Pdar013022.1
Basic Information
- Insect
- Papilio dardanus
- Gene Symbol
- Znf711
- Assembly
- GCA_013186455.1
- Location
- QDHC01004254.1:890647-898556[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 2.8 6.6e+03 -2.7 0.4 15 21 27 33 19 45 0.52 2 10 0.0063 15 5.8 1.1 5 27 201 223 198 231 0.87 3 10 1.4 3.2e+03 -1.7 5.4 2 43 227 260 226 261 0.74 4 10 2.3 5.4e+03 -2.4 2.9 16 27 266 277 255 279 0.75 5 10 5.8e-09 1.4e-05 25.1 6.3 5 44 284 319 282 319 0.96 6 10 0.032 76 3.5 1.6 13 28 327 342 321 353 0.80 7 10 0.28 6.8e+02 0.5 1.8 6 40 349 379 344 385 0.77 8 10 0.012 28 4.9 0.8 17 38 421 439 406 444 0.77 9 10 2.2 5.2e+03 -2.3 0.1 19 41 455 474 452 476 0.72 10 10 0.33 7.7e+02 0.3 0.4 17 40 481 506 466 509 0.77
Sequence Information
- Coding Sequence
- ATGGATTTAATTAACGAAGAAATATCTTCCTGCTGTATAGATGCTCTCTCTCTATGCTTTATCTGCAAAAAACTTGTACAAAACGCAGAATGTCTAATAGagaaaattatcaataataaaaatgaagttaatttaaataatGTCTCAGAGAAAACAATAGATATGGTACAAACATTcaatatagaaatattagaTACTATTGAATTATCCGGTAATGAACAAACGGAAGaaccaatttttatttataaatatggtaTTTACAAAGAATGTgtagttaaaaatgaaattaaattcgaAGATGATTTTCATGACGATGACTTTATGGgtatacaaataaatgtaaaaaatgaaCTCTCAGATAATAATTCAGAATGTGAAACtgattttaatgatttaaaaataataaagaagactattaaaaagaaaaaaggtagaaaaagaaaaactacaacagaattaacaatgataaaaacgttgtatataaataaagaacaatTAAAGCAAGAGAGAGATATAATGGCTAatgaaaaaacatatattaatagtGCATATAAATGTACAGATTGTGTTAAAGGTTTcgcatataaatatacatatgaaaaacatatGGATTTACATAGTAAGGATAAAGgtgattttgtttgtaaaatatgtaaacaaagaATGAATACAAAAGATAAATTGTATAGACAtcaaaaaatacatcaaattcgttataaatgtttaatatgtgGCATAATACAAAAGAACAATATGAGAGATCATTACAATACTCACCATTCTAAAGTATCAgtacattataaatgtaaaacttgCCCAAAGACATTCAcagatagattttatatgagaaaacatgtatatttttgtagtaaagaCACGCGTGTGACTTGCGCGCATTGCATGAAAACTTactctaataaaaatgtattgaaaactCATATACAAacGAGACATCCAACAGTACTGCCGCCAACGggaaaaaagaaaactatagATTGCAAAAATTGCGGTAAAACGTTCCAAAATCCCTCGCGACTGAAGCTACACAGTCTGAAACATTCCACAGAGAGGAGGTATTATTGTGTCGAATGTGACAAaagtTATAAAACTGAATATACACTAAAGCAACATTTAAAACTGGCTTTGCGACATGTCAACCCTAGCGAGTTACATCTCGCTTGTGAGCAGTGCGACAGAAGATTCGGTGTCAAACGAGACTTGGTGCGTCACGTGAACAGGATACATCTAAATATAAGACCTTTTAAATGTGATTTATGTgaaaaggCATTCAGTAATAGTTGGGGTctaaagaaacataaaaagatTTCTCATGAAGGATACAAGAGGCCATATATATACCCTTGCACTATGTGTGATAGAATGTTTCATCAAAAATCAATACTTAAAGCGCATATACGCACGCACACCGGCGAGCGACCGTACCAATGTGCAAGATGTCCGGCGAAGTTCACGCAGTCCAGTGCTCTCGGCACACACACAAAATTAGTACATCTCAAGCAAACGAGAGATGGAAAACCGAAAAACCTCAAATAA
- Protein Sequence
- MDLINEEISSCCIDALSLCFICKKLVQNAECLIEKIINNKNEVNLNNVSEKTIDMVQTFNIEILDTIELSGNEQTEEPIFIYKYGIYKECVVKNEIKFEDDFHDDDFMGIQINVKNELSDNNSECETDFNDLKIIKKTIKKKKGRKRKTTTELTMIKTLYINKEQLKQERDIMANEKTYINSAYKCTDCVKGFAYKYTYEKHMDLHSKDKGDFVCKICKQRMNTKDKLYRHQKIHQIRYKCLICGIIQKNNMRDHYNTHHSKVSVHYKCKTCPKTFTDRFYMRKHVYFCSKDTRVTCAHCMKTYSNKNVLKTHIQTRHPTVLPPTGKKKTIDCKNCGKTFQNPSRLKLHSLKHSTERRYYCVECDKSYKTEYTLKQHLKLALRHVNPSELHLACEQCDRRFGVKRDLVRHVNRIHLNIRPFKCDLCEKAFSNSWGLKKHKKISHEGYKRPYIYPCTMCDRMFHQKSILKAHIRTHTGERPYQCARCPAKFTQSSALGTHTKLVHLKQTRDGKPKNLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01140382;
- 90% Identity
- iTF_01140382;
- 80% Identity
- iTF_01140382;