Basic Information

Insect: Papilio bianor
Gene Symbol: -
Assembly: None
Location: HiC:10826626-10846247[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.5 1e+02 3.5 0.4 3 23 117 137 115 137 0.95

2 17 0.19 13 6.3 0.3 2 23 141 163 140 163 0.93

3 17 5.5 3.6e+02 1.7 3.7 3 23 168 189 166 189 0.91

4 17 0.016 1.1 9.7 0.3 3 23 390 411 389 411 0.97

5 17 0.00098 0.065 13.5 0.2 1 20 419 438 419 439 0.97

6 17 0.0046 0.3 11.4 0.4 2 23 450 471 449 471 0.94

7 17 0.11 7.5 7.0 3.0 1 23 519 542 519 542 0.94

8 17 0.6 40 4.8 0.2 3 14 619 630 617 640 0.80

9 17 2.4e-05 0.0016 18.6 1.2 1 23 674 696 674 696 0.97

10 17 4e-05 0.0026 17.9 1.9 1 23 703 725 703 725 0.98

11 17 6.1e-05 0.004 17.3 2.3 1 23 730 752 730 752 0.96

12 17 0.00026 0.017 15.3 1.4 1 23 758 780 758 780 0.98

13 17 1.7e-06 0.00011 22.2 1.5 1 23 786 808 786 808 0.97

14 17 0.0011 0.076 13.3 1.1 2 23 815 836 815 836 0.98

15 17 0.00027 0.018 15.3 0.9 2 23 844 866 843 866 0.97

16 17 0.014 0.95 9.8 1.9 1 23 871 893 871 893 0.96

17 17 0.89 59 4.2 6.2 1 23 899 922 899 922 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.5	1e+02	3.5	0.4	3	23	117	137	115	137	0.95
2	17	0.19	13	6.3	0.3	2	23	141	163	140	163	0.93
3	17	5.5	3.6e+02	1.7	3.7	3	23	168	189	166	189	0.91
4	17	0.016	1.1	9.7	0.3	3	23	390	411	389	411	0.97
5	17	0.00098	0.065	13.5	0.2	1	20	419	438	419	439	0.97
6	17	0.0046	0.3	11.4	0.4	2	23	450	471	449	471	0.94
7	17	0.11	7.5	7.0	3.0	1	23	519	542	519	542	0.94
8	17	0.6	40	4.8	0.2	3	14	619	630	617	640	0.80
9	17	2.4e-05	0.0016	18.6	1.2	1	23	674	696	674	696	0.97
10	17	4e-05	0.0026	17.9	1.9	1	23	703	725	703	725	0.98
11	17	6.1e-05	0.004	17.3	2.3	1	23	730	752	730	752	0.96
12	17	0.00026	0.017	15.3	1.4	1	23	758	780	758	780	0.98
13	17	1.7e-06	0.00011	22.2	1.5	1	23	786	808	786	808	0.97
14	17	0.0011	0.076	13.3	1.1	2	23	815	836	815	836	0.98
15	17	0.00027	0.018	15.3	0.9	2	23	844	866	843	866	0.97
16	17	0.014	0.95	9.8	1.9	1	23	871	893	871	893	0.96
17	17	0.89	59	4.2	6.2	1	23	899	922	899	922	0.96

Sequence Information

Coding Sequence: ATGGTATCCGACGACTCCGATGATGAACCCTTGTCAGTTTTAGCTGCAGAGAAAAAACTACATCCCGAAAAATTCCCTAAACTTGAGGTTCAGAGCGAAGATGTCGACGTAGTTCCCAAAAAACGAAAGAGAAAGTCAATGACGCCAAAAAAACTAGGAATTACTATTAAAGTAAGAAAACAGAGGACTTTACAACCACCTCCTGTTGTAGAAAGACCTGCTGATGTTTGGCTCTATCTCAAAGATTTGAATGCCGCTGGTCCTTACAGCTGTTTACTATGTCCTGATTGGTTTATAAATAGATCCAAAATGATTATGCACTATGTATTAAATCATAAAAAAGATTTTTGTGGTATTTGCAGATATTTTGTACCAGATAGAGAGTCATGGCATGCACATGTCAAATTTCATATACCATGGCCATGCTCACAGTGTATTGCAAACTTTCCAAGCCAAGTCACACTGCGCCATCATCTAAGCAGTGCTCACAAACTTGTTCACTGTCGCTTATGTCATTTCCGTCTTCCTGACAATGACCAATATAATTCACATCTATTCCAAAAACACAATGTTATTAATGTGCTTTGTGATGAAGAAGTGCTATGGGTTTTTGATTACGAAGGCACAACGAAATTTTTATGTTTACTCTGCTCAAAGGGAAATAATCTCAGTTCATCATTTTTCAAACACTACATGGGTTATCATCATTTTACCATAAAGTGTCTTACCACTTTAGTTTCCGGGAAAGATCTTCCATTTACTGTTAATGGTGCAGATGTAAGTGCACACTTTATTGATGGACAATTACAAGGCCAAGTTCGTTATGGTTATGTTGATTTAGATAAAACTCCTTTAAATGCTATTAACCAGTCTGATGAACAAATCAATGAGAATTATAATTATTTGAAAACCGAAGTAAAACAAGAAGCTGGTAGTGATGGTGAAGTTAGAAGACAACTTGGTAATCAAGATACTAAAACCGAAGATCTTCATCAAAATTATAAAGGTGATGTAGATTTTGATGTGACCCTAACAGAAGTCATAGTTCTAGAGAAGTCCTACTTTGAATATGTAAACCGTACACTCAATGATATAAATAGTAACCAAATGCCTTTAAATTCTCTAATACAATATGAAGACAGTAAATCTGATACAATAGATGTTGACTGCCCATTATGTAAATCAAAGTATGAAAATGCCCAAACACTTATTATGCATATGAATAAAATGCATTGCATTAAGTTAGTTCCGTTGTATTCGTGCAGAGTTTGTACGACTACATTTGATACATACAGTGAGCTAGAAACGCACATCGGTCTCGAACTGGGCAACTTTGAGGACCTTTGGATCTGTCAGTTTTGTGACAAAGAGTTTGACGATCGAGATGCAACGAGAAAACATTTAACTGAACATTTGGAGGTTATGGAATATGATAATTGTTTCAGTCCACACTTGGGCTTTAAGTGTAGATTTTGTCCAATGCTGTTTTGGAACGAAACGGATCGGGAACAGCATCAAGTGAGAGTACATTTTGAGAAGTATGAAGATCAGTTTTATAGATGTGAAAGTTGTTCTGAACTATTTAGTGATAAAGTGTGGTTCATACATCATCATTTGGAGAAACATTTTGCCAATAAAATAACAAAATACCTAATGAAATGCTGTCTTTGTTGTATTGTTTTACCAAACATTGATGATATGAGAACCCATTTCATTGAGGACCATCCGGAGGCTCAGAAAGTTTACTGTTCCTTGGACTCATGCCAATATAAACCTTTAAGTCATAGGAAGTCATTTAAATTGCATGTAAAGACAATCCACAACGCGTCAGCGCGGGCGGAGAAGGTGGTTAACTGCACCATGTGTGGTCGCGAGTTCGCGAGTGCGCGGGCGTGCGGCGCCCACGTGGCACAAGTCCACGGCCCGGGCAAGTTCAAGTGCAAGCTGTGCCGGGATGTGCTGCACACCATGGACGAGAGAAAGCTTCATTATTTACTACGTCACCCTGGACGACACCCTTACGAGTGTGTCGACTGCGGCAAATCATTCCAGTACAAATCCTCATTGTATATGCATAGACAGGACCACATACCGAACAAACAGACGTACACATGCAACTACTGTTCTAAAGTTTTCATGAAAAAGGATTCGTTCCGCGAGCACGTGCAGATCCACGAGGGCCCGCGTCACGCGTGCTCGTACTGCCCCATGCGGTTCGTGCAGCGCTCCAACATGCTGCGGCACGAGCGCCGGCACACGGGCGAGCGGCCCTACGCCTGCCCGCACTGCCCGCGCACCTTCGCCGACAAGGGCGCCTGCAACTCACACGCCAGAACACATTCCAAAGAGACATCATTCGCCTGCCTGTACTGCGGTCAGACGTTTGTTCAAAAGTCCAAACTTACATATCATATAAGGAAACATACAGGAGAGAATTTGGAAACTTGTCCTGTTTGTTCCAAGTTGTTTACGAGTGGTTGTGCTTTACGTGAACATATGAAGATCCACGTCGCTAAGAAGGAACTAGTCAAATGTCCATTGTGTGACAAGAAGTACCAGGACGAGCGCTACATGCTGCGGCACCTGCGCACCACGCACGCGGGCGCGCAGCACGCCTGCCCGCTCTGCCACAAGCTGCTCACCAGCGCGCCCGGCCTGCGACACCACGTGCTCACGCACAGCGCGCTCAACATGTTCCACTGCAAATGCTGTCCGAAATCGTACGCAATCAAGAGGACTATGATAAGACATCTGCGCAAGCGTCACGGATTGAAAGGCACAGAGATCAATATAAAAGATTTCTTCAGACGATTGGACCCCAGAGAGTGTCAACTTGGCCTAGATGATGACACCATGGCCAATATATTTGGACCACCAAAGAAAGTTATGTCCGATGCATTACTAGCCGATTATATGAACTTGGCCAACCTTTATAGAAATAATATAAAAGAAGATGCTGATACTGAGAAAGAAAGTGATGATGATGATTCTGATGATGCTTCGTTACAAACATTAAAAAAGGATTATAATAATCCTGATCCGGAAAGTTCCAGAATTGAAAAGGTTACTATTAAACAAGAAACGGTTACAACAGATGTTGAATTGGAACCAACTGATTTTGTCAGTGTTAAAATAGAACCGTATGATGAGAACGAATGTGAATAA
Protein Sequence: MVSDDSDDEPLSVLAAEKKLHPEKFPKLEVQSEDVDVVPKKRKRKSMTPKKLGITIKVRKQRTLQPPPVVERPADVWLYLKDLNAAGPYSCLLCPDWFINRSKMIMHYVLNHKKDFCGICRYFVPDRESWHAHVKFHIPWPCSQCIANFPSQVTLRHHLSSAHKLVHCRLCHFRLPDNDQYNSHLFQKHNVINVLCDEEVLWVFDYEGTTKFLCLLCSKGNNLSSSFFKHYMGYHHFTIKCLTTLVSGKDLPFTVNGADVSAHFIDGQLQGQVRYGYVDLDKTPLNAINQSDEQINENYNYLKTEVKQEAGSDGEVRRQLGNQDTKTEDLHQNYKGDVDFDVTLTEVIVLEKSYFEYVNRTLNDINSNQMPLNSLIQYEDSKSDTIDVDCPLCKSKYENAQTLIMHMNKMHCIKLVPLYSCRVCTTTFDTYSELETHIGLELGNFEDLWICQFCDKEFDDRDATRKHLTEHLEVMEYDNCFSPHLGFKCRFCPMLFWNETDREQHQVRVHFEKYEDQFYRCESCSELFSDKVWFIHHHLEKHFANKITKYLMKCCLCCIVLPNIDDMRTHFIEDHPEAQKVYCSLDSCQYKPLSHRKSFKLHVKTIHNASARAEKVVNCTMCGREFASARACGAHVAQVHGPGKFKCKLCRDVLHTMDERKLHYLLRHPGRHPYECVDCGKSFQYKSSLYMHRQDHIPNKQTYTCNYCSKVFMKKDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYACPHCPRTFADKGACNSHARTHSKETSFACLYCGQTFVQKSKLTYHIRKHTGENLETCPVCSKLFTSGCALREHMKIHVAKKELVKCPLCDKKYQDERYMLRHLRTTHAGAQHACPLCHKLLTSAPGLRHHVLTHSALNMFHCKCCPKSYAIKRTMIRHLRKRHGLKGTEINIKDFFRRLDPRECQLGLDDDTMANIFGPPKKVMSDALLADYMNLANLYRNNIKEDADTEKESDDDDSDDASLQTLKKDYNNPDPESSRIEKVTIKQETVTTDVELEPTDFVSVKIEPYDENECE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01147680;
90% Identity: -
80% Identity: -