Pdem014715.1
Basic Information
- Insect
- Papilio demoleus
- Gene Symbol
- Rel
- Assembly
- GCA_029286655.1
- Location
- JAGSMY010000019.1:3298501-3319629[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.1e-36 2.3e-32 112.9 0.4 1 168 59 227 59 228 0.86
Sequence Information
- Coding Sequence
- ATGTCTGCAAGTGAGCCAGATATAAGCGAGTCCTCCAATTTGGAGTCGCCATCTCCCCAGTCCAATTCTCCGTATAGTTCTCCATCACAACAGGTGCCCCAGTTGGCGAGCTTCTTGACAGTTCTGTCCTGCGGAGACACTACGTTTAATTATGATACCGGAAAAAAACCATTTCTTCGAATTATCGAACAGCCGCAGAATCATTTTAGGTTTCGATACAAAAGTGAAATGGTAGGGACACATGGTAGTCTTCTGGGAAAATCATATgctgttaataaaacaaaaacacatcCAACAGTAGAGCTGGTCAACTACAGTGGACAAGCAAGAGTGAGATGTCGCTTAGCGCAGCATAATAATTCGGACGAGCATCCTCACAAGTTGCTAGAAGAAGACCAAGACAGGGATGTGAGCGCTATAGTTCCTGAACATGGCAGTTATAAAGTTGGATTTCCTGGTATGGGTATAATACATACAGCTAAAAAGGATGTAGcaaatttattgtacaaaaaatatgaaagtaattGGAAAAGTCCGCAAGACGAAAATAagctCCGTTTGCATTGTGAAAACATTGCAAAAAATATCAACTTGAATATAGTGAGACTGAAGTTTAGCGCTCACGATTATAATACGGATGAAGAGATCTGTAGTCCCGTATTTTCGGAACCTATACATAATATGAAGAGTGCAGCGACAAATGATTTGAAGATTTGTCACATGAGCAGATGCATAGGTCGACCTAAAGGTGGAGATGACGTCATTATATTGGTGGAGAAAGTCAACAAAAagaatATAAAGATTCGTTTCTACGAATTAGGAAAGAATGGAGAAGAATGTTGGTCAGCGGAGGGTCACTTCTTACAAAGCAATGTGCACCATCAATATGCTATTGTTTTTaggaCTCCTCCGTATAGAGACCCTGATATAACTTCAGATGTACAAGTAATGATAGAGTTGTTGAGGCCGTCTGACGGGCGCACCAGTGAGCCCAAAGAGTTTACTTATAAAGCAAAATATGTCAACACTATAGGAAAGAAAAGGAAAGCAAATTCATCATATTCGTCCATCGGGAGCTCTggcGGTTCATTAAACAGTCTAAGTGATCTGCCGGTGCCTATACAAATGATGaatCAAAAGAACGATGTTATATCTCACGATGAAGTTATGAAAGATCTACAGTTGTTTACTATACcgGTATCTCAAACAACGGGACCTGTGTCAAATGATATGTTATTGGGCGAGGCAATGTTTGATTTGACATCTTTGAACGAGTCCGGCCATACGGCACAGTTCAACGTGCCCATGCTGGGCCAGCCCAACATACCTGAGCCGCCGGTCCTGCAGCTCAACTCCTCAGAAATTGAACGATTGATCAAACATAACTCAAATATCACCGCAGAAGAGAAGAAACAGTTTTGCGAAGTTGATTGGACAgattacttCAAATCGTACGGCGACAGCGTGCCAGatatgATGACCGGCATGGAGTTCATAAGATTGGTGCCAGACTCCGCCAGGGTAAATATGAAGAGTGGAGCCACATCACCTAAGAATATGAAAACTGGTGACGATGAAGTAAAAACTAGCCACGAAAATTCAAAGAACAACGAATATTCAGCTTACTACAAATCTGAGGACGGCATAGAAGTAAAgaagCTTGTGACGGAATTATGTGACATGATAAAGAATAAGACCGCACATAAGAAGCAATTGGTCAGAGCTAAGCTCGAGCGACTTTTCGAAATGCGACTCTCTAATGGAGACACGTTCTTACACATGATGTTGTCCAGCAACCAGCCCAGCCTGGAGTACATAGTAAAGCTGGTAGACAGCGTCAAGTTGACGCATTTATTAAACAAGACCAACAACTACGGCCAGACTGTGTTACATCTCGCTATCACGCACGAATTACCCAAGCTTGTCACATTTCTCGTCTCCAAAGGTTGCAACCCCATGATCGAAGATAATGAGGGTAACAATGTGATACACTACGCGGTGATCTGTAACTCGTGCTTGTCGCCCTTACTGGACACTATGAAGACACATAATAtcacttttgacatcaacGCTTATAATAATGAGAAGCAGACCGCGCTGCATCTGGCCGCTATCTACGGGTCCGCGGAGAGTGCGCGCGTGTTGGTCGCACACGGCGCGTCGCTGCGAGCGCGAGACAGCGAGGCTCGCACCGCGCTACACCTCGCCGCATACGATGACTGCCTCGTCGTACTGCAAGCGTTGTTAGAACACGCGCATGCCAGCGACATAGACGCGGTGGACGGGCGAGGCAACACCGCGCTGCAGATCGTCTGCGGCGGCGCCATGAGGGACAACTCTGTCGAAATCGTCAAACTGCTTAtggataaaaatgcAAACCCTAATAAGAATGAAGAAAATAAGACGCCGGCGTGGCGCATGGCGCGCGACAAGCCGCCGCTCTACCAGGTGTTCAGGACCTATATCCCGCAGCTCATGGACTGCGACGACGACATCAAGTCCGAGCCAGAAGACGACTACGAATCCGCTGATGACGGGGACGCAGCAGAGAGTTGCCTGTCGGAGCTGAGCCTGTACGTGGAGGAGGTGTCGAAGGTGTTGGACGCGAGCGGCGGGTGGCGCGAGCTGGCGCAGCGACTGCAGCGCGACTCCCTGCTCTCCTGGTACTCCGCCTCGCCCAGCCCTACCAGGAAACTACTCACATACATCAAGGATTGTGAAGATGATATAACATCAAAGTCGTTGGCATTACTTCTAGAAGACATGGGACAGAAGGAGGCGGCGAGTATCATCAGACGATACCTCACCAGCTGA
- Protein Sequence
- MSASEPDISESSNLESPSPQSNSPYSSPSQQVPQLASFLTVLSCGDTTFNYDTGKKPFLRIIEQPQNHFRFRYKSEMVGTHGSLLGKSYAVNKTKTHPTVELVNYSGQARVRCRLAQHNNSDEHPHKLLEEDQDRDVSAIVPEHGSYKVGFPGMGIIHTAKKDVANLLYKKYESNWKSPQDENKLRLHCENIAKNINLNIVRLKFSAHDYNTDEEICSPVFSEPIHNMKSAATNDLKICHMSRCIGRPKGGDDVIILVEKVNKKNIKIRFYELGKNGEECWSAEGHFLQSNVHHQYAIVFRTPPYRDPDITSDVQVMIELLRPSDGRTSEPKEFTYKAKYVNTIGKKRKANSSYSSIGSSGGSLNSLSDLPVPIQMMNQKNDVISHDEVMKDLQLFTIPVSQTTGPVSNDMLLGEAMFDLTSLNESGHTAQFNVPMLGQPNIPEPPVLQLNSSEIERLIKHNSNITAEEKKQFCEVDWTDYFKSYGDSVPDMMTGMEFIRLVPDSARVNMKSGATSPKNMKTGDDEVKTSHENSKNNEYSAYYKSEDGIEVKKLVTELCDMIKNKTAHKKQLVRAKLERLFEMRLSNGDTFLHMMLSSNQPSLEYIVKLVDSVKLTHLLNKTNNYGQTVLHLAITHELPKLVTFLVSKGCNPMIEDNEGNNVIHYAVICNSCLSPLLDTMKTHNITFDINAYNNEKQTALHLAAIYGSAESARVLVAHGASLRARDSEARTALHLAAYDDCLVVLQALLEHAHASDIDAVDGRGNTALQIVCGGAMRDNSVEIVKLLMDKNANPNKNEENKTPAWRMARDKPPLYQVFRTYIPQLMDCDDDIKSEPEDDYESADDGDAAESCLSELSLYVEEVSKVLDASGGWRELAQRLQRDSLLSWYSASPSPTRKLLTYIKDCEDDITSKSLALLLEDMGQKEAASIIRRYLTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01141417; iTF_01144330; iTF_01149347; iTF_01147878; iTF_01138736; iTF_01142897; iTF_01147198;
- 90% Identity
- -
- 80% Identity
- -