0056	0.54	11.4	2.6	1	23	1443	1465	1443	1465	0.97
17	19	0.00014	0.014	16.4	1.4	1	23	1471	1493	1471	1493	0.99
18	19	4.4	4.3e+02	2.2	1.4	1	23	1585	1607	1585	1607	0.96
19	19	0.018	1.7	9.8	3.7	1	23	1618	1640	1618	1640	0.98

Sequence Information

Coding Sequence: ATGCTTCAACAGATGTCCTCGTCGCCGGGCGCGCACGTCGGCGAGGTCGCGACTATCTTGCGCTCCTTCGAAGGCCGCCTGTGTGGCGACGCGTCCTCCGAGGGTTCCTCGGACGCCGCCGACGACTTGGAACTACCACAGTGCAAGATAAGAAGGAACTACAACTGCACCAAGTGCACGTTTTATACACAAAACCCGCGTGCTTATCTTATCCACACGCGTGACGTTCACTTCGTGAAGCTAAAGATTTACGACTGTGCCTTTTGTGTATACGCCTCCCGACATCACCAAAAACTACTGCGACATATTAAAATGGTCCACGGTGAGAGCGGCTCCGAAAGGCACATGGACACGGAACCCGTGCCCCCGATGCCGACCGCGGCTACCGCTACTGAGTCATCGGAGAAAGAAGAAGACTTGCTCGAAGAGGTAGAGGAGTGCGATGAGGACATGGACGTCGAAGATTGCGGCGACGACCTCATCGAGCGGTTGGAGGTCGATGGTGACGCATCGGTGATCGTCAACGGCACCTCCGACGCTAAAGTCAAAGGAAAGTTTTTTTCGTGCGACAAATGCAATTACGTGACGCATATTCGAGCGCGATACACGAAGCACGTCAAGTACCATTCGATGCCGATGATAAAGTGTACCATATGTGACTTTCGGACGCCATACAAATGGAATTTAGATCGTCATATGAAAAATCACGGCGGCACGGGCAGCTTCTGCTGCTCGATTTGCAACTTTACCGCCGACATCAGGCAAAGTCTGACGGTGCATGAGATGAATCACCATACGCCGCCTGTGGGGCAGTTGACGTCGAACCGACGTCGCAACCGAGTGGGCGCCAGCGACCTCTGCCTCGCCGAGGAGGCGGCGAGCGGGAGCACGCGCGTCCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGATCCTCGCACTCGGCCTCGGAAATGGGTTTACAATACGCAGAAAGAGAACTGGTCAGTTGCAATAGCGATTCAAACGATGCTTCTGAAACATCTTCTAAGAATGGTTCAAGTCACAGACGTGCCAGTCGACATCAAGAATCATCTTTAGATGATTCAAAGTCACATAAACAGAGCAGAAAGATACCCAGACCAATACCACAGCTGATACCTCTGAATTCATCAACaccaaatcaaaataaaacttcatcGGGTGAACCGCCGACGAAAAAATTCAAAGAGTCACTATCGAGCGATTCACCAGATTCAAGTAACTCAAATAGAATAGACTGTCTCCCGCCAGATGTCACATTTACACCGGTCGTTACTAGTGCTCCAGTTAAAGAAACAACAACGAGGAAGAAACATGAATCGTTTTTCGATAAATTGAAAGAAAGACTGCTCACAGAAACCGGAGAAGAAGGATCTTTAAGATGTAAGAACTGCGGATTCGAAAGTAAATGTTTATCGGAACATTCGGTCCATGAAAAAACATGTTTGACTCAGTCCAACAGAGCACCCGCCAATACGTTGATGTCAAGCCTAAGTTCAACGAGATGTCAAAATTGCAGAcacaggtgtaaatctagtgCAGATCTATATGTTCACATGAAAACATGTAAGAAAAATGAGGAAGAAGTAAAAGAAATTCCAACACAAACACAAGACAGCAGTGAAGCTGTAGACTTGAACGCAGAGAAAGAAGTAGAGCCCCATCCTATGGAGAATGTCGTATTCGTGTGGAATAATATCAATACGGAGGCAAATAAATTCGACACACCGCTAGATATCAGCATTAATGATGACTCCACACTTCCAGAACCACCTCAAAGTTTTGACTCTGAAAACGTTGATGAAAATGAAGGTATGAACCTATCTCCGAGTCAAGCTGTTGGAAAGAAGGTATTCAAATGTCCGCACTGTATGTTTTGGGCTTCGACAGCGTCTCGGTTTCACGTACATATTGTAGGACATTTAAACAAGAAACCGTTCGAATGTTCTCAGTGTAAATACAAATCTAATTGGAGATGGGACATaactaaacatattaaattaaggtCCGCTAGGGATCCTAATCATACGGATGCAAAAGTGCTTATGACAGATGAGACCGGAAGAAGAAATTATagcaaatacaataaatttttggCAATGCCGATACTTAATGAAAATGGAGAGAACGAATTCCATTATATTGAACCAAATACAAATGTCGACGCGTCTTTAGATGTCGACGAAAGTTACAATGATGCAAACGAACTTACAAACACTTCGACAGATATGCAGCCACTAGATTTACAAACTCAACATGGCGactataaatatagtttagaTAATAGAAGCGAAGACATGAAGAGACCTAAAAAGACTTTatggaaatgtaaaaaatgcaaTTACAGAGACTCATCGAAAGAAGCTCTATTGGAACATGTTCGAGAACATTCGAAGGCATCTTCGTACAACTTAGACGACGCAAAGTCGCAACAGGGCGGTAGCGGTGCGACCAAGAAGCCAGACAATACAACTGACCCCGCCGACTTGGCGTACCGCTGCGGCCATTGCAATCAGCTGTCTAATTGGAAACATGTAATACAGagGCACTGCAGGCTTAAACATGACGGGGTTATAAAAGTCGTTACCACAGTGAAGCCGAAAGTGGAAGGGTCGACCTTGTTAAACGAGTCCGTATCGGATACCTGCACCAAATGTCCTTTTAAAAGTAGCGACAAAACGATGCTAATTATACATATGCAACAACACCAGCCCTCGCCGCTGTCCATATTTAAATGCTACTTCTGTCCATTCTTTGTGAAAGACGAACAAGAACTGGTCCAACATCTTGTACTGCACGGCATTACTGACCCCGAAGATTACATTGCGAAAGCAATGGGTGGCAAATCCCCATTAAATGAACAGCAAGGCACAACACACACTTCGTCGACTAAACGACACAAATGTACCGAATGCCCGTACGAGACCAACAGCAAATCTCAGTTTATGTACCACGAGCAATTCCACCGGCTGCCCGCAGACACTCCTTATAAATGTCCTGAATGTAACTACAGCGTCTCCAAAAGACATCTTCTTCATCAGCACATGCGGGTTCACGGTATTATGTCGAAAAAGGGTGAATTCGAAGCAGATTTTGAAGCGTCCACttcaatttcatataaaactgAAAACAAATGTGACCCTAATCTCGATGAGATTCCATACGTGTGGGTGTCCGCAAAGAACGAATTCCATAAAATGTACAAGTGTCGATATTGCTCCTACGTCAATactcaaaaatgtaaaataccaAATCATGAAAAAATTCATTGCACCGTAAATGCACATAACGAAGTTTTGGTGTACAAATGTTTGGATTGTAAATTTACTTGTGATAATTCTGGAAGGTTAGCGGAACACTCGAAGACACACGGAGAAATATACGGCCGCATATATTGCCCCGTCGAGTCCGATGTCCCAGATGAAGATCAGATAGCGAAACTGCGTAAGGTTATTGAAGAAGAAAAAACGAATGCCGCCGATGATTTCGTTAAAGAGGAATGTATGACCCCGGAAAACaaggtaataaaaacattacactTTTGTCAAAAATGTCCAGCGCGTTTCTTCACAGACTCTGAGTTAAAAATCCATGACAAATTCCACGATCTCTCGTTTCCGAACAAGTGTAGGAGTTGTGAATTTTCAACACTTCATGACGTTGAACTGGCAGCGCACGTGTTTGTTCACTCCGATGAATATcatacaaaaactaaaatgcTTAAGTTTATTCATAACACGGATCCGACGCATCCTGAACCTCGGCTGGAACTGGTCCACTGCGCGGCGACGTCCGAAATAAACTGGGTCGTCACGCACCCCGGTAGAAATTATGATGATATGGACATTTCACCAAAGAAGTCCCATGAAGGAAAGCATATTCCAAAACAGTATTTGTGCAAGGAATGTCCggcaaaattctttaaaacgTCAGCGCTGAACTATCATATGAGCTTACACGGAGGCGACGGTGAAAACAAATGCAAAAAATGCAGCTACGCcgttaaaaatattggaaaTTTGGCCAAACACGAGTTGTTACACGAGACAGACGCCAAGTCGACCTGTGACTACGAATCCGGCGACGATATGGACTACAAAAATATCCCACTGTCAGGTACTGATCTATTTCAAAGAAAGACTGAGGCTCAAAAGAGAGTTTTAAGTGATAAAGATAAGCTCGTCAAACCTAATGACCATTTTCCGCCCGTTCTTCAAGCAGATCCTCAGTTTGGGTATCTAATGCATGGCAATCCAGAGTTCATATACccaacatatttaaaaaatggacgACAAAAGGAGAAGCGATACAAGTGCCATAAATGTCCTTCCGCGTTTGAGAAGAGGGAAcagtataaaatacatttatcattGCACGGCTCCAAGCAGCGATACAAGTGTGAACTGTGTGACTACTCCGTGAAGTATTACGCTAATTATGTTCAACATATGAGGAAGCATCAAAAGAACGATGAAGCTGTCGCAGAGAGGAGAAAAGGTTGCAACGGATACCTCGAATCAGAGGAGCCTACGGGGAACAAAAAAGACGATAGTACTGAGAACATCAAATTGGCGATCAAAACTATGCCTAAAGGTATACCGAAAAGTGATTTCCAACAATTCTCGATAAGTGATCAACAAACACTTAGATTACTACAAAGGAGATGTGcattaaatacttctttaaatgaaacaaataaatcggATGCGACGGTAACCAAGGATCGTAAATTACATCCGTGTTTCTTGTGTCCTTATACCAATCAGCGACAGGATGCCCTTGGTAACCATTTCAGAAGACACGACAAAAATGACAACTTTAGTAATGGCAACCATAAATGTTCATTTTGTGACTTAGCAGTTGTACAATCGCATTTCCTACGGGACCATTTGAAAACTCATTTCAACTACCAGAAAAATCTTACGCCCGAGTGTTATGTCGCTAATGAAGGTGTAaagtttacaataacaaaactaGATGACGAAGATACCGTCACGGATCTCAAATTAGATATACAAAGCAAAGTAGATATATGTAATGatgaaaaagtatttgttaaaataaaaacaggtGAATTATTGGTAGGATGA
Protein Sequence: MLQQMSSSPGAHVGEVATILRSFEGRLCGDASSEGSSDAADDLELPQCKIRRNYNCTKCTFYTQNPRAYLIHTRDVHFVKLKIYDCAFCVYASRHHQKLLRHIKMVHGESGSERHMDTEPVPPMPTAATATESSEKEEDLLEEVEECDEDMDVEDCGDDLIERLEVDGDASVIVNGTSDAKVKGKFFSCDKCNYVTHIRARYTKHVKYHSMPMIKCTICDFRTPYKWNLDRHMKNHGGTGSFCCSICNFTADIRQSLTVHEMNHHTPPVGQLTSNRRRNRVGASDLCLAEEAASGSTRVPKEEEGSGDSRSSHSASEMGLQYAERELVSCNSDSNDASETSSKNGSSHRRASRHQESSLDDSKSHKQSRKIPRPIPQLIPLNSSTPNQNKTSSGEPPTKKFKESLSSDSPDSSNSNRIDCLPPDVTFTPVVTSAPVKETTTRKKHESFFDKLKERLLTETGEEGSLRCKNCGFESKCLSEHSVHEKTCLTQSNRAPANTLMSSLSSTRCQNCRHRCKSSADLYVHMKTCKKNEEEVKEIPTQTQDSSEAVDLNAEKEVEPHPMENVVFVWNNINTEANKFDTPLDISINDDSTLPEPPQSFDSENVDENEGMNLSPSQAVGKKVFKCPHCMFWASTASRFHVHIVGHLNKKPFECSQCKYKSNWRWDITKHIKLRSARDPNHTDAKVLMTDETGRRNYSKYNKFLAMPILNENGENEFHYIEPNTNVDASLDVDESYNDANELTNTSTDMQPLDLQTQHGDYKYSLDNRSEDMKRPKKTLWKCKKCNYRDSSKEALLEHVREHSKASSYNLDDAKSQQGGSGATKKPDNTTDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGVIKVVTTVKPKVEGSTLLNESVSDTCTKCPFKSSDKTMLIIHMQQHQPSPLSIFKCYFCPFFVKDEQELVQHLVLHGITDPEDYIAKAMGGKSPLNEQQGTTHTSSTKRHKCTECPYETNSKSQFMYHEQFHRLPADTPYKCPECNYSVSKRHLLHQHMRVHGIMSKKGEFEADFEASTSISYKTENKCDPNLDEIPYVWVSAKNEFHKMYKCRYCSYVNTQKCKIPNHEKIHCTVNAHNEVLVYKCLDCKFTCDNSGRLAEHSKTHGEIYGRIYCPVESDVPDEDQIAKLRKVIEEEKTNAADDFVKEECMTPENKVIKTLHFCQKCPARFFTDSELKIHDKFHDLSFPNKCRSCEFSTLHDVELAAHVFVHSDEYHTKTKMLKFIHNTDPTHPEPRLELVHCAATSEINWVVTHPGRNYDDMDISPKKSHEGKHIPKQYLCKECPAKFFKTSALNYHMSLHGGDGENKCKKCSYAVKNIGNLAKHELLHETDAKSTCDYESGDDMDYKNIPLSGTDLFQRKTEAQKRVLSDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQKNDEAVAERRKGCNGYLESEEPTGNKKDDSTENIKLAIKTMPKGIPKSDFQQFSISDQQTLRLLQRRCALNTSLNETNKSDATVTKDRKLHPCFLCPYTNQRQDALGNHFRRHDKNDNFSNGNHKCSFCDLAVVQSHFLRDHLKTHFNYQKNLTPECYVANEGVKFTITKLDDEDTVTDLKLDIQSKVDICNDEKVFVKIKTGELLVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01142052;
90% Identity: -
80% Identity: -