Pdem004820.1
Basic Information
- Insect
- Papilio demoleus
- Gene Symbol
- Bgb
- Assembly
- GCA_029286655.1
- Location
- JAGSMY010000006.1:5895453-5901601[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.1e-15 2.2e-10 41.0 0.2 1 27 33 59 33 60 0.98 2 2 9.3e-33 2.5e-28 99.4 0.3 93 164 58 129 56 132 0.96
Sequence Information
- Coding Sequence
- ATGCACGCCATGGGTGACCCCGCTGCGTTGGCCGGCATGTTACCTTTTGACTCGATAGGGCTGTACGAGCAGCCGAAGCCTCGCTTCATCTTCAAGATGCCGCGGGTGGTGCCAGATCAGAAAGCCAAGTTCGAATCTGATGACCTGTTCAAGAGACTGAGCAGAGAAAGCGAGGTACATATCGTATCCCGATTTATAATGAATGGTGTTTGCGTCCGATGGCGGGGTTCGATCGATTTGGAGAAACTCGAAGGGATCGGTTGCTTGGAGCTAGATGAGGAGAGGGCGGCAATCGAGGATGCGGCTTTGAGAGACCAGATTGAACGTTATAATCAGAGGCTCAGGGACTTCGAGGACAAGCAGCGCGCGTACCGCGAGCATGGGGAGGAGTTGCGCGCGCATTCCCACGTACATGCGCAGCGTTTCCACCAGTCGAGGCAACCTCCCCATGGAGCCAACCCGACGCACCCCCACGCAGCTCACCCTGTACACATAAAGCCGCATTCACAAGGAGCTCTTATATCATAA
- Protein Sequence
- MHAMGDPAALAGMLPFDSIGLYEQPKPRFIFKMPRVVPDQKAKFESDDLFKRLSRESEVHIVSRFIMNGVCVRWRGSIDLEKLEGIGCLELDEERAAIEDAALRDQIERYNQRLRDFEDKQRAYREHGEELRAHSHVHAQRFHQSRQPPHGANPTHPHAAHPVHIKPHSQGALIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01142173;
- 90% Identity
- -
- 80% Identity
- -