Basic Information

Insect: Papilio dardanus
Gene Symbol: stc
Assembly: GCA_013186455.1
Location: QDHC01003352.1:69812-78757[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.6 1.5e+04 -3.8 1.6 15 19 408 412 407 412 0.81

2 13 0.088 8.4e+02 0.2 0.8 4 10 442 448 440 448 0.91

3 13 2.6e-05 0.25 11.5 18.1 4 19 456 471 454 471 0.93

4 13 3.3e-08 0.00031 20.8 14.0 1 19 507 525 507 525 0.98

5 13 5.4e-06 0.052 13.7 12.2 1 19 566 584 566 584 0.99

6 13 1.6e-07 0.0015 18.6 13.8 1 19 625 647 625 647 0.88

7 13 2 1.9e+04 -4.8 2.2 6 10 677 681 677 681 0.94

8 13 0.011 1e+02 3.2 7.3 1 11 687 697 687 698 0.93

9 13 0.041 3.9e+02 1.3 0.6 4 10 702 708 701 708 0.92

10 13 2.6e-06 0.025 14.7 14.0 3 19 716 732 714 732 0.92

11 13 2 1.9e+04 -4.9 1.8 9 12 760 763 760 765 0.60

12 13 0.00025 2.4 8.4 9.0 9 18 778 787 776 788 0.92

13 13 4.7e-08 0.00044 20.3 10.6 1 16 824 839 824 840 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.6	1.5e+04	-3.8	1.6	15	19	408	412	407	412	0.81
2	13	0.088	8.4e+02	0.2	0.8	4	10	442	448	440	448	0.91
3	13	2.6e-05	0.25	11.5	18.1	4	19	456	471	454	471	0.93
4	13	3.3e-08	0.00031	20.8	14.0	1	19	507	525	507	525	0.98
5	13	5.4e-06	0.052	13.7	12.2	1	19	566	584	566	584	0.99
6	13	1.6e-07	0.0015	18.6	13.8	1	19	625	647	625	647	0.88
7	13	2	1.9e+04	-4.8	2.2	6	10	677	681	677	681	0.94
8	13	0.011	1e+02	3.2	7.3	1	11	687	697	687	698	0.93
9	13	0.041	3.9e+02	1.3	0.6	4	10	702	708	701	708	0.92
10	13	2.6e-06	0.025	14.7	14.0	3	19	716	732	714	732	0.92
11	13	2	1.9e+04	-4.9	1.8	9	12	760	763	760	765	0.60
12	13	0.00025	2.4	8.4	9.0	9	18	778	787	776	788	0.92
13	13	4.7e-08	0.00044	20.3	10.6	1	16	824	839	824	840	0.96

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAATTCTTACGGCTACAACAACCAATTTCAAGTACCGCCTAATTCGTGGAATAGAGATTTAAATGGGCAATATGTAAATCAACCATACTATGACAATAGACAGTATGATTCAAACAACCAATATGTAAGTTTTGATGAATTTTTAACACAAATGCAGGGTAATGGTGTTCCACAAAGTAATAattctaattataataatgtacagTACCAAGCATACCCAACTAACCAATACAACTATCAGAATGTACCATCACAAGATCCACAGATGGAATTCAGTTATGGACACCACAACCCTAATGCAAGTAATACATTAGATGCTTATCCGGTCAATGTTCAAAATCAATACAACCCATCTCCACCAGAATTAAGTTCTTattctaatgaagtcgtaatCAATTCAAAGTTGACAGCGACTGCAACAGAATTTGTGCCAAAATGTTCTGCAAATGTAGCCTCCACTTCTCAAAGCACTCCGCAAGATACTTTAATCACGCACAATGATGAACCTGATAATAGAAGCAGTACTGCTAAATCATCAGAAAGCAATTGGAGAGAAAGACCGAGCAACAGTGATACAAGCAACATCCAAgttgaaacaaataattttagtcgatatcaaaaaaattataaaaacacagAAGGTAATAATCGTAATCGTGATTCTAATAatagatatgaaaataaacgTAATGAACCGAACCATGAATCGAATGGACGCTACCGTAATGGACATAGTAATAGTTATCAATCAAATCAACCAAAGGAATCAACAATCCAAAATAAAGAATCAGAAAACCCGTCTAACGATTCCTATAATCAAAACGAAAATCATCGAAATTTCGAAGCGGGAAATCGAAATGAAACTAGAAGATATGcaaatgaaaatcaaaaatctaATTCTAAATCGAAAAATAAAGATACCGACGCAGGTCGGACGTTTTATAACAgctctataaataaaagtagtcaAGATGTTAGGAATGGCAGGGGAGAAAGTTCCGGAAGAAATAGAAATTGGATCGGCAGTCAACGTCTCCGGACAGCAGAACGTAATAATGTTGAAGATGAACAATATGCTAATACATACATGCATTATAAAGATGATAGAGGTGAACGAGTCGCAAGTAGTAGCAAAAGTGAAAAAACCACTAGCCCGGTGAAAGGAAGAAATAAACCTACCAATGACTCGGGAGAAGGTAAATGGAGATGTCCGGCATGTCAAAACACGAATGAAGATATACCAACTGAGTACCGTTGTATGTGCGGTGCTGTTAAATCACCGGAGTACTCTCGTGGCTCGGTGAGCGCTCATACTTGTGGCAAGTCGTGCCGCCGGCCGAGGAACTGCCCGCATCCCTGCACTTTGCTATGCCATCCCGGACCCTGTCCACCATGTCAGGCTACTATCAGCAAGCAATGTGGTTGCGGTGCTGAGACCCGCTCAGTGCTGTGCAGCAGTAAGCTGGCGCAGCTTTGCGGGCGCGAGTGCCGCCGCAAGCTGCCCTGCGGGGCGCACGAGTGCCAGAGAGAATGTCACGAAGGACCATGTGATGAATGCTCTGAGATTGTCGTACAAgTGTGCTTCTGCCCCGCGGCAAAGACGCGGTCCGTGCCATGCACGTCGGAGACCAGCGGTGAACCCGCGTGGTCGTGCGGCGCTGCGTGCGCGCGCGTGCTGTCGTGCGGCGCGCACGTGTGCCGGCGCGTCTGCCACGCCCCGCCCTGCGCCCCCTGCCCCTTGCGACCTGACAACGTGCGCTCCTGCCCCTGCGGGAATACTAAgaTTGAAAAAGATCAACGGAAGTCGTGCACAGATCCGATTCCTTTGTGCGGTAATATCTGCGCCAAACCACTGTCCTGTGGTCCGGAAGGAGATAAACACTTTTGTAAACAATTGTGTCATGAagGTCCGTGTCCGACGTGTCCCGATAAGACACTATTGCCGTGCCGATGCGGGCACTCAAGTCGCGAAGTGCCCTGTTCAGATCTGCCCGAAATGCTCAATAATATCTTCTGCCAGAAGAAATGTAATAAGAAATTGTCATGCGGCCGTCACCGTTGCCGCACGGCGTGCTGCGCGGCGCAGTCGCACCGGTGCGCGGTGGTGTGCGCGCGCATGCTCTCCTGTCAGCTGCACCGCTGCGAGGAGTTCTGTCACACGGGACACTGCGCGCCCTGCCCCCGCGTCAGTTTCGAAGAGCTGCATTGTGAGTGCGGGACCGAAGTCCTATTACCACCTATCCGTTGCGGCACCCGTCCGCCGGTGTGCCACGCCCCCTGCCGGCGGGTGCGCGCCTGCCGCCACCCCCCGCACCACGCCTGCCACACCGGGGACTGTCCGCCATGCGTAGTCCTCACCACAAAGATGTGTCATGGACAACACGAGGAGCGCAAGACGATCCCGTGCAGCCAGGAGGAGTTCTCGTGCGGTCTGCCGTGCGGCAAGCCGCTGCCCTGCGGCAAGCACGCCTGCACCAAGACATGCCACAAGGGACCGTGTGATACTGACAaCAGAGGTGCTGGAGGTTGGGCGACACTGACGTCCACGAACGCGTGGGCGGCGCGCAGCCAGCCGCGCTCCGAGCCCAAGATCGACTACTTTGACAACCCCCCTGACAACTAA
Protein Sequence: MSQWNNSYGYNNQFQVPPNSWNRDLNGQYVNQPYYDNRQYDSNNQYVSFDEFLTQMQGNGVPQSNNSNYNNVQYQAYPTNQYNYQNVPSQDPQMEFSYGHHNPNASNTLDAYPVNVQNQYNPSPPELSSYSNEVVINSKLTATATEFVPKCSANVASTSQSTPQDTLITHNDEPDNRSSTAKSSESNWRERPSNSDTSNIQVETNNFSRYQKNYKNTEGNNRNRDSNNRYENKRNEPNHESNGRYRNGHSNSYQSNQPKESTIQNKESENPSNDSYNQNENHRNFEAGNRNETRRYANENQKSNSKSKNKDTDAGRTFYNSSINKSSQDVRNGRGESSGRNRNWIGSQRLRTAERNNVEDEQYANTYMHYKDDRGERVASSSKSEKTTSPVKGRNKPTNDSGEGKWRCPACQNTNEDIPTEYRCMCGAVKSPEYSRGSVSAHTCGKSCRRPRNCPHPCTLLCHPGPCPPCQATISKQCGCGAETRSVLCSSKLAQLCGRECRRKLPCGAHECQRECHEGPCDECSEIVVQVCFCPAAKTRSVPCTSETSGEPAWSCGAACARVLSCGAHVCRRVCHAPPCAPCPLRPDNVRSCPCGNTKIEKDQRKSCTDPIPLCGNICAKPLSCGPEGDKHFCKQLCHEGPCPTCPDKTLLPCRCGHSSREVPCSDLPEMLNNIFCQKKCNKKLSCGRHRCRTACCAAQSHRCAVVCARMLSCQLHRCEEFCHTGHCAPCPRVSFEELHCECGTEVLLPPIRCGTRPPVCHAPCRRVRACRHPPHHACHTGDCPPCVVLTTKMCHGQHEERKTIPCSQEEFSCGLPCGKPLPCGKHACTKTCHKGPCDTDNRGAGGWATLTSTNAWAARSQPRSEPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01147786;
90% Identity: -
80% Identity: -