Pcly043535.1
Basic Information
- Insect
- Papilio clytia
- Gene Symbol
- -
- Assembly
- GCA_018247735.1
- Location
- DWGS01054249.1:1-1151[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.21 2.6e+03 -0.8 0.2 58 102 43 92 28 102 0.68 2 2 1.2e-66 1.6e-62 213.1 4.5 19 275 106 380 95 380 0.94
Sequence Information
- Coding Sequence
- ATGCTCACATCTACGAGTGGCATCATGACACCGACGACAGGAACTGCCACGCCAGAGTCGACAGAAGTGATAGAGGCAAGGAAACTTGTCAAAAGAGCGCAAGCAGACTTGTTAGCCTTTTCTGACGAATGGAAGAGCTTGCAAGAGAGGAAGACGTGGATAGACCTCGAGCTCAAGGAAAAGGAACAGGAGATGGACGATTTACGGTCGGATTTCGAGAGGTTACAGGTCTTTTCTGAGTTGGTCAGCGGAGAGCTTGCAACAGCCGACTGGGATCAAATTATCGGGTGCTTGAAGAAGGCCCTCGAACTCAAAGCTACGACATCAGAGATTGCAGACATTGCTGTTGCAGCTATCCATCCTTTCCTTCGAGAAGGAGACTGGGATCTCTTGGAAGAACCAACACGCTTCGCTTCAGATCTCAAAGAACTAAAATCACTACTCATGCCATCGGCAACAAATGGCAAGTCTGTCGGGAAATGGGATTCTTCGGCAGCAGTCAATACGGACGACATCTACCGCCGTCATCACAAATCCACAACGCCGTACGAAAGCATGATGTACAAGAATTGGCTACCCAAAGCACTCGCGGCTGTTCGGTCCTGGGATGTCTTTGAACCAGAGAAAATGCTTAGCGTCATGGAGGCCTGGGATGACCTCCTACCATCGTTTGTCCGCGTGCAGTTCATCGACAACATCGCCCGGAAGTTGGAAACAGCAGTATCAGACTGGAATCCCAAGAACAGGCGCCAGCACCACAGTCTACCGCACATATGGCTCTTCCCTTGGCTTCAATACCTTCCCTCGTACCATCTCGACCCCAAGGGAACGGGCCTGGTAGCAGACGTCAAGAGAAAGTTCAGACAACTCATCGACGTATGGGATTTCAAGGAGGGTCGCTTACCCGGTCTTACCAAATGGGAACGCATTCTCGGCGATCAATGGCGACCACTGGTAATGTCTCACGTCCTCCCGTCAATGGGCAAATATCTCCAGCGAAACTTCGCAGTCGAGCCAGCAGATCAGGAACCGAGTCTTCCTGTGCTCAGGGGTATTCTGAAATGGACGCCCACGCTCGGCCGAAGGGTTATTGCCGAGGTGCTGATACAGCACTTGTTCCCCAAGTGGCACAAGACGCTGACGGAGTGGCT
- Protein Sequence
- MLTSTSGIMTPTTGTATPESTEVIEARKLVKRAQADLLAFSDEWKSLQERKTWIDLELKEKEQEMDDLRSDFERLQVFSELVSGELATADWDQIIGCLKKALELKATTSEIADIAVAAIHPFLREGDWDLLEEPTRFASDLKELKSLLMPSATNGKSVGKWDSSAAVNTDDIYRRHHKSTTPYESMMYKNWLPKALAAVRSWDVFEPEKMLSVMEAWDDLLPSFVRVQFIDNIARKLETAVSDWNPKNRRQHHSLPHIWLFPWLQYLPSYHLDPKGTGLVADVKRKFRQLIDVWDFKEGRLPGLTKWERILGDQWRPLVMSHVLPSMGKYLQRNFAVEPADQEPSLPVLRGILKWTPTLGRRVIAEVLIQHLFPKWHKTLTEW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -