Basic Information

Insect: Papilio dardanus
Gene Symbol: Znf711
Assembly: GCA_013186455.1
Location: QDHC01004254.1:890647-898556[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.7e-05 0.0021 18.5 1.3 1 23 184 206 184 206 0.97

2 10 0.00076 0.061 13.9 2.6 1 23 213 235 213 235 0.98

3 10 7.9e-05 0.0063 17.0 2.4 1 20 267 286 267 287 0.96

4 10 0.0035 0.28 11.8 2.6 2 23 296 318 295 318 0.97

5 10 8.7e-05 0.0069 16.9 1.1 3 23 333 353 331 353 0.95

6 10 2.4e-05 0.0019 18.6 1.0 1 21 359 379 359 384 0.94

7 10 0.0003 0.024 15.2 0.2 3 23 394 415 392 415 0.95

8 10 3.3e-06 0.00027 21.3 0.9 1 23 421 444 421 444 0.97

9 10 1.1e-05 0.00086 19.7 1.9 1 23 453 475 453 475 0.99

10 10 0.0004 0.032 14.8 0.2 1 23 481 504 481 504 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.7e-05	0.0021	18.5	1.3	1	23	184	206	184	206	0.97
2	10	0.00076	0.061	13.9	2.6	1	23	213	235	213	235	0.98
3	10	7.9e-05	0.0063	17.0	2.4	1	20	267	286	267	287	0.96
4	10	0.0035	0.28	11.8	2.6	2	23	296	318	295	318	0.97
5	10	8.7e-05	0.0069	16.9	1.1	3	23	333	353	331	353	0.95
6	10	2.4e-05	0.0019	18.6	1.0	1	21	359	379	359	384	0.94
7	10	0.0003	0.024	15.2	0.2	3	23	394	415	392	415	0.95
8	10	3.3e-06	0.00027	21.3	0.9	1	23	421	444	421	444	0.97
9	10	1.1e-05	0.00086	19.7	1.9	1	23	453	475	453	475	0.99
10	10	0.0004	0.032	14.8	0.2	1	23	481	504	481	504	0.96

Sequence Information

Coding Sequence: ATGGATTTAATTAACGAAGAAATATCTTCCTGCTGTATAGATGCTCTCTCTCTATGCTTTATCTGCAAAAAACTTGTACAAAACGCAGAATGTCTAATAGagaaaattatcaataataaaaatgaagttaatttaaataatGTCTCAGAGAAAACAATAGATATGGTACAAACATTcaatatagaaatattagaTACTATTGAATTATCCGGTAATGAACAAACGGAAGaaccaatttttatttataaatatggtaTTTACAAAGAATGTgtagttaaaaatgaaattaaattcgaAGATGATTTTCATGACGATGACTTTATGGgtatacaaataaatgtaaaaaatgaaCTCTCAGATAATAATTCAGAATGTGAAACtgattttaatgatttaaaaataataaagaagactattaaaaagaaaaaaggtagaaaaagaaaaactacaacagaattaacaatgataaaaacgttgtatataaataaagaacaatTAAAGCAAGAGAGAGATATAATGGCTAatgaaaaaacatatattaatagtGCATATAAATGTACAGATTGTGTTAAAGGTTTcgcatataaatatacatatgaaaaacatatGGATTTACATAGTAAGGATAAAGgtgattttgtttgtaaaatatgtaaacaaagaATGAATACAAAAGATAAATTGTATAGACAtcaaaaaatacatcaaattcgttataaatgtttaatatgtgGCATAATACAAAAGAACAATATGAGAGATCATTACAATACTCACCATTCTAAAGTATCAgtacattataaatgtaaaacttgCCCAAAGACATTCAcagatagattttatatgagaaaacatgtatatttttgtagtaaagaCACGCGTGTGACTTGCGCGCATTGCATGAAAACTTactctaataaaaatgtattgaaaactCATATACAAacGAGACATCCAACAGTACTGCCGCCAACGggaaaaaagaaaactatagATTGCAAAAATTGCGGTAAAACGTTCCAAAATCCCTCGCGACTGAAGCTACACAGTCTGAAACATTCCACAGAGAGGAGGTATTATTGTGTCGAATGTGACAAaagtTATAAAACTGAATATACACTAAAGCAACATTTAAAACTGGCTTTGCGACATGTCAACCCTAGCGAGTTACATCTCGCTTGTGAGCAGTGCGACAGAAGATTCGGTGTCAAACGAGACTTGGTGCGTCACGTGAACAGGATACATCTAAATATAAGACCTTTTAAATGTGATTTATGTgaaaaggCATTCAGTAATAGTTGGGGTctaaagaaacataaaaagatTTCTCATGAAGGATACAAGAGGCCATATATATACCCTTGCACTATGTGTGATAGAATGTTTCATCAAAAATCAATACTTAAAGCGCATATACGCACGCACACCGGCGAGCGACCGTACCAATGTGCAAGATGTCCGGCGAAGTTCACGCAGTCCAGTGCTCTCGGCACACACACAAAATTAGTACATCTCAAGCAAACGAGAGATGGAAAACCGAAAAACCTCAAATAA
Protein Sequence: MDLINEEISSCCIDALSLCFICKKLVQNAECLIEKIINNKNEVNLNNVSEKTIDMVQTFNIEILDTIELSGNEQTEEPIFIYKYGIYKECVVKNEIKFEDDFHDDDFMGIQINVKNELSDNNSECETDFNDLKIIKKTIKKKKGRKRKTTTELTMIKTLYINKEQLKQERDIMANEKTYINSAYKCTDCVKGFAYKYTYEKHMDLHSKDKGDFVCKICKQRMNTKDKLYRHQKIHQIRYKCLICGIIQKNNMRDHYNTHHSKVSVHYKCKTCPKTFTDRFYMRKHVYFCSKDTRVTCAHCMKTYSNKNVLKTHIQTRHPTVLPPTGKKKTIDCKNCGKTFQNPSRLKLHSLKHSTERRYYCVECDKSYKTEYTLKQHLKLALRHVNPSELHLACEQCDRRFGVKRDLVRHVNRIHLNIRPFKCDLCEKAFSNSWGLKKHKKISHEGYKRPYIYPCTMCDRMFHQKSILKAHIRTHTGERPYQCARCPAKFTQSSALGTHTKLVHLKQTRDGKPKNLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01140350;
90% Identity: iTF_01140350;
80% Identity: iTF_01140350;